RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 COL5A1P20908 1838 aaPredicted RBP4.24□□□□□ -1.73
HMGB4-202ENST00000458277 IGLV2-18A0A075B6J9 118 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 A0A0J9YXY3 114 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 LILRA5A6NI73 299 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 LMO7DNF2Z398 122 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 M0R1B8 84 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 LEPROTO15243 131 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 TRIAP1O43715 76 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 SS18L1O75177 396 aaPredicted RBP4.24□□□□□ -1.73
HMGB4-202ENST00000458277 RNASE2P10153 161 aaKnown RBP4.24□□□□□ -1.73
HMGB4-202ENST00000458277 BRWD1-AS2P59051 145 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 FAM27E3Q08E93 113 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 RHOHQ15669 191 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 WFDC11Q8NEX6 87 aa4.24□□□□□ -1.73
HMGB4-202ENST00000458277 BBC3Q96PG8 261 aaPredicted RBP4.24□□□□□ -1.73
HMGB4-202ENST00000458277 MPDZO75970 2070 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 UNC80Q8N2C7 3258 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 C12orf77C9JDV5 145 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 H3BTX0 84 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 M0R381 172 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 NDUFS5O43920 106 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 TIMM17BO60830 172 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 ZNF32P17041 273 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 XCL1P47992 114 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 RBM3P98179 157 aaKnown RBP4.23□□□□□ -1.73
HMGB4-202ENST00000458277 FOXF2Q12947 444 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 C9orf139Q6ZV77 190 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 DYNAPQ8N1N2 210 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 FGFBP3Q8TAT2 258 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 ZNF524Q96C55 264 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 SMIM2Q9BVW6 85 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 ZNF71Q9NQZ8 489 aaPredicted RBP4.23□□□□□ -1.73
HMGB4-202ENST00000458277 XCL2Q9UBD3 114 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 RNF7Q9UBF6 113 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 MYO7AQ13402 2215 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 TCF20Q9UGU0 1960 aaKnown RBP4.23□□□□□ -1.73
HMGB4-202ENST00000458277 SHANK1Q9Y566 2161 aa4.23□□□□□ -1.73
HMGB4-202ENST00000458277 CACNA1CQ13936 2221 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 IGKV3D-11A0A0A0MRZ8 115 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 PRSS38A1L453 326 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 CGB1A6NKQ9 187 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 COX7A2LO14548 114 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 FSTL3O95633 263 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 IGLV2-11P01706 119 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 IGHV3-13P01766 116 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 BEAN1Q3B7T3 259 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 PMS2CLQ68D20 193 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 RNF185Q96GF1 192 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 TIMM17AQ99595 171 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 HES7Q9BYE0 225 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 SPTBP11277 2137 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 A0A0C4DFX4 3053 aa4.22□□□□□ -1.73
HMGB4-202ENST00000458277 IGHV4-4A0A075B6R2 117 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 IGKV1OR2-108A0A075B7D4 117 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 TRAV8-3A0A0A6YYJ7 113 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 TRAV13-2A0A0B4J235 113 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 SH2D1AO60880 128 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 CCKP06307 115 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 PLA2G5P39877 138 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 CIRBPQ14011 172 aaKnown RBP4.21□□□□□ -1.74
HMGB4-202ENST00000458277 PCOLCEQ15113 449 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 PATE2Q6UY27 113 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 DAZ4Q86SG3 579 aaKnown RBP4.21□□□□□ -1.74
HMGB4-202ENST00000458277 MUSTN1Q8IVN3 82 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 DEFB123Q8N688 67 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 CD177Q8N6Q3 437 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 Q96MF0 132 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 C11orf68Q9H3H3 251 aaKnown RBP4.21□□□□□ -1.74
HMGB4-202ENST00000458277 UBE2D4Q9Y2X8 147 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 MOB4Q9Y3A3 225 aa4.21□□□□□ -1.74
HMGB4-202ENST00000458277 MYO9BQ13459 2157 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 TANC2Q9HCD6 1990 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 CACNA1IQ9P0X4 2223 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 IBA57-AS1B1ANH7 110 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 H7BZZ5 65 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 H7C2G1 150 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 UBE2L6O14933 153 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 ERC2-IT1O76042 136 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 ZNF80P51504 273 aaPredicted RBP4.2□□□□□ -1.74
HMGB4-202ENST00000458277 ZNF134P52741 427 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 FXYD7P58549 80 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 SNRPD3P62318 126 aaKnown RBP4.2□□□□□ -1.74
HMGB4-202ENST00000458277 KHDC1LQ5JSQ8 128 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 LY6G5CQ5SRR4 150 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.2□□□□□ -1.74
HMGB4-202ENST00000458277 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 C2orf66Q6UXQ4 117 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 C16orf47Q6ZP98 133 aaPredicted RBP4.2□□□□□ -1.74
HMGB4-202ENST00000458277 FP248Q71RG6 208 aaPredicted RBP4.2□□□□□ -1.74
HMGB4-202ENST00000458277 SMCR5Q8TEV8 140 aa4.2□□□□□ -1.74
HMGB4-202ENST00000458277 DAZ3Q9NR90 486 aaKnown RBP4.2□□□□□ -1.74
HMGB4-202ENST00000458277 SPTBN5Q9NRC6 3674 aaKnown RBP4.2□□□□□ -1.74
HMGB4-202ENST00000458277 LRP4O75096 1905 aa4.19□□□□□ -1.74
HMGB4-202ENST00000458277 IGHV1OR21-1A0A087WYE8 117 aa4.19□□□□□ -1.74
HMGB4-202ENST00000458277 TRBV27A0A0K0K1C4 114 aa4.19□□□□□ -1.74
HMGB4-202ENST00000458277 SOCS3O14543 225 aa4.19□□□□□ -1.74
HMGB4-202ENST00000458277 LINC01565O15544 149 aa4.19□□□□□ -1.74
HMGB4-202ENST00000458277 IGHV1-69P01742 117 aa4.19□□□□□ -1.74
HMGB4-202ENST00000458277 IGHV4-34P06331 123 aa4.19□□□□□ -1.74
HMGB4-202ENST00000458277 BAALC-AS2P0C853 105 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms