RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 OR10AG1Q8NH19 301 aa9.05□□□□□ -0.96
SYNE2-207ENST00000458046 VGLL1Q99990 258 aa9.05□□□□□ -0.96
SYNE2-207ENST00000458046 TMEM126AQ9H061 195 aa9.05□□□□□ -0.96
SYNE2-207ENST00000458046 MRPL16Q9NX20 251 aaKnown RBP9.05□□□□□ -0.96
SYNE2-207ENST00000458046 ODF3BA8MYP8 253 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 EGR2P11161 476 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-207ENST00000458046 ZNF80P51504 273 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-207ENST00000458046 PDE6HQ13956 83 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 BVES-AS1Q5T3Y7 98 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 LINC01545Q5VT33 79 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 VMO1Q7Z5L0 202 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 OR2K2Q8NGT1 345 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 PRELID3AQ96N28 172 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 ZFHX3Q15911 3703 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 CTSGP08311 255 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 Q6AWC8 147 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 TTC9CQ8N5M4 171 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 SMAD5-AS1Q9Y6J3 95 aa9.04□□□□□ -0.96
SYNE2-207ENST00000458046 A0A096LNJ9 63 aa9.03□□□□□ -0.96
SYNE2-207ENST00000458046 M0R1W7 72 aa9.03□□□□□ -0.96
SYNE2-207ENST00000458046 PSG9Q00887 426 aa9.03□□□□□ -0.96
SYNE2-207ENST00000458046 TWIST1Q15672 202 aa9.03□□□□□ -0.96
SYNE2-207ENST00000458046 FAM104BQ5XKR9 115 aa9.03□□□□□ -0.96
SYNE2-207ENST00000458046 ZFAND6Q6FIF0 208 aa9.03□□□□□ -0.96
SYNE2-207ENST00000458046 ZNF493Q6ZR52 646 aa9.03□□□□□ -0.96
SYNE2-207ENST00000458046 EEF1AKMT3Q96AZ1 226 aa9.03□□□□□ -0.96
SYNE2-207ENST00000458046 EMP1P54849 157 aa9.03□□□□□ -0.96
SYNE2-207ENST00000458046 MRPL51Q4U2R6 128 aaKnown RBP9.03□□□□□ -0.96
SYNE2-207ENST00000458046 TAX1BP3O14907 124 aa9.02□□□□□ -0.97
SYNE2-207ENST00000458046 ZFP36P26651 326 aaKnown RBP9.02□□□□□ -0.97
SYNE2-207ENST00000458046 IGHV3-66A0A0C4DH42 116 aa9.02□□□□□ -0.97
SYNE2-207ENST00000458046 FABP5P3A8MUU1 101 aa9.02□□□□□ -0.97
SYNE2-207ENST00000458046 NDUFS7O75251 213 aa9.02□□□□□ -0.97
SYNE2-207ENST00000458046 CRLF1O75462 422 aa9.02□□□□□ -0.97
SYNE2-207ENST00000458046 SUMO2P61956 95 aaKnown RBP9.02□□□□□ -0.97
SYNE2-207ENST00000458046 ERCC8Q13216 396 aa9.02□□□□□ -0.97
SYNE2-207ENST00000458046 FBXL19-AS1Q494R0 122 aa9.02□□□□□ -0.97
SYNE2-207ENST00000458046 ORMDL3Q8N138 153 aa9.02□□□□□ -0.97
SYNE2-207ENST00000458046 MSRB1Q9NZV6 116 aa9.02□□□□□ -0.97
SYNE2-207ENST00000458046 RABAC1Q9UI14 185 aa9.02□□□□□ -0.97
SYNE2-207ENST00000458046 CKS2P33552 79 aa9.01□□□□□ -0.97
SYNE2-207ENST00000458046 C2orf48Q96LS8 159 aa9.01□□□□□ -0.97
SYNE2-207ENST00000458046 C1QTNF4Q9BXJ3 329 aa9.01□□□□□ -0.97
SYNE2-207ENST00000458046 SPTBN1Q01082 2364 aaKnown RBP9.01□□□□□ -0.97
SYNE2-207ENST00000458046 IGHV3OR16-13A0A075B7E8 117 aa9.01□□□□□ -0.97
SYNE2-207ENST00000458046 IGHV7-81A0A0B4J1V7 117 aa9.01□□□□□ -0.97
SYNE2-207ENST00000458046 IGHV3-74A0A0B4J1X5 117 aa9.01□□□□□ -0.97
SYNE2-207ENST00000458046 GPR183P32249 361 aa9.01□□□□□ -0.97
SYNE2-207ENST00000458046 NEGR1Q7Z3B1 354 aa9.01□□□□□ -0.97
SYNE2-207ENST00000458046 FER1L6-AS1Q8NA97 138 aa9.01□□□□□ -0.97
SYNE2-207ENST00000458046 RHOGP84095 191 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 POLQO75417 2590 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 AKAP6Q13023 2319 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 PRAC2D3DTV9 90 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 NPYP01303 97 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 COX8AP10176 69 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 ECSCRQ19T08 205 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 Q75L30 129 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 ZNF575Q86XF7 245 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 DEFB125Q8N687 156 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 RNF182Q8N6D2 247 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 Q8N6K4 173 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 ZNF418Q8TF45 676 aaPredicted RBP9□□□□□ -0.97
SYNE2-207ENST00000458046 U3KQK5 164 aa9□□□□□ -0.97
SYNE2-207ENST00000458046 FAM240AA0A1B0GVK7 77 aa8.99□□□□□ -0.97
SYNE2-207ENST00000458046 GAS8-AS1O95177 125 aa8.99□□□□□ -0.97
SYNE2-207ENST00000458046 CACNG7P62955 275 aa8.99□□□□□ -0.97
SYNE2-207ENST00000458046 C11orf71Q6IPW1 123 aa8.99□□□□□ -0.97
SYNE2-207ENST00000458046 C2orf91Q6ZV80 131 aa8.99□□□□□ -0.97
SYNE2-207ENST00000458046 TMEM190Q8WZ59 177 aa8.99□□□□□ -0.97
SYNE2-207ENST00000458046 TRIAP1O43715 76 aa8.99□□□□□ -0.97
SYNE2-207ENST00000458046 C15orf32Q32M92 178 aa8.99□□□□□ -0.97
SYNE2-207ENST00000458046 AMMECR1LQ6DCA0 310 aa8.99□□□□□ -0.97
SYNE2-207ENST00000458046 Q8N9W7 124 aa8.99□□□□□ -0.97
SYNE2-207ENST00000458046 SPG11Q96JI7 2443 aa8.99□□□□□ -0.97
SYNE2-207ENST00000458046 IGHV3-49A0A0A0MS15 119 aa8.98□□□□□ -0.97
SYNE2-207ENST00000458046 J3KT08 172 aa8.98□□□□□ -0.97
SYNE2-207ENST00000458046 APOC4P55056 127 aa8.98□□□□□ -0.97
SYNE2-207ENST00000458046 LAGE3Q14657 143 aa8.98□□□□□ -0.97
SYNE2-207ENST00000458046 LOC107984640A0A0U1RRK4 108 aa8.98□□□□□ -0.97
SYNE2-207ENST00000458046 DLX4Q92988 240 aaPredicted RBP8.98□□□□□ -0.97
SYNE2-207ENST00000458046 C18orf15Q96N68 181 aa8.98□□□□□ -0.97
SYNE2-207ENST00000458046 VPS13CQ709C8 3753 aa8.98□□□□□ -0.97
SYNE2-207ENST00000458046 CELSR1Q9NYQ6 3014 aa8.98□□□□□ -0.97
SYNE2-207ENST00000458046 LINC01548A6NM66 108 aa8.98□□□□□ -0.97
SYNE2-207ENST00000458046 HBDP02042 147 aa8.98□□□□□ -0.97
SYNE2-207ENST00000458046 A0A1W2PPR1 153 aa8.97□□□□□ -0.97
SYNE2-207ENST00000458046 G3V318 75 aa8.97□□□□□ -0.97
SYNE2-207ENST00000458046 IGLC6P0CF74 106 aa8.97□□□□□ -0.97
SYNE2-207ENST00000458046 EVI2AP22794 236 aa8.97□□□□□ -0.97
SYNE2-207ENST00000458046 EBI3Q14213 229 aa8.97□□□□□ -0.97
SYNE2-207ENST00000458046 HRCT1Q6UXD1 115 aa8.97□□□□□ -0.97
SYNE2-207ENST00000458046 CLEC19AQ6UXS0 136 aa8.97□□□□□ -0.97
SYNE2-207ENST00000458046 IFI27L1Q96BM0 104 aa8.97□□□□□ -0.97
SYNE2-207ENST00000458046 ATP6V0E1O15342 81 aa8.96□□□□□ -0.97
SYNE2-207ENST00000458046 CD5LO43866 347 aa8.96□□□□□ -0.97
SYNE2-207ENST00000458046 PAX8Q06710 450 aa8.96□□□□□ -0.97
SYNE2-207ENST00000458046 PAPPA-AS1Q5QFB9 102 aa8.96□□□□□ -0.97
SYNE2-207ENST00000458046 MINOS1Q5TGZ0 78 aa8.96□□□□□ -0.97
SYNE2-207ENST00000458046 DKK2Q9UBU2 259 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms