RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 CRIP1P50238 77 aa12.63□□□□□ -0.39
LSS-205ENST00000457828 CEND1Q8N111 149 aa12.63□□□□□ -0.39
LSS-205ENST00000457828 F8P00451 2351 aa12.63□□□□□ -0.39
LSS-205ENST00000457828 NEGR1Q7Z3B1 354 aa12.63□□□□□ -0.39
LSS-205ENST00000457828 ADAMTS20P59510 1910 aa12.63□□□□□ -0.39
LSS-205ENST00000457828 PTPRBP23467 1997 aa12.63□□□□□ -0.39
LSS-205ENST00000457828 PRAC2D3DTV9 90 aa12.63□□□□□ -0.39
LSS-205ENST00000457828 LINC01619G3V211 115 aa12.63□□□□□ -0.39
LSS-205ENST00000457828 SH2D6Q7Z4S9 175 aa12.63□□□□□ -0.39
LSS-205ENST00000457828 AGPAT4-IT1Q9H0P7 198 aa12.63□□□□□ -0.39
LSS-205ENST00000457828 PPP1R17O96001 155 aa12.62□□□□□ -0.39
LSS-205ENST00000457828 FOXE3Q13461 319 aa12.62□□□□□ -0.39
LSS-205ENST00000457828 DUSP14O95147 198 aaKnown RBP12.62□□□□□ -0.39
LSS-205ENST00000457828 RPL13AP40429 203 aaKnown RBP12.62□□□□□ -0.39
LSS-205ENST00000457828 C2orf66Q6UXQ4 117 aa12.62□□□□□ -0.39
LSS-205ENST00000457828 DPH3P1Q9H4G8 78 aa12.62□□□□□ -0.39
LSS-205ENST00000457828 FCN3O75636 299 aa12.62□□□□□ -0.39
LSS-205ENST00000457828 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
LSS-205ENST00000457828 C8orf86Q6ZUL3 223 aa12.62□□□□□ -0.39
LSS-205ENST00000457828 IGHV7-81A0A0B4J1V7 117 aa12.61□□□□□ -0.39
LSS-205ENST00000457828 INAFM1C9JVW0 142 aa12.61□□□□□ -0.39
LSS-205ENST00000457828 IGLV2-11P01706 119 aa12.61□□□□□ -0.39
LSS-205ENST00000457828 AZU1P20160 251 aa12.61□□□□□ -0.39
LSS-205ENST00000457828 SUMO2P61956 95 aaKnown RBP12.61□□□□□ -0.39
LSS-205ENST00000457828 DEFB136Q30KP8 78 aa12.61□□□□□ -0.39
LSS-205ENST00000457828 RPL35AP18077 110 aaKnown RBP12.61□□□□□ -0.39
LSS-205ENST00000457828 TRAV2A0A0B4J234 112 aa12.6□□□□□ -0.39
LSS-205ENST00000457828 C2orf91Q6ZV80 131 aa12.6□□□□□ -0.39
LSS-205ENST00000457828 A0A087WWL8 130 aa12.6□□□□□ -0.39
LSS-205ENST00000457828 LINC01549A6NIU2 74 aa12.6□□□□□ -0.39
LSS-205ENST00000457828 CTSGP08311 255 aa12.6□□□□□ -0.39
LSS-205ENST00000457828 IGLV11-55A0A075B6I3 123 aa12.6□□□□□ -0.39
LSS-205ENST00000457828 Q8N9W7 124 aa12.6□□□□□ -0.39
LSS-205ENST00000457828 OVOL1O14753 267 aa12.6□□□□□ -0.39
LSS-205ENST00000457828 C12orf74Q32Q52 190 aa12.6□□□□□ -0.39
LSS-205ENST00000457828 DLX4Q92988 240 aaPredicted RBP12.6□□□□□ -0.39
LSS-205ENST00000457828 TNRC6BQ9UPQ9 1833 aaKnown RBP12.59□□□□□ -0.39
LSS-205ENST00000457828 F8VRH5 84 aa12.59□□□□□ -0.39
LSS-205ENST00000457828 WFDC2Q14508 124 aa12.59□□□□□ -0.39
LSS-205ENST00000457828 TCTEX1D4Q5JR98 221 aa12.59□□□□□ -0.39
LSS-205ENST00000457828 C9orf139Q6ZV77 190 aa12.59□□□□□ -0.39
LSS-205ENST00000457828 SMIM2Q9BVW6 85 aa12.59□□□□□ -0.39
LSS-205ENST00000457828 PRADC1Q9BSG0 188 aa12.59□□□□□ -0.39
LSS-205ENST00000457828 GAGE12HA6NDE8 117 aa12.58□□□□□ -0.39
LSS-205ENST00000457828 LY6G5BQ8NDX9 201 aa12.58□□□□□ -0.39
LSS-205ENST00000457828 MGAQ8IWI9 3026 aa12.58□□□□□ -0.4
LSS-205ENST00000457828 TRAV8-2A0A0B4J237 113 aa12.58□□□□□ -0.4
LSS-205ENST00000457828 ODF1Q14990 250 aa12.58□□□□□ -0.4
LSS-205ENST00000457828 MYO15AQ9UKN7 3530 aa12.58□□□□□ -0.4
LSS-205ENST00000457828 HELZ2Q9BYK8 2649 aaKnown RBP12.58□□□□□ -0.4
LSS-205ENST00000457828 WI2-2373I1.2A0A1W2PRP0 233 aa12.58□□□□□ -0.4
LSS-205ENST00000457828 DEFB131AP59861 70 aa12.58□□□□□ -0.4
LSS-205ENST00000457828 ZNF493Q6ZR52 646 aa12.58□□□□□ -0.4
LSS-205ENST00000457828 FANCD2OSQ96PS1 177 aa12.58□□□□□ -0.4
LSS-205ENST00000457828 TRGV2A0A075B6R0 118 aa12.58□□□□□ -0.4
LSS-205ENST00000457828 CKS1BP61024 79 aa12.58□□□□□ -0.4
LSS-205ENST00000457828 EYSQ5T1H1 3165 aa12.57□□□□□ -0.4
LSS-205ENST00000457828 COL6A3P12111 3177 aa12.57□□□□□ -0.4
LSS-205ENST00000457828 MYMXA0A1B0GTQ4 84 aa12.57□□□□□ -0.4
LSS-205ENST00000457828 A8MWV9 139 aa12.57□□□□□ -0.4
LSS-205ENST00000457828 PAPPA-AS1Q5QFB9 102 aa12.57□□□□□ -0.4
LSS-205ENST00000457828 F8W1H4 67 aa12.57□□□□□ -0.4
LSS-205ENST00000457828 A0A087WX48 190 aa12.56□□□□□ -0.4
LSS-205ENST00000457828 TRAV12-3A0A0B4J271 114 aa12.56□□□□□ -0.4
LSS-205ENST00000457828 COX6CP09669 75 aa12.56□□□□□ -0.4
LSS-205ENST00000457828 IGKV2D-26A0A0A0MRZ7 120 aa12.56□□□□□ -0.4
LSS-205ENST00000457828 TNFRSF13BO14836 293 aaPredicted RBP12.56□□□□□ -0.4
LSS-205ENST00000457828 C5orf56Q8N8D9 126 aa12.56□□□□□ -0.4
LSS-205ENST00000457828 IGLL5B9A064 214 aa12.55□□□□□ -0.4
LSS-205ENST00000457828 LINC00477Q96M19 166 aa12.55□□□□□ -0.4
LSS-205ENST00000457828 CMC4P56277 68 aaPredicted RBP12.55□□□□□ -0.4
LSS-205ENST00000457828 NPBQ8NG41 125 aa12.55□□□□□ -0.4
LSS-205ENST00000457828 UBE2E2Q96LR5 201 aa12.55□□□□□ -0.4
LSS-205ENST00000457828 TP53TG1Q9Y2A0 90 aa12.55□□□□□ -0.4
LSS-205ENST00000457828 G3V4G9 280 aa12.55□□□□□ -0.4
LSS-205ENST00000457828 ANXA2RQ3ZCQ2 193 aa12.55□□□□□ -0.4
LSS-205ENST00000457828 TRBV6-1A0A0K0K1D8 114 aa12.55□□□□□ -0.4
LSS-205ENST00000457828 MRAP2Q96G30 205 aa12.55□□□□□ -0.4
LSS-205ENST00000457828 F6UB75 175 aa12.54□□□□□ -0.4
LSS-205ENST00000457828 HLA-DRB4P13762 266 aa12.54□□□□□ -0.4
LSS-205ENST00000457828 VCX2Q9H322 139 aa12.54□□□□□ -0.4
LSS-205ENST00000457828 HLA-DRB4X5D2U9 266 aa12.54□□□□□ -0.4
LSS-205ENST00000457828 TTC32Q5I0X7 151 aa12.54□□□□□ -0.4
LSS-205ENST00000457828 DNAJC9-AS1A6NH13 148 aa12.54□□□□□ -0.4
LSS-205ENST00000457828 CCL24O00175 119 aa12.54□□□□□ -0.4
LSS-205ENST00000457828 NDUFA4O00483 81 aa12.53□□□□□ -0.4
LSS-205ENST00000457828 SPINK8P0C7L1 97 aa12.53□□□□□ -0.4
LSS-205ENST00000457828 RPL39LQ96EH5 51 aaKnown RBP12.53□□□□□ -0.4
LSS-205ENST00000457828 BUB3O43684 328 aa12.53□□□□□ -0.4
LSS-205ENST00000457828 FSTL3O95633 263 aa12.53□□□□□ -0.4
LSS-205ENST00000457828 CRYGBP07316 175 aa12.53□□□□□ -0.4
LSS-205ENST00000457828 DEFB1P60022 68 aa12.53□□□□□ -0.4
LSS-205ENST00000457828 NBEAQ8NFP9 2946 aa12.53□□□□□ -0.4
LSS-205ENST00000457828 SNCGO76070 127 aa12.53□□□□□ -0.4
LSS-205ENST00000457828 LY6G6DO95868 133 aa12.53□□□□□ -0.4
LSS-205ENST00000457828 HOXD3P31249 432 aaPredicted RBP12.53□□□□□ -0.4
LSS-205ENST00000457828 FRYLO94915 3013 aa12.53□□□□□ -0.4
LSS-205ENST00000457828 GAS8-AS1O95177 125 aa12.52□□□□□ -0.4
LSS-205ENST00000457828 GEMIN7Q9H840 131 aaKnown RBP12.52□□□□□ -0.4
LSS-205ENST00000457828 NACAE9PAV3 2078 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms