RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ZMAT4Q9H898 229 aa10.48□□□□□ -0.73
TOP3B-213ENST00000457179 TMEM75Q8N9X5 138 aa10.47□□□□□ -0.73
TOP3B-213ENST00000457179 CARD19Q96LW7 228 aa10.47□□□□□ -0.73
TOP3B-213ENST00000457179 UBR5O95071 2799 aaPredicted RBP10.47□□□□□ -0.73
TOP3B-213ENST00000457179 IGHV4-38-2P0DP08 117 aa10.47□□□□□ -0.73
TOP3B-213ENST00000457179 Q8TAT8 98 aa10.47□□□□□ -0.73
TOP3B-213ENST00000457179 PIFOQ8TCI5 191 aa10.47□□□□□ -0.73
TOP3B-213ENST00000457179 RNF125Q96EQ8 232 aa10.47□□□□□ -0.73
TOP3B-213ENST00000457179 SRSF1Q07955 248 aaKnown RBP eCLIP10.47□□□□□ -0.738e-10■■■□□ 14.6
TOP3B-213ENST00000457179 TRBV19A0A075B6N1 114 aa10.46□□□□□ -0.73
TOP3B-213ENST00000457179 IGKV2-40A0A087WW87 121 aaPredicted RBP10.46□□□□□ -0.73
TOP3B-213ENST00000457179 TNFRSF6BO95407 300 aa10.46□□□□□ -0.73
TOP3B-213ENST00000457179 IGKV2D-40P01614 121 aaPredicted RBP10.46□□□□□ -0.73
TOP3B-213ENST00000457179 HIVEP2P31629 2446 aa10.46□□□□□ -0.73
TOP3B-213ENST00000457179 ZNF491Q8N8L2 437 aa10.46□□□□□ -0.74
TOP3B-213ENST00000457179 SIRPDQ9H106 197 aa10.46□□□□□ -0.74
TOP3B-213ENST00000457179 KLK15Q9H2R5 256 aa10.46□□□□□ -0.74
TOP3B-213ENST00000457179 TRBV7-3A0A075B6L6 115 aa10.45□□□□□ -0.74
TOP3B-213ENST00000457179 CENPVL3A0A0U1RRI6 287 aa10.45□□□□□ -0.74
TOP3B-213ENST00000457179 HLA-DRB4P13762 266 aa10.45□□□□□ -0.74
TOP3B-213ENST00000457179 PPDPFLQ8WWR9 84 aa10.45□□□□□ -0.74
TOP3B-213ENST00000457179 PIMREGQ9BSJ6 248 aa10.45□□□□□ -0.74
TOP3B-213ENST00000457179 HLA-DRB4X5D2U9 266 aa10.45□□□□□ -0.74
TOP3B-213ENST00000457179 ATP5LO75964 103 aa10.45□□□□□ -0.74
TOP3B-213ENST00000457179 EGR2P11161 476 aaPredicted RBP10.45□□□□□ -0.74
TOP3B-213ENST00000457179 SIGLEC15Q6ZMC9 328 aa10.45□□□□□ -0.74
TOP3B-213ENST00000457179 IGKV3-7A0A075B6H7 116 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 ODF3BA8MYP8 253 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 CCDC179H3BU77 68 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 ATP6V0E1O15342 81 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 ORM1P02763 201 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 TAL2Q16559 108 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 ATP6V0E2Q8NHE4 81 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 MYOZ3Q8TDC0 251 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 NPFFO15130 113 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 DUX5Q96PT3 197 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 HIF1ANQ9NWT6 349 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 ZNF469Q96JG9 3925 aaPredicted RBP10.44□□□□□ -0.74
TOP3B-213ENST00000457179 HLA-DMBP28068 263 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 SRSF9Q13242 221 aaKnown RBP eCLIP10.44□□□□□ -0.74
TOP3B-213ENST00000457179 SCGB1D4Q6XE38 83 aa10.44□□□□□ -0.74
TOP3B-213ENST00000457179 GCN1Q92616 2671 aaKnown RBP10.43□□□□□ -0.74
TOP3B-213ENST00000457179 IGHV7-81A0A0B4J1V7 117 aa10.43□□□□□ -0.74
TOP3B-213ENST00000457179 KRTAP10-9P60411 292 aa10.43□□□□□ -0.74
TOP3B-213ENST00000457179 RPL32P62910 135 aaKnown RBP10.43□□□□□ -0.74
TOP3B-213ENST00000457179 C15orf32Q32M92 178 aa10.43□□□□□ -0.74
TOP3B-213ENST00000457179 TEN1Q86WV5 123 aa10.43□□□□□ -0.74
TOP3B-213ENST00000457179 FANCD2OSQ96PS1 177 aa10.43□□□□□ -0.74
TOP3B-213ENST00000457179 SHANK2-AS3Q9BTD1 123 aa10.43□□□□□ -0.74
TOP3B-213ENST00000457179 UBE2E1P51965 193 aa10.43□□□□□ -0.74
TOP3B-213ENST00000457179 PSMG4Q5JS54 123 aa10.43□□□□□ -0.74
TOP3B-213ENST00000457179 RNF185Q96GF1 192 aa10.43□□□□□ -0.74
TOP3B-213ENST00000457179 NXT2Q9NPJ8 142 aaKnown RBP10.43□□□□□ -0.74
TOP3B-213ENST00000457179 C21orf62Q9NYP8 219 aa10.43□□□□□ -0.74
TOP3B-213ENST00000457179 TRAV26-2A0A0B4J265 109 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 SCGB2A1O75556 95 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 CLEC3BP05452 202 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 ZNF688P0C7X2 276 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 NHLRC4P0CG21 123 aaPredicted RBP10.42□□□□□ -0.74
TOP3B-213ENST00000457179 PVRIGQ6DKI7 326 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 MYMXA0A1B0GTQ4 84 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 H3BRN7 92 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 IGHV3-11P01762 117 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 CLEC19AQ6UXS0 136 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 NIPBLQ6KC79 2804 aaeCLIP10.42□□□□□ -0.742e-6■■■■□ 19.3
TOP3B-213ENST00000457179 ANKRD29Q8N6D5 301 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 Q8N9W7 124 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 AJUBAQ96IF1 538 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 AAMDCQ9H7C9 122 aa10.42□□□□□ -0.74
TOP3B-213ENST00000457179 ZNF80P51504 273 aaPredicted RBP10.41□□□□□ -0.74
TOP3B-213ENST00000457179 MFAP4P55083 255 aa10.41□□□□□ -0.74
TOP3B-213ENST00000457179 TMEM14CQ9P0S9 112 aa10.41□□□□□ -0.74
TOP3B-213ENST00000457179 H3BUX3 64 aa10.41□□□□□ -0.74
TOP3B-213ENST00000457179 SCGB1C2P0DMR2 95 aa10.41□□□□□ -0.74
TOP3B-213ENST00000457179 GAGE2BQ13066 116 aa10.41□□□□□ -0.74
TOP3B-213ENST00000457179 GAGE2EQ4V326 116 aa10.41□□□□□ -0.74
TOP3B-213ENST00000457179 ZNF843Q8N446 348 aa10.41□□□□□ -0.74
TOP3B-213ENST00000457179 GAGE2DQ9UEU5 116 aa10.41□□□□□ -0.74
TOP3B-213ENST00000457179 TRAV8-2A0A0B4J237 113 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 A8MWV9 139 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 TCL1BO95988 128 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 AVPP01185 164 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 COX6B1P14854 86 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 TMEM95Q3KNT9 176 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 FN1P02751 2386 aaKnown RBP10.4□□□□□ -0.74
TOP3B-213ENST00000457179 GAGE12JA6NER3 117 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 GAGE7O76087 117 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 GAGE12FP0CL80 117 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 GAGE12GP0CL81 117 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 GAGE12IP0CL82 117 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 BLCAPP62952 87 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 GAGE4Q13068 117 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 TTC32Q5I0X7 151 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 C3orf56Q8N813 242 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 UNC79Q9P2D8 2635 aa10.4□□□□□ -0.74
TOP3B-213ENST00000457179 SNCGO76070 127 aa10.39□□□□□ -0.75
TOP3B-213ENST00000457179 LGALS1P09382 135 aaKnown RBP10.39□□□□□ -0.75
TOP3B-213ENST00000457179 TMEM78Q5T7P6 136 aa10.39□□□□□ -0.75
TOP3B-213ENST00000457179 A0A087WX48 190 aa10.39□□□□□ -0.75
TOP3B-213ENST00000457179 TRAV4A0A0B4J268 109 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms