RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 H2AFB1P0C5Y9 115 aa11.12□□□□□ -0.63
CPSF6-203ENST00000456847 CFAP126Q5VTH2 177 aa11.12□□□□□ -0.63
CPSF6-203ENST00000456847 CIDEAO60543 219 aa11.11□□□□□ -0.63
CPSF6-203ENST00000456847 SH2D1AO60880 128 aa11.11□□□□□ -0.63
CPSF6-203ENST00000456847 FAM162BQ5T6X4 162 aa11.11□□□□□ -0.63
CPSF6-203ENST00000456847 LGALSLQ3ZCW2 172 aaPredicted RBP11.11□□□□□ -0.63
CPSF6-203ENST00000456847 PTH2Q96A98 100 aa11.11□□□□□ -0.63
CPSF6-203ENST00000456847 PRADC1Q9BSG0 188 aa11.11□□□□□ -0.63
CPSF6-203ENST00000456847 TRBV6-1A0A0K0K1D8 114 aa11.1□□□□□ -0.63
CPSF6-203ENST00000456847 H3BVH4 76 aa11.1□□□□□ -0.63
CPSF6-203ENST00000456847 LINC00315P59091 139 aa11.1□□□□□ -0.63
CPSF6-203ENST00000456847 RHOHQ15669 191 aa11.1□□□□□ -0.63
CPSF6-203ENST00000456847 SH2D6Q7Z4S9 175 aa11.1□□□□□ -0.63
CPSF6-203ENST00000456847 SCO2A0A1W2PP80 73 aa11.09□□□□□ -0.63
CPSF6-203ENST00000456847 LTAP01374 205 aa11.09□□□□□ -0.63
CPSF6-203ENST00000456847 ZNF575Q86XF7 245 aa11.09□□□□□ -0.63
CPSF6-203ENST00000456847 SLC25A29Q8N8R3 303 aa11.09□□□□□ -0.63
CPSF6-203ENST00000456847 GRIFINA4D1Z8 144 aa11.09□□□□□ -0.63
CPSF6-203ENST00000456847 KRBOX1C9JBD0 128 aa11.09□□□□□ -0.63
CPSF6-203ENST00000456847 BTF3P20290 206 aaKnown RBP11.09□□□□□ -0.63
CPSF6-203ENST00000456847 CRIP1P50238 77 aa11.09□□□□□ -0.63
CPSF6-203ENST00000456847 EIF5AL1Q6IS14 154 aaKnown RBP11.09□□□□□ -0.63
CPSF6-203ENST00000456847 WFDC10BQ8IUB3 73 aa11.09□□□□□ -0.63
CPSF6-203ENST00000456847 TCTE3Q8IZS6 198 aa11.09□□□□□ -0.63
CPSF6-203ENST00000456847 IL36BQ9NZH7 164 aa11.09□□□□□ -0.63
CPSF6-203ENST00000456847 LY96Q9Y6Y9 160 aa11.09□□□□□ -0.63
CPSF6-203ENST00000456847 TMSB15BA0A087X1C1 80 aa11.08□□□□□ -0.64
CPSF6-203ENST00000456847 TRBV6-4A0A1B0GX49 114 aa11.08□□□□□ -0.64
CPSF6-203ENST00000456847 A8MWV9 139 aa11.08□□□□□ -0.64
CPSF6-203ENST00000456847 S100A9P06702 114 aaKnown RBP11.08□□□□□ -0.64
CPSF6-203ENST00000456847 COX8CQ7Z4L0 72 aa11.08□□□□□ -0.64
CPSF6-203ENST00000456847 SYT8Q8NBV8 401 aa11.08□□□□□ -0.64
CPSF6-203ENST00000456847 TRAV9-2A0A087WT02 112 aa11.07□□□□□ -0.64
CPSF6-203ENST00000456847 MGST1P10620 155 aaKnown RBP11.07□□□□□ -0.64
CPSF6-203ENST00000456847 PARLQ9H300 379 aa11.07□□□□□ -0.64
CPSF6-203ENST00000456847 ZNF674Q2M3X9 581 aa11.07□□□□□ -0.64
CPSF6-203ENST00000456847 GNG13Q9P2W3 67 aa11.07□□□□□ -0.64
CPSF6-203ENST00000456847 PKD1P98161 4303 aa11.06□□□□□ -0.64
CPSF6-203ENST00000456847 C16orf90A8MZG2 172 aa11.06□□□□□ -0.64
CPSF6-203ENST00000456847 TEX46H3BTG2 121 aa11.06□□□□□ -0.64
CPSF6-203ENST00000456847 ARMS2P0C7Q2 107 aa11.06□□□□□ -0.64
CPSF6-203ENST00000456847 MED14OSP0DP75 135 aa11.06□□□□□ -0.64
CPSF6-203ENST00000456847 EVI2AP22794 236 aa11.06□□□□□ -0.64
CPSF6-203ENST00000456847 RAB5CP51148 216 aa11.06□□□□□ -0.64
CPSF6-203ENST00000456847 LINC01559Q495D7 138 aa11.06□□□□□ -0.64
CPSF6-203ENST00000456847 MANBALQ9NQG1 85 aa11.06□□□□□ -0.64
CPSF6-203ENST00000456847 PIK3CD-AS1Q5SR53 167 aa11.05□□□□□ -0.64
CPSF6-203ENST00000456847 DNLZQ5SXM8 178 aa11.05□□□□□ -0.64
CPSF6-203ENST00000456847 PHLDA3Q9Y5J5 127 aa11.05□□□□□ -0.64
CPSF6-203ENST00000456847 hCG_2014768A0A024R1R8 64 aa11.05□□□□□ -0.64
CPSF6-203ENST00000456847 ZFP2Q6ZN57 461 aa11.05□□□□□ -0.64
CPSF6-203ENST00000456847 Q6ZNX1 250 aa11.05□□□□□ -0.64
CPSF6-203ENST00000456847 BAGE2Q86Y30 109 aa11.05□□□□□ -0.64
CPSF6-203ENST00000456847 PKHD1P08F94 4074 aa11.04□□□□□ -0.64
CPSF6-203ENST00000456847 C1QBP02746 253 aa11.04□□□□□ -0.64
CPSF6-203ENST00000456847 JPT2Q9H910 190 aa11.04□□□□□ -0.64
CPSF6-203ENST00000456847 DNAH11Q96DT5 4516 aa11.04□□□□□ -0.64
CPSF6-203ENST00000456847 DYNC1H1Q14204 4646 aaKnown RBP11.04□□□□□ -0.64
CPSF6-203ENST00000456847 M0R381 172 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 TIRAPP58753 221 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 OR10J3Q5JRS4 329 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 FAM74A4Q5TZK3 123 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 SPATA12Q7Z6I5 190 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 NFE4Q86UQ8 179 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 TRAV8-6A0A0B4J262 113 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 RHODO00212 210 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 DNAH10OSP0CZ25 163 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 SULT1A2P50226 295 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 CCL20P78556 96 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 PRR27Q6MZM9 219 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 AKAP14Q86UN6 197 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 SLC51BQ86UW2 128 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 ATP6V0E2Q8NHE4 81 aa11.03□□□□□ -0.64
CPSF6-203ENST00000456847 GAGE12JA6NER3 117 aa11.02□□□□□ -0.65
CPSF6-203ENST00000456847 CRYGDP07320 174 aa11.02□□□□□ -0.65
CPSF6-203ENST00000456847 GAGE1Q13065 139 aa11.02□□□□□ -0.65
CPSF6-203ENST00000456847 GAGE4Q13068 117 aa11.02□□□□□ -0.65
CPSF6-203ENST00000456847 GAGE5Q13069 117 aa11.02□□□□□ -0.65
CPSF6-203ENST00000456847 GAGE13Q4V321 117 aa11.02□□□□□ -0.65
CPSF6-203ENST00000456847 ZFP82Q8N141 532 aa11.02□□□□□ -0.65
CPSF6-203ENST00000456847 SAMD10Q9BYL1 202 aa11.02□□□□□ -0.65
CPSF6-203ENST00000456847 TNFRSF18Q9Y5U5 241 aa11.02□□□□□ -0.65
CPSF6-203ENST00000456847 TRAV1-1A0A0B4J248 108 aa11.01□□□□□ -0.65
CPSF6-203ENST00000456847 K7EP13 123 aa11.01□□□□□ -0.65
CPSF6-203ENST00000456847 RPL19P84098 196 aaKnown RBP11.01□□□□□ -0.65
CPSF6-203ENST00000456847 Q6ZRN7 208 aaPredicted RBP11.01□□□□□ -0.65
CPSF6-203ENST00000456847 Q6ZSN1 163 aa11.01□□□□□ -0.65
CPSF6-203ENST00000456847 C10orf126Q8N4M7 172 aa11.01□□□□□ -0.65
CPSF6-203ENST00000456847 MSRB1Q9NZV6 116 aa11.01□□□□□ -0.65
CPSF6-203ENST00000456847 IGHV3-38A0A0C4DH36 116 aa11.01□□□□□ -0.65
CPSF6-203ENST00000456847 IFNA1P01562 189 aa11.01□□□□□ -0.65
CPSF6-203ENST00000456847 RPL35P42766 123 aaKnown RBP11.01□□□□□ -0.65
CPSF6-203ENST00000456847 A0A087WWL8 130 aa11□□□□□ -0.65
CPSF6-203ENST00000456847 EREGO14944 169 aa11□□□□□ -0.65
CPSF6-203ENST00000456847 ERVFC1-1P60608 527 aa11□□□□□ -0.65
CPSF6-203ENST00000456847 LELP1Q5T871 98 aa11□□□□□ -0.65
CPSF6-203ENST00000456847 C11orf52Q96A22 123 aa11□□□□□ -0.65
CPSF6-203ENST00000456847 GTSF1LQ9H1H1 148 aa11□□□□□ -0.65
CPSF6-203ENST00000456847 SCRT2Q9NQ03 307 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms