RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 PAXXQ9BUH6 204 aa7.89□□□□□ -1.15
LMCD1-206ENST00000456506 LENEPQ9Y5L5 61 aa7.89□□□□□ -1.15
LMCD1-206ENST00000456506 TRGV11A0A075B6L2 103 aa7.88□□□□□ -1.15
LMCD1-206ENST00000456506 GNRH2O43555 120 aa7.88□□□□□ -1.15
LMCD1-206ENST00000456506 TVP23CQ96ET8 276 aa7.88□□□□□ -1.15
LMCD1-206ENST00000456506 CTXND1A0A1B0GTU2 59 aa7.87□□□□□ -1.15
LMCD1-206ENST00000456506 M0R2P5 195 aa7.87□□□□□ -1.15
LMCD1-206ENST00000456506 PSCAO43653 123 aa7.87□□□□□ -1.15
LMCD1-206ENST00000456506 TYMSP04818 313 aa7.87□□□□□ -1.15
LMCD1-206ENST00000456506 RANP62826 216 aaKnown RBP7.87□□□□□ -1.15
LMCD1-206ENST00000456506 ZNF726P1Q15940 193 aa7.87□□□□□ -1.15
LMCD1-206ENST00000456506 FAM159AQ6UWV7 190 aa7.87□□□□□ -1.15
LMCD1-206ENST00000456506 SH2D6Q7Z4S9 175 aa7.87□□□□□ -1.15
LMCD1-206ENST00000456506 SLC25A29Q8N8R3 303 aa7.87□□□□□ -1.15
LMCD1-206ENST00000456506 OR4C5Q8NGB2 326 aa7.87□□□□□ -1.15
LMCD1-206ENST00000456506 OR10G9Q8NGN4 311 aa7.87□□□□□ -1.15
LMCD1-206ENST00000456506 OR10G7Q8NGN6 311 aa7.87□□□□□ -1.15
LMCD1-206ENST00000456506 H2AFB1P0C5Y9 115 aa7.86□□□□□ -1.15
LMCD1-206ENST00000456506 FHITP49789 147 aa7.86□□□□□ -1.15
LMCD1-206ENST00000456506 RAB2AP61019 212 aa7.86□□□□□ -1.15
LMCD1-206ENST00000456506 LINC00528Q8N1L1 170 aa7.86□□□□□ -1.15
LMCD1-206ENST00000456506 Q8N3U1 123 aa7.86□□□□□ -1.15
LMCD1-206ENST00000456506 ACTR3CQ9C0K3 210 aaPredicted RBP7.86□□□□□ -1.15
LMCD1-206ENST00000456506 Q9HAA7 133 aa7.86□□□□□ -1.15
LMCD1-206ENST00000456506 RAB19A4D1S5 217 aa7.85□□□□□ -1.15
LMCD1-206ENST00000456506 NDUFS6O75380 124 aaKnown RBP7.85□□□□□ -1.15
LMCD1-206ENST00000456506 STAG3L2P0CL84 134 aa7.85□□□□□ -1.15
LMCD1-206ENST00000456506 STAG3L3P0CL85 134 aa7.85□□□□□ -1.15
LMCD1-206ENST00000456506 LAGE3Q14657 143 aa7.85□□□□□ -1.15
LMCD1-206ENST00000456506 FAM213BQ8TBF2 198 aa7.85□□□□□ -1.15
LMCD1-206ENST00000456506 RAB24Q969Q5 203 aa7.85□□□□□ -1.15
LMCD1-206ENST00000456506 TEX46H3BTG2 121 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 OR7C2O60412 319 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 IGHV3-30P01768 117 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 IGHV3-33P01772 117 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.15
LMCD1-206ENST00000456506 LINC00694P0DN24 101 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 IGHV3-30-3P0DP02 117 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 IGHV3-30-5P0DP03 117 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 CSN1S1P47710 185 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 CDC34P49427 236 aaPredicted RBP7.84□□□□□ -1.15
LMCD1-206ENST00000456506 PPT1P50897 306 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 UBE2L3P68036 154 aaKnown RBP7.84□□□□□ -1.15
LMCD1-206ENST00000456506 LELP1Q5T871 98 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 CFAP126Q5VTH2 177 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 NHLRC2Q8NBF2 726 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 SUN5Q8TC36 379 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 DEFB104AQ8WTQ1 72 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 C11orf21Q9P2W6 132 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 NAGKQ9UJ70 344 aa7.84□□□□□ -1.15
LMCD1-206ENST00000456506 TRAV8-6A0A0B4J262 113 aa7.83□□□□□ -1.16
LMCD1-206ENST00000456506 TRBV6-4A0A1B0GX49 114 aa7.83□□□□□ -1.16
LMCD1-206ENST00000456506 A0A1W2PPV4 95 aa7.83□□□□□ -1.16
LMCD1-206ENST00000456506 RS1O15537 224 aa7.83□□□□□ -1.16
LMCD1-206ENST00000456506 EIF3GO75821 320 aaKnown RBP eCLIP7.83□□□□□ -1.16
LMCD1-206ENST00000456506 SFT2D1Q8WV19 159 aa7.83□□□□□ -1.16
LMCD1-206ENST00000456506 SMDT1Q9H4I9 107 aa7.83□□□□□ -1.16
LMCD1-206ENST00000456506 TRAV8-1A0A0A6YYK1 113 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 TRAV21A0A0B4J279 112 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 MAP1LC3B2A6NCE7 125 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 FBLL1A6NHQ2 334 aaKnown RBP7.82□□□□□ -1.16
LMCD1-206ENST00000456506 F6UZH7 168 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 PFN1P07737 140 aaKnown RBP7.82□□□□□ -1.16
LMCD1-206ENST00000456506 TAGLN2P37802 199 aaKnown RBP7.82□□□□□ -1.16
LMCD1-206ENST00000456506 ZNF80P51504 273 aaPredicted RBP7.82□□□□□ -1.16
LMCD1-206ENST00000456506 CCL20P78556 96 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 OR10J3Q5JRS4 329 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 UQCC3Q6UW78 93 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 PQLC2Q6ZP29 291 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 SCXQ7RTU7 201 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 C9orf85Q96MD7 179 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 FAM210AQ96ND0 272 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 MAP1LC3BQ9GZQ8 125 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 OTORQ9NRC9 128 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 ARL2-SNX15V9GYD0 113 aa7.82□□□□□ -1.16
LMCD1-206ENST00000456506 CXorf1O96002 111 aa7.81□□□□□ -1.16
LMCD1-206ENST00000456506 TAS2R45P59539 299 aa7.81□□□□□ -1.16
LMCD1-206ENST00000456506 RHOHQ15669 191 aa7.81□□□□□ -1.16
LMCD1-206ENST00000456506 ZNF876PQ49A33 203 aa7.81□□□□□ -1.16
LMCD1-206ENST00000456506 LINC01620Q4KN68 170 aa7.81□□□□□ -1.16
LMCD1-206ENST00000456506 ARL6IP6Q8N6S5 226 aa7.81□□□□□ -1.16
LMCD1-206ENST00000456506 PTH2Q96A98 100 aa7.81□□□□□ -1.16
LMCD1-206ENST00000456506 GTSF1LQ9H1H1 148 aa7.81□□□□□ -1.16
LMCD1-206ENST00000456506 PGPA6NDG6 321 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 LECT2O14960 151 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 CIDEAO60543 219 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 KHDC3LQ587J8 217 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 ZNF506Q5JVG8 444 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 SERTAD4-AS1Q5TG53 156 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 GOLT1AQ6ZVE7 132 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 COMMD7Q86VX2 200 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 SLC7A5P1Q8MH63 180 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 KCNS1Q96KK3 526 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 SDF2L1Q9HCN8 221 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 Q9UF83 564 aa7.8□□□□□ -1.16
LMCD1-206ENST00000456506 IGHV3-73A0A0B4J1V6 119 aa7.79□□□□□ -1.16
LMCD1-206ENST00000456506 PGPEP1LA6NFU8 196 aa7.79□□□□□ -1.16
LMCD1-206ENST00000456506 RNASE3P12724 160 aaKnown RBP7.79□□□□□ -1.16
LMCD1-206ENST00000456506 GCHFRP30047 84 aa7.79□□□□□ -1.16
LMCD1-206ENST00000456506 GNG5P63218 68 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms