RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 UBE2G1P62253 170 aa12.19□□□□□ -0.46
MSH6-207ENST00000456246 EIF5AP63241 154 aaKnown RBP12.19□□□□□ -0.46
MSH6-207ENST00000456246 ZNF506Q5JVG8 444 aa12.19□□□□□ -0.46
MSH6-207ENST00000456246 COX8CQ7Z4L0 72 aa12.19□□□□□ -0.46
MSH6-207ENST00000456246 NHLRC2Q8NBF2 726 aa12.19□□□□□ -0.46
MSH6-207ENST00000456246 KANTRA0A1W2PQU2 76 aa12.18□□□□□ -0.46
MSH6-207ENST00000456246 DNAH10OSP0CZ25 163 aa12.18□□□□□ -0.46
MSH6-207ENST00000456246 MGST1P10620 155 aaKnown RBP12.18□□□□□ -0.46
MSH6-207ENST00000456246 ASIPP42127 132 aa12.18□□□□□ -0.46
MSH6-207ENST00000456246 Q6ZRN7 208 aaPredicted RBP12.18□□□□□ -0.46
MSH6-207ENST00000456246 C10orf126Q8N4M7 172 aa12.18□□□□□ -0.46
MSH6-207ENST00000456246 IGKV3D-20A0A0C4DH25 116 aa12.17□□□□□ -0.46
MSH6-207ENST00000456246 TRBV6-1A0A0K0K1D8 114 aa12.17□□□□□ -0.46
MSH6-207ENST00000456246 A8MWV9 139 aa12.17□□□□□ -0.46
MSH6-207ENST00000456246 CST9LP1Q5W188 147 aa12.17□□□□□ -0.46
MSH6-207ENST00000456246 DPPA3Q6W0C5 159 aa12.17□□□□□ -0.46
MSH6-207ENST00000456246 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
MSH6-207ENST00000456246 SLC25A29Q8N8R3 303 aa12.17□□□□□ -0.46
MSH6-207ENST00000456246 IL36BQ9NZH7 164 aa12.17□□□□□ -0.46
MSH6-207ENST00000456246 PGPEP1LA6NFU8 196 aa12.16□□□□□ -0.46
MSH6-207ENST00000456246 EREGO14944 169 aa12.16□□□□□ -0.46
MSH6-207ENST00000456246 BCL2L11O43521 198 aa12.16□□□□□ -0.46
MSH6-207ENST00000456246 CDK2AP2O75956 126 aa12.16□□□□□ -0.46
MSH6-207ENST00000456246 FAM162BQ5T6X4 162 aa12.16□□□□□ -0.46
MSH6-207ENST00000456246 ZFP2Q6ZN57 461 aa12.16□□□□□ -0.46
MSH6-207ENST00000456246 WFDC10BQ8IUB3 73 aa12.16□□□□□ -0.46
MSH6-207ENST00000456246 ZNF471Q9BX82 626 aaPredicted RBP12.16□□□□□ -0.46
MSH6-207ENST00000456246 LOC100131303A0A0U1RQF7 123 aa12.15□□□□□ -0.46
MSH6-207ENST00000456246 B4DEV8 164 aa12.15□□□□□ -0.46
MSH6-207ENST00000456246 ERVFC1-1P60608 527 aa12.15□□□□□ -0.46
MSH6-207ENST00000456246 DNLZQ5SXM8 178 aa12.15□□□□□ -0.46
MSH6-207ENST00000456246 FAM213BQ8TBF2 198 aa12.15□□□□□ -0.46
MSH6-207ENST00000456246 MBD3L1Q8WWY6 194 aa12.15□□□□□ -0.46
MSH6-207ENST00000456246 ZC2HC1AQ96GY0 325 aa12.15□□□□□ -0.46
MSH6-207ENST00000456246 LTAP01374 205 aa12.14□□□□□ -0.47
MSH6-207ENST00000456246 S100A9P06702 114 aaKnown RBP12.14□□□□□ -0.47
MSH6-207ENST00000456246 AKR1C3P42330 323 aa12.14□□□□□ -0.47
MSH6-207ENST00000456246 SYT8Q8NBV8 401 aa12.14□□□□□ -0.47
MSH6-207ENST00000456246 OR11H4Q8NGC9 324 aa12.14□□□□□ -0.47
MSH6-207ENST00000456246 SFT2D1Q8WV19 159 aa12.14□□□□□ -0.47
MSH6-207ENST00000456246 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
MSH6-207ENST00000456246 TRAV8-6A0A0B4J262 113 aa12.13□□□□□ -0.47
MSH6-207ENST00000456246 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
MSH6-207ENST00000456246 SH2D1AO60880 128 aa12.13□□□□□ -0.47
MSH6-207ENST00000456246 PFDN1O60925 122 aa12.13□□□□□ -0.47
MSH6-207ENST00000456246 LGALSLQ3ZCW2 172 aaPredicted RBP12.13□□□□□ -0.47
MSH6-207ENST00000456246 PARLQ9H300 379 aa12.13□□□□□ -0.47
MSH6-207ENST00000456246 IGHV3-73A0A0B4J1V6 119 aa12.12□□□□□ -0.47
MSH6-207ENST00000456246 KRBOX1C9JBD0 128 aa12.12□□□□□ -0.47
MSH6-207ENST00000456246 RHODO00212 210 aa12.12□□□□□ -0.47
MSH6-207ENST00000456246 PAGE4O60829 102 aa12.12□□□□□ -0.47
MSH6-207ENST00000456246 CRYGDP07320 174 aa12.12□□□□□ -0.47
MSH6-207ENST00000456246 TPT1P13693 172 aaKnown RBP12.12□□□□□ -0.47
MSH6-207ENST00000456246 CRIP1P50238 77 aa12.12□□□□□ -0.47
MSH6-207ENST00000456246 ZNF674Q2M3X9 581 aa12.12□□□□□ -0.47
MSH6-207ENST00000456246 LINC01556Q5JQF7 62 aa12.12□□□□□ -0.47
MSH6-207ENST00000456246 H3BVH4 76 aa12.11□□□□□ -0.47
MSH6-207ENST00000456246 M0R036 132 aa12.11□□□□□ -0.47
MSH6-207ENST00000456246 LINC01559Q495D7 138 aa12.11□□□□□ -0.47
MSH6-207ENST00000456246 LELP1Q5T871 98 aa12.11□□□□□ -0.47
MSH6-207ENST00000456246 ATP6V0E2Q8NHE4 81 aa12.11□□□□□ -0.47
MSH6-207ENST00000456246 PGPEP1Q9NXJ5 209 aa12.11□□□□□ -0.47
MSH6-207ENST00000456246 H2AFB1P0C5Y9 115 aa12.1□□□□□ -0.47
MSH6-207ENST00000456246 ARMS2P0C7Q2 107 aa12.1□□□□□ -0.47
MSH6-207ENST00000456246 KRTAP10-2P60368 255 aa12.1□□□□□ -0.47
MSH6-207ENST00000456246 CDPF1Q6NVV7 123 aa12.1□□□□□ -0.47
MSH6-207ENST00000456246 GTSF1LQ9H1H1 148 aa12.1□□□□□ -0.47
MSH6-207ENST00000456246 OR10J3Q5JRS4 329 aa12.09□□□□□ -0.47
MSH6-207ENST00000456246 EIF5AL1Q6IS14 154 aaKnown RBP12.09□□□□□ -0.47
MSH6-207ENST00000456246 TMUB2Q71RG4 321 aa12.09□□□□□ -0.47
MSH6-207ENST00000456246 PHLDA3Q9Y5J5 127 aa12.09□□□□□ -0.47
MSH6-207ENST00000456246 RAB5CP51148 216 aa12.08□□□□□ -0.48
MSH6-207ENST00000456246 DMRTA1Q5VZB9 504 aa12.08□□□□□ -0.48
MSH6-207ENST00000456246 KRTAP17-1Q9BYP8 105 aa12.08□□□□□ -0.48
MSH6-207ENST00000456246 SCRT2Q9NQ03 307 aa12.08□□□□□ -0.48
MSH6-207ENST00000456246 TNFRSF18Q9Y5U5 241 aa12.08□□□□□ -0.48
MSH6-207ENST00000456246 GRIFINA4D1Z8 144 aa12.07□□□□□ -0.48
MSH6-207ENST00000456246 CXCL1P09341 107 aa12.07□□□□□ -0.48
MSH6-207ENST00000456246 UFSP1Q6NVU6 142 aa12.07□□□□□ -0.48
MSH6-207ENST00000456246 ZFP82Q8N141 532 aa12.07□□□□□ -0.48
MSH6-207ENST00000456246 MANBALQ9NQG1 85 aa12.07□□□□□ -0.48
MSH6-207ENST00000456246 RYR1P21817 5038 aa12.07□□□□□ -0.48
MSH6-207ENST00000456246 LRP1BQ9NZR2 4599 aa12.07□□□□□ -0.48
MSH6-207ENST00000456246 A0A087WTM6 91 aa12.06□□□□□ -0.48
MSH6-207ENST00000456246 A0A1B0GV50 99 aa12.06□□□□□ -0.48
MSH6-207ENST00000456246 SCO2A0A1W2PP80 73 aa12.06□□□□□ -0.48
MSH6-207ENST00000456246 TEX46H3BTG2 121 aa12.06□□□□□ -0.48
MSH6-207ENST00000456246 BAGE2Q86Y30 109 aa12.06□□□□□ -0.48
MSH6-207ENST00000456246 A0A087WWC5 75 aa12.05□□□□□ -0.48
MSH6-207ENST00000456246 TRAV1-1A0A0B4J248 108 aa12.05□□□□□ -0.48
MSH6-207ENST00000456246 IBA57-AS1B1ANH7 110 aa12.05□□□□□ -0.48
MSH6-207ENST00000456246 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
MSH6-207ENST00000456246 Q6ZSN1 163 aa12.05□□□□□ -0.48
MSH6-207ENST00000456246 SFRP2Q96HF1 295 aa12.05□□□□□ -0.48
MSH6-207ENST00000456246 PCLOQ9Y6V0 5065 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 TMSB15BA0A087X1C1 80 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 GAGE12JA6NER3 117 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 GAGE1Q13065 139 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 GAGE4Q13068 117 aa12.04□□□□□ -0.48
MSH6-207ENST00000456246 GAGE5Q13069 117 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms