RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 CCL19Q99731 98 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 FOXC2Q99958 501 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 BPESC1Q9GZL8 116 aa5.9□□□□□ -1.47
HDAC9-218ENST00000456174 AKAP6Q13023 2319 aa5.89□□□□□ -1.47
HDAC9-218ENST00000456174 FLNCQ14315 2725 aa5.89□□□□□ -1.47
HDAC9-218ENST00000456174 PRSS1P07477 247 aa5.89□□□□□ -1.47
HDAC9-218ENST00000456174 HOXB4P17483 251 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-218ENST00000456174 MRPL51Q4U2R6 128 aaKnown RBP5.89□□□□□ -1.47
HDAC9-218ENST00000456174 WFDC3Q8IUB2 231 aa5.89□□□□□ -1.47
HDAC9-218ENST00000456174 NDUFA4L2Q9NRX3 87 aa5.89□□□□□ -1.47
HDAC9-218ENST00000456174 ZFYVE26Q68DK2 2539 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 PGPA6NDG6 321 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 LGALS9O00182 355 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 TCRAP04437 139 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 ATP5G1P05496 136 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 LGALS1P09382 135 aaKnown RBP5.88□□□□□ -1.47
HDAC9-218ENST00000456174 LMO4P61968 165 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 C10orf113Q5VZT2 155 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 HCP5Q6MZN7 132 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 VMO1Q7Z5L0 202 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 TRPT1Q86TN4 253 aaKnown RBP5.88□□□□□ -1.47
HDAC9-218ENST00000456174 NDUFA11Q86Y39 141 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 AAMDCQ9H7C9 122 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 DPM3Q9P2X0 92 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 TACC2O95359 2948 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 SPTAN1Q13813 2472 aaKnown RBP5.88□□□□□ -1.47
HDAC9-218ENST00000456174 E7EUB6 86 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 COX7A2P2O60397 106 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 CNTFRP26992 372 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 TNP2Q05952 138 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 C2orf83Q53S99 150 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 PATE2Q6UY27 113 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 NTN5Q8WTR8 489 aaPredicted RBP5.88□□□□□ -1.47
HDAC9-218ENST00000456174 SRSF12Q8WXF0 261 aaKnown RBP5.88□□□□□ -1.47
HDAC9-218ENST00000456174 TPSG1Q9NRR2 321 aa5.88□□□□□ -1.47
HDAC9-218ENST00000456174 USP9XQ93008 2570 aaPredicted RBP5.88□□□□□ -1.47
HDAC9-218ENST00000456174 TRAV40A0A0B4J280 105 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 RBAKDNA6NC62 111 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 ODF3BA8MYP8 253 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 PLXNB1O43157 2135 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 PLNP26678 52 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 LEPP41159 167 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 C1orf43Q9BWL3 253 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 MRPL35Q9NZE8 188 aaKnown RBP5.87□□□□□ -1.47
HDAC9-218ENST00000456174 WNK2Q9Y3S1 2297 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 CGB1A6NKQ9 187 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 RNASE2P10153 161 aaKnown RBP5.87□□□□□ -1.47
HDAC9-218ENST00000456174 CRYGAP11844 174 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 ERHP84090 104 aaKnown RBP5.87□□□□□ -1.47
HDAC9-218ENST00000456174 CD69Q07108 199 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 MRGPRG-AS1Q2M3A8 158 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 C10orf55Q5SWW7 151 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 AMN1Q8IY45 258 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 SIRPDQ9H106 197 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 NXT2Q9NPJ8 142 aaKnown RBP5.87□□□□□ -1.47
HDAC9-218ENST00000456174 ZNF462Q96JM2 2506 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 MYO18BQ8IUG5 2567 aa5.87□□□□□ -1.47
HDAC9-218ENST00000456174 INS-IGF2F8WCM5 200 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 IGLV2-11P01706 119 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 WT1-ASQ06250 92 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 DEFB121Q5J5C9 76 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 RNF5Q99942 180 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 KLK5Q9Y337 293 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-218ENST00000456174 COL12A1Q99715 3063 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 FAM236AA0A1B0GUQ0 79 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 FAM236BA0A1B0GV22 79 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 P0DMU3 169 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 FAM231AP0DMU4 169 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 FAM231CP0DMU5 169 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 Q5XG85 94 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 SFTA2Q6UW10 78 aa5.86□□□□□ -1.47
HDAC9-218ENST00000456174 SLC25A39Q9BZJ4 359 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-218ENST00000456174 H3BMM0 161 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 COX6B1P14854 86 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 HLA-DMBP28068 263 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 CKS2P33552 79 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 RPL27AP46776 148 aaKnown RBP5.85□□□□□ -1.47
HDAC9-218ENST00000456174 GAGE2AQ6NT46 116 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 C10orf105Q8TEF2 133 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 UBE2WQ96B02 151 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 NAV3Q8IVL0 2385 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 EPG5Q9HCE0 2579 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 TRAV12-1A0A0B4J245 112 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 MRPS12O15235 138 aaKnown RBP5.85□□□□□ -1.47
HDAC9-218ENST00000456174 COX7CP15954 63 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 CRIP2P52943 208 aaPredicted RBP5.85□□□□□ -1.47
HDAC9-218ENST00000456174 SUB1P53999 127 aaKnown RBP eCLIP5.85□□□□□ -1.47
HDAC9-218ENST00000456174 PLGLAQ15195 96 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 MINOS1Q5TGZ0 78 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 DYNAPQ8N1N2 210 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 Q9H3A6 140 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 OTORQ9NRC9 128 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 MINOS1-NBL1R4GNA1 71 aa5.85□□□□□ -1.47
HDAC9-218ENST00000456174 UTP20O75691 2785 aaKnown RBP5.85□□□□□ -1.47
HDAC9-218ENST00000456174 MED13LQ71F56 2210 aa5.84□□□□□ -1.47
HDAC9-218ENST00000456174 UBR5O95071 2799 aaPredicted RBP5.84□□□□□ -1.47
HDAC9-218ENST00000456174 IGHV4-61A0A0C4DH41 118 aa5.84□□□□□ -1.47
HDAC9-218ENST00000456174 J3QLI3 93 aa5.84□□□□□ -1.47
HDAC9-218ENST00000456174 OVOL1O14753 267 aa5.84□□□□□ -1.47
HDAC9-218ENST00000456174 UBE2E1P51965 193 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms