RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 C10orf105Q8TEF2 133 aa9.66□□□□□ -0.86
NEDD4L-208ENST00000456173 MED13Q9UHV7 2174 aa9.66□□□□□ -0.86
NEDD4L-208ENST00000456173 IGHV1-69DA0A0B4J2H0 117 aa9.66□□□□□ -0.86
NEDD4L-208ENST00000456173 SDIM1Q6ZPB5 146 aa9.66□□□□□ -0.86
NEDD4L-208ENST00000456173 MPLKIPQ8TAP9 179 aa9.66□□□□□ -0.86
NEDD4L-208ENST00000456173 PIFOQ8TCI5 191 aa9.66□□□□□ -0.86
NEDD4L-208ENST00000456173 ACACAQ13085 2346 aa9.66□□□□□ -0.86
NEDD4L-208ENST00000456173 ZNF672Q499Z4 452 aaPredicted RBP9.65□□□□□ -0.86
NEDD4L-208ENST00000456173 DTX1Q86Y01 620 aa9.65□□□□□ -0.86
NEDD4L-208ENST00000456173 TRAV23DV6A0A075B6W5 121 aa9.65□□□□□ -0.86
NEDD4L-208ENST00000456173 UBE2E1P51965 193 aa9.65□□□□□ -0.86
NEDD4L-208ENST00000456173 ATP5J2P56134 94 aa9.65□□□□□ -0.86
NEDD4L-208ENST00000456173 UFSP1Q6NVU6 142 aa9.65□□□□□ -0.86
NEDD4L-208ENST00000456173 PLXNB1O43157 2135 aa9.65□□□□□ -0.86
NEDD4L-208ENST00000456173 G3V318 75 aa9.65□□□□□ -0.87
NEDD4L-208ENST00000456173 RNF152Q8N8N0 203 aa9.65□□□□□ -0.87
NEDD4L-208ENST00000456173 ZFHX2Q9C0A1 2572 aaPredicted RBP9.65□□□□□ -0.87
NEDD4L-208ENST00000456173 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.64□□□□□ -0.87
NEDD4L-208ENST00000456173 IGHV1OR15-1A0A075B7D0 117 aa9.64□□□□□ -0.87
NEDD4L-208ENST00000456173 IGKV2-29A2NJV5 120 aaPredicted RBP9.64□□□□□ -0.87
NEDD4L-208ENST00000456173 SHISA2Q6UWI4 295 aa9.64□□□□□ -0.87
NEDD4L-208ENST00000456173 ZNRF2Q8NHG8 242 aa9.64□□□□□ -0.87
NEDD4L-208ENST00000456173 MBD6Q96DN6 1003 aa9.64□□□□□ -0.87
NEDD4L-208ENST00000456173 WFDC11Q8NEX6 87 aa9.64□□□□□ -0.87
NEDD4L-208ENST00000456173 Q8TCH9 128 aa9.64□□□□□ -0.87
NEDD4L-208ENST00000456173 PCNX1Q96RV3 2341 aa9.64□□□□□ -0.87
NEDD4L-208ENST00000456173 ATP6V0E1O15342 81 aa9.64□□□□□ -0.87
NEDD4L-208ENST00000456173 TOMM6Q96B49 74 aa9.64□□□□□ -0.87
NEDD4L-208ENST00000456173 CFAP126Q5VTH2 177 aa9.63□□□□□ -0.87
NEDD4L-208ENST00000456173 Q9HAA7 133 aa9.63□□□□□ -0.87
NEDD4L-208ENST00000456173 LY6HO94772 140 aa9.63□□□□□ -0.87
NEDD4L-208ENST00000456173 MRPL36Q9P0J6 103 aaKnown RBP9.63□□□□□ -0.87
NEDD4L-208ENST00000456173 MALRD1Q5VYJ5 2156 aa9.63□□□□□ -0.87
NEDD4L-208ENST00000456173 PRSS22Q9GZN4 317 aa9.63□□□□□ -0.87
NEDD4L-208ENST00000456173 DAZ1Q9NQZ3 744 aaKnown RBP9.63□□□□□ -0.87
NEDD4L-208ENST00000456173 MRPS12O15235 138 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-208ENST00000456173 DNAH12Q6ZR08 3092 aa9.62□□□□□ -0.87
NEDD4L-208ENST00000456173 HRCT1Q6UXD1 115 aa9.62□□□□□ -0.87
NEDD4L-208ENST00000456173 Q6ZPA2 131 aa9.62□□□□□ -0.87
NEDD4L-208ENST00000456173 C14orf132Q9NPU4 83 aa9.62□□□□□ -0.87
NEDD4L-208ENST00000456173 SS18Q15532 418 aa9.62□□□□□ -0.87
NEDD4L-208ENST00000456173 ABCA4P78363 2273 aa9.62□□□□□ -0.87
NEDD4L-208ENST00000456173 IGKV1-17P01599 117 aa9.62□□□□□ -0.87
NEDD4L-208ENST00000456173 SMIM9A6NGZ8 99 aa9.61□□□□□ -0.87
NEDD4L-208ENST00000456173 OOSP1A8MZH6 123 aa9.61□□□□□ -0.87
NEDD4L-208ENST00000456173 Q71RC1 249 aaPredicted RBP9.61□□□□□ -0.87
NEDD4L-208ENST00000456173 U3KQE9 123 aa9.61□□□□□ -0.87
NEDD4L-208ENST00000456173 THSD7BQ9C0I4 1608 aa9.61□□□□□ -0.87
NEDD4L-208ENST00000456173 FAM236DA0A1B0GTK5 79 aa9.61□□□□□ -0.87
NEDD4L-208ENST00000456173 FAM236CP0DP71 79 aa9.61□□□□□ -0.87
NEDD4L-208ENST00000456173 TMEM105Q8N8V8 129 aa9.61□□□□□ -0.87
NEDD4L-208ENST00000456173 LECT2O14960 151 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 COL8A2P25067 703 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 MINOS1Q5TGZ0 78 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 BRD3OSQ6XYD6 125 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 C8orf31Q8N9H6 132 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 MINOS1-NBL1R4GNA1 71 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 MGAMO43451 1857 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 TANC1Q9C0D5 1861 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 DEFB131AP59861 70 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 C11orf53Q8IXP5 236 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 C11orf44Q8N8P7 122 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 FAM110DQ8TAY7 271 aaPredicted RBP9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 VWA8A3KMH1 1905 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 Q6ZSR3 168 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 SLC25A29Q8N8R3 303 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 OPRPNQ99935 248 aaPredicted RBP9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 CFHR3Q02985 330 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 TMEM61Q8N0U2 210 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 SND1-IT1Q9HBX3 110 aa9.6□□□□□ -0.87
NEDD4L-208ENST00000456173 NACAE9PAV3 2078 aa9.59□□□□□ -0.87
NEDD4L-208ENST00000456173 PRAC2D3DTV9 90 aa9.59□□□□□ -0.87
NEDD4L-208ENST00000456173 THBDP07204 575 aa9.59□□□□□ -0.87
NEDD4L-208ENST00000456173 FAM110AQ9BQ89 295 aa9.59□□□□□ -0.87
NEDD4L-208ENST00000456173 KIAA1549Q9HCM3 1950 aa9.59□□□□□ -0.87
NEDD4L-208ENST00000456173 LOXP28300 417 aaPredicted RBP9.59□□□□□ -0.87
NEDD4L-208ENST00000456173 FAM223BA6NKX1 122 aa9.58□□□□□ -0.88
NEDD4L-208ENST00000456173 MRPL55Q7Z7F7 128 aaKnown RBP9.58□□□□□ -0.88
NEDD4L-208ENST00000456173 FAM223AQ8IWN6 122 aa9.58□□□□□ -0.88
NEDD4L-208ENST00000456173 PLXNA3P51805 1871 aa9.58□□□□□ -0.88
NEDD4L-208ENST00000456173 E7EUB6 86 aa9.58□□□□□ -0.88
NEDD4L-208ENST00000456173 WFDC9Q8NEX5 89 aa9.58□□□□□ -0.88
NEDD4L-208ENST00000456173 F8WEM9 126 aa9.58□□□□□ -0.88
NEDD4L-208ENST00000456173 MED12LQ86YW9 2145 aa9.58□□□□□ -0.88
NEDD4L-208ENST00000456173 H0YGX0 51 aa9.58□□□□□ -0.88
NEDD4L-208ENST00000456173 RITA1Q96K30 269 aa9.58□□□□□ -0.88
NEDD4L-208ENST00000456173 XCL2Q9UBD3 114 aa9.58□□□□□ -0.88
NEDD4L-208ENST00000456173 DAZ2Q13117 558 aaKnown RBP9.57□□□□□ -0.88
NEDD4L-208ENST00000456173 DAZ4Q86SG3 579 aaKnown RBP9.57□□□□□ -0.88
NEDD4L-208ENST00000456173 LINC00311Q8N616 119 aa9.57□□□□□ -0.88
NEDD4L-208ENST00000456173 DAZ3Q9NR90 486 aaKnown RBP9.57□□□□□ -0.88
NEDD4L-208ENST00000456173 H3BUX3 64 aa9.57□□□□□ -0.88
NEDD4L-208ENST00000456173 CD59P13987 128 aa9.57□□□□□ -0.88
NEDD4L-208ENST00000456173 SPTSSBQ8NFR3 76 aa9.57□□□□□ -0.88
NEDD4L-208ENST00000456173 USMG5Q96IX5 58 aa9.57□□□□□ -0.88
NEDD4L-208ENST00000456173 PLXNA4Q9HCM2 1894 aa9.57□□□□□ -0.88
NEDD4L-208ENST00000456173 COL4A6Q14031 1691 aa9.57□□□□□ -0.88
NEDD4L-208ENST00000456173 IGFBPL1Q8WX77 278 aa9.57□□□□□ -0.88
NEDD4L-208ENST00000456173 MLST8Q9BVC4 326 aa9.56□□□□□ -0.88
NEDD4L-208ENST00000456173 P0C879 139 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms