RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 H2BFSP57053 126 aa12.24□□□□□ -0.45
MSH6-206ENST00000455383 ZFP2Q6ZN57 461 aa12.24□□□□□ -0.45
MSH6-206ENST00000455383 PPP1R1CQ8WVI7 109 aa12.24□□□□□ -0.45
MSH6-206ENST00000455383 NDFIP1Q9BT67 221 aa12.24□□□□□ -0.45
MSH6-206ENST00000455383 PARLQ9H300 379 aa12.24□□□□□ -0.45
MSH6-206ENST00000455383 GGTLC3B5MD39 225 aa12.23□□□□□ -0.45
MSH6-206ENST00000455383 TMEM75Q8N9X5 138 aa12.23□□□□□ -0.45
MSH6-206ENST00000455383 GAGE12JA6NER3 117 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 GCGP01275 180 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 IGLV2-11P01706 119 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 TCRAP04437 139 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 GAGE1Q13065 139 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 GAGE4Q13068 117 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 GAGE5Q13069 117 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 ACOT6Q3I5F7 207 aaPredicted RBP12.22□□□□□ -0.45
MSH6-206ENST00000455383 GAGE13Q4V321 117 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 PIK3CD-AS1Q5SR53 167 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 Q8N976 141 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 CIRBP-AS1Q8TBR5 109 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 LINC00479Q96M42 142 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 SMIM3Q9BZL3 60 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 Q9UF83 564 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 PSG8Q9UQ74 426 aa12.22□□□□□ -0.45
MSH6-206ENST00000455383 A0A087WWC5 75 aa12.21□□□□□ -0.45
MSH6-206ENST00000455383 A0A1W2PPV4 95 aa12.21□□□□□ -0.45
MSH6-206ENST00000455383 RBFOX3A6NFN3 312 aa12.21□□□□□ -0.45
MSH6-206ENST00000455383 RAB2AP61019 212 aa12.21□□□□□ -0.45
MSH6-206ENST00000455383 UFSP1Q6NVU6 142 aa12.21□□□□□ -0.45
MSH6-206ENST00000455383 CYB561D1Q8N8Q1 229 aa12.21□□□□□ -0.45
MSH6-206ENST00000455383 SUN5Q8TC36 379 aa12.21□□□□□ -0.45
MSH6-206ENST00000455383 WFDC1Q9HC57 220 aa12.21□□□□□ -0.45
MSH6-206ENST00000455383 A8MWV9 139 aa12.2□□□□□ -0.46
MSH6-206ENST00000455383 MPC2O95563 127 aa12.2□□□□□ -0.46
MSH6-206ENST00000455383 RPL12P30050 165 aaKnown RBP12.2□□□□□ -0.46
MSH6-206ENST00000455383 C5orf17Q8NAS9 161 aa12.2□□□□□ -0.46
MSH6-206ENST00000455383 RMI2Q96E14 147 aa12.2□□□□□ -0.46
MSH6-206ENST00000455383 DNAJC30Q96LL9 226 aa12.2□□□□□ -0.46
MSH6-206ENST00000455383 HMGB3O15347 200 aaKnown RBP12.19□□□□□ -0.46
MSH6-206ENST00000455383 SMUG1Q53HV7 270 aa12.19□□□□□ -0.46
MSH6-206ENST00000455383 SAMD10Q9BYL1 202 aa12.19□□□□□ -0.46
MSH6-206ENST00000455383 IGKV3D-20A0A0C4DH25 116 aa12.18□□□□□ -0.46
MSH6-206ENST00000455383 IGLV2-8P01709 118 aa12.18□□□□□ -0.46
MSH6-206ENST00000455383 STAG3L2P0CL84 134 aa12.18□□□□□ -0.46
MSH6-206ENST00000455383 STAG3L3P0CL85 134 aa12.18□□□□□ -0.46
MSH6-206ENST00000455383 ARL14EPLP0DKL9 152 aa12.18□□□□□ -0.46
MSH6-206ENST00000455383 FGF8P55075 233 aaPredicted RBP12.18□□□□□ -0.46
MSH6-206ENST00000455383 NIT1Q86X76 327 aa12.18□□□□□ -0.46
MSH6-206ENST00000455383 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
MSH6-206ENST00000455383 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
MSH6-206ENST00000455383 PLA2G2DQ9UNK4 145 aa12.18□□□□□ -0.46
MSH6-206ENST00000455383 K7EQM0 130 aa12.17□□□□□ -0.46
MSH6-206ENST00000455383 PET100P0DJ07 73 aa12.17□□□□□ -0.46
MSH6-206ENST00000455383 FLI1Q01543 452 aaPredicted RBP12.17□□□□□ -0.46
MSH6-206ENST00000455383 ATRAIDQ6UW56 229 aa12.17□□□□□ -0.46
MSH6-206ENST00000455383 LINC00299Q6ZSB3 139 aa12.17□□□□□ -0.46
MSH6-206ENST00000455383 C14orf178Q8N769 122 aaPredicted RBP12.17□□□□□ -0.46
MSH6-206ENST00000455383 OR2T35Q8NGX2 323 aa12.17□□□□□ -0.46
MSH6-206ENST00000455383 ENKURQ8TC29 256 aa12.17□□□□□ -0.46
MSH6-206ENST00000455383 IGKV2D-24A0A075B6R9 120 aa12.16□□□□□ -0.46
MSH6-206ENST00000455383 SEC11BP0C7V7 166 aa12.16□□□□□ -0.46
MSH6-206ENST00000455383 ZFP69Q49AA0 526 aa12.16□□□□□ -0.46
MSH6-206ENST00000455383 JPT2Q9H910 190 aa12.16□□□□□ -0.46
MSH6-206ENST00000455383 CDC34P49427 236 aaPredicted RBP12.15□□□□□ -0.46
MSH6-206ENST00000455383 LGALSLQ3ZCW2 172 aaPredicted RBP12.15□□□□□ -0.46
MSH6-206ENST00000455383 SAPCD1Q5SSQ6 148 aa12.15□□□□□ -0.46
MSH6-206ENST00000455383 PRNTQ86SH4 94 aa12.15□□□□□ -0.46
MSH6-206ENST00000455383 NDUFA13Q9P0J0 144 aa12.15□□□□□ -0.46
MSH6-206ENST00000455383 KLK12Q9UKR0 248 aa12.15□□□□□ -0.46
MSH6-206ENST00000455383 EPDR1Q9UM22 224 aa12.15□□□□□ -0.46
MSH6-206ENST00000455383 INMT-MINDY4F8WBC2 141 aa12.14□□□□□ -0.47
MSH6-206ENST00000455383 GCHFRP30047 84 aa12.14□□□□□ -0.47
MSH6-206ENST00000455383 OR2G3Q8NGZ4 309 aa12.14□□□□□ -0.47
MSH6-206ENST00000455383 CHCHD7Q9BUK0 85 aa12.14□□□□□ -0.47
MSH6-206ENST00000455383 IL36BQ9NZH7 164 aa12.14□□□□□ -0.47
MSH6-206ENST00000455383 URGCP-MRPS24S4R325 110 aa12.14□□□□□ -0.47
MSH6-206ENST00000455383 S100A4P26447 101 aaKnown RBP12.13□□□□□ -0.47
MSH6-206ENST00000455383 SUMO1P63165 101 aaKnown RBP12.13□□□□□ -0.47
MSH6-206ENST00000455383 RAB24Q969Q5 203 aa12.13□□□□□ -0.47
MSH6-206ENST00000455383 UBE2WQ96B02 151 aa12.13□□□□□ -0.47
MSH6-206ENST00000455383 RHODO00212 210 aa12.12□□□□□ -0.47
MSH6-206ENST00000455383 ASIPP42127 132 aa12.12□□□□□ -0.47
MSH6-206ENST00000455383 DNLZQ5SXM8 178 aa12.12□□□□□ -0.47
MSH6-206ENST00000455383 DMRTA1Q5VZB9 504 aa12.12□□□□□ -0.47
MSH6-206ENST00000455383 S100ZQ8WXG8 99 aa12.12□□□□□ -0.47
MSH6-206ENST00000455383 MARVELD1Q9BSK0 173 aa12.12□□□□□ -0.47
MSH6-206ENST00000455383 FABP5P3A8MUU1 101 aa12.11□□□□□ -0.47
MSH6-206ENST00000455383 UPK1BO75841 260 aa12.11□□□□□ -0.47
MSH6-206ENST00000455383 IFITM3Q01628 133 aa12.11□□□□□ -0.47
MSH6-206ENST00000455383 ELOBQ15370 118 aa12.11□□□□□ -0.47
MSH6-206ENST00000455383 TMEM167BQ9NRX6 74 aa12.11□□□□□ -0.47
MSH6-206ENST00000455383 HNRNPA3P51991 378 aaKnown RBP12.1□□□□□ -0.47
MSH6-206ENST00000455383 DAZAP1Q96EP5 407 aaKnown RBP12.1□□□□□ -0.47
MSH6-206ENST00000455383 RPL37AP61513 92 aaKnown RBP12.09□□□□□ -0.47
MSH6-206ENST00000455383 Q0VG73 95 aa12.09□□□□□ -0.47
MSH6-206ENST00000455383 C14orf177Q52M58 125 aa12.09□□□□□ -0.47
MSH6-206ENST00000455383 PSMG3Q9BT73 122 aaPredicted RBP12.09□□□□□ -0.47
MSH6-206ENST00000455383 ARL2-SNX15V9GYD0 113 aa12.09□□□□□ -0.47
MSH6-206ENST00000455383 A0A087WX48 190 aa12.08□□□□□ -0.48
MSH6-206ENST00000455383 TRAV34A0A0B4J273 112 aa12.08□□□□□ -0.48
MSH6-206ENST00000455383 H3BVH4 76 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms