RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 PAX4O43316 350 aa7.81□□□□□ -1.16
HDAC9-217ENST00000455069 FAM3BP58499 235 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-217ENST00000455069 ESRGQ1W209 222 aa7.81□□□□□ -1.16
HDAC9-217ENST00000455069 ZNF506Q5JVG8 444 aa7.81□□□□□ -1.16
HDAC9-217ENST00000455069 FAM162BQ5T6X4 162 aa7.81□□□□□ -1.16
HDAC9-217ENST00000455069 ALKAL2Q6UX46 152 aa7.81□□□□□ -1.16
HDAC9-217ENST00000455069 KIAA1109Q2LD37 5005 aa7.81□□□□□ -1.16
HDAC9-217ENST00000455069 DNAH2Q9P225 4427 aa7.8□□□□□ -1.16
HDAC9-217ENST00000455069 TRGV4A0A0C4DH28 118 aa7.8□□□□□ -1.16
HDAC9-217ENST00000455069 B4DEV8 164 aa7.8□□□□□ -1.16
HDAC9-217ENST00000455069 C9JCJ5 164 aa7.8□□□□□ -1.16
HDAC9-217ENST00000455069 ORM1P02763 201 aa7.8□□□□□ -1.16
HDAC9-217ENST00000455069 CCL18P55774 89 aa7.8□□□□□ -1.16
HDAC9-217ENST00000455069 ZNF876PQ49A33 203 aa7.8□□□□□ -1.16
HDAC9-217ENST00000455069 DNLZQ5SXM8 178 aa7.8□□□□□ -1.16
HDAC9-217ENST00000455069 OR4C5Q8NGB2 326 aa7.8□□□□□ -1.16
HDAC9-217ENST00000455069 PTH2Q96A98 100 aa7.8□□□□□ -1.16
HDAC9-217ENST00000455069 HHLA3Q9XRX5 114 aa7.8□□□□□ -1.16
HDAC9-217ENST00000455069 LOC100131303A0A0U1RQF7 123 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 GRIFINA4D1Z8 144 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 H3BVH4 76 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 RTL8CO15255 209 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 RS1O15537 224 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 S100A9P06702 114 aaKnown RBP7.79□□□□□ -1.16
HDAC9-217ENST00000455069 BCL2P10415 239 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 ASIPP42127 132 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 RPL35P42766 123 aaKnown RBP7.79□□□□□ -1.16
HDAC9-217ENST00000455069 MEF2BQ02080 365 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-217ENST00000455069 CFAP126Q5VTH2 177 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 UPK3BQ9BT76 320 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 IL36BQ9NZH7 164 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 ICOSQ9Y6W8 199 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 FAT2Q9NYQ8 4349 aa7.79□□□□□ -1.16
HDAC9-217ENST00000455069 TMSB15BA0A087X1C1 80 aa7.78□□□□□ -1.16
HDAC9-217ENST00000455069 TEX46H3BTG2 121 aa7.78□□□□□ -1.16
HDAC9-217ENST00000455069 K7EQD1 137 aa7.78□□□□□ -1.16
HDAC9-217ENST00000455069 IGLV2-8P01709 118 aa7.78□□□□□ -1.16
HDAC9-217ENST00000455069 GATA1P15976 413 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-217ENST00000455069 RPL19P84098 196 aaKnown RBP7.78□□□□□ -1.16
HDAC9-217ENST00000455069 SLAQ13239 276 aa7.78□□□□□ -1.16
HDAC9-217ENST00000455069 BAGE2Q86Y30 109 aa7.78□□□□□ -1.16
HDAC9-217ENST00000455069 KRTAP1-5Q9BYS1 174 aa7.78□□□□□ -1.16
HDAC9-217ENST00000455069 JPT2Q9H910 190 aa7.78□□□□□ -1.16
HDAC9-217ENST00000455069 MRPS16Q9Y3D3 137 aaKnown RBP7.78□□□□□ -1.16
HDAC9-217ENST00000455069 PKHD1P08F94 4074 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 TRBV20OR9-2A0A075B6H5 130 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 IGHV3-73A0A0B4J1V6 119 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 NBDYA0A0U1RRE5 68 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 ARMS2P0C7Q2 107 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 GYPEP15421 78 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 S100A4P26447 101 aaKnown RBP7.77□□□□□ -1.17
HDAC9-217ENST00000455069 CENPWQ5EE01 88 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 LYPD6BQ8NI32 183 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 TXNDC17Q9BRA2 123 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 PARLQ9H300 379 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 SCRT2Q9NQ03 307 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 DNAH17Q9UFH2 4485 aa7.77□□□□□ -1.17
HDAC9-217ENST00000455069 RAB19A4D1S5 217 aa7.76□□□□□ -1.17
HDAC9-217ENST00000455069 IFNA1P01562 189 aa7.76□□□□□ -1.17
HDAC9-217ENST00000455069 MRPL23Q16540 153 aaKnown RBP7.76□□□□□ -1.17
HDAC9-217ENST00000455069 PIK3CD-AS1Q5SR53 167 aa7.76□□□□□ -1.17
HDAC9-217ENST00000455069 PRR27Q6MZM9 219 aa7.76□□□□□ -1.17
HDAC9-217ENST00000455069 UFSP1Q6NVU6 142 aa7.76□□□□□ -1.17
HDAC9-217ENST00000455069 Q6ZSN1 163 aa7.76□□□□□ -1.17
HDAC9-217ENST00000455069 SLC25A29Q8N8R3 303 aa7.76□□□□□ -1.17
HDAC9-217ENST00000455069 SAMD10Q9BYL1 202 aa7.76□□□□□ -1.17
HDAC9-217ENST00000455069 Q9H8V8 135 aa7.76□□□□□ -1.17
HDAC9-217ENST00000455069 VAX2Q9UIW0 290 aa7.76□□□□□ -1.17
HDAC9-217ENST00000455069 PDE6DO43924 150 aa7.75□□□□□ -1.17
HDAC9-217ENST00000455069 SRIP30626 198 aa7.75□□□□□ -1.17
HDAC9-217ENST00000455069 LYPD5Q6UWN5 251 aa7.75□□□□□ -1.17
HDAC9-217ENST00000455069 NEGR1Q7Z3B1 354 aa7.75□□□□□ -1.17
HDAC9-217ENST00000455069 PCLOQ9Y6V0 5065 aa7.75□□□□□ -1.17
HDAC9-217ENST00000455069 A0A1B0GVY2 172 aa7.74□□□□□ -1.17
HDAC9-217ENST00000455069 A8MWV9 139 aa7.74□□□□□ -1.17
HDAC9-217ENST00000455069 CXCL1P09341 107 aa7.74□□□□□ -1.17
HDAC9-217ENST00000455069 MED14OSP0DP75 135 aa7.74□□□□□ -1.17
HDAC9-217ENST00000455069 MED9Q9NWA0 146 aa7.74□□□□□ -1.17
HDAC9-217ENST00000455069 Q9UF83 564 aa7.74□□□□□ -1.17
HDAC9-217ENST00000455069 TRBV6-4A0A1B0GX49 114 aa7.73□□□□□ -1.17
HDAC9-217ENST00000455069 C19orf71A6NCJ1 209 aa7.73□□□□□ -1.17
HDAC9-217ENST00000455069 SNAI2O43623 268 aa7.73□□□□□ -1.17
HDAC9-217ENST00000455069 CIDEAO60543 219 aa7.73□□□□□ -1.17
HDAC9-217ENST00000455069 NXPH4O95158 308 aa7.73□□□□□ -1.17
HDAC9-217ENST00000455069 TAGLN2P37802 199 aaKnown RBP7.73□□□□□ -1.17
HDAC9-217ENST00000455069 BLOC1S1P78537 153 aa7.73□□□□□ -1.17
HDAC9-217ENST00000455069 C1orf134Q5TEV5 83 aa7.73□□□□□ -1.17
HDAC9-217ENST00000455069 ZFP2Q6ZN57 461 aa7.73□□□□□ -1.17
HDAC9-217ENST00000455069 LINC00336Q6ZUF6 198 aa7.73□□□□□ -1.17
HDAC9-217ENST00000455069 OR10AG1Q8NH19 301 aa7.73□□□□□ -1.17
HDAC9-217ENST00000455069 PCNPQ8WW12 178 aaKnown RBP7.73□□□□□ -1.17
HDAC9-217ENST00000455069 SMIM12Q96EX1 92 aa7.73□□□□□ -1.17
HDAC9-217ENST00000455069 DNAH11Q96DT5 4516 aa7.72□□□□□ -1.17
HDAC9-217ENST00000455069 RBFOX3A6NFN3 312 aa7.72□□□□□ -1.17
HDAC9-217ENST00000455069 PRSS29PA6NIE9 313 aa7.72□□□□□ -1.17
HDAC9-217ENST00000455069 M0R381 172 aa7.72□□□□□ -1.17
HDAC9-217ENST00000455069 CRYGDP07320 174 aa7.72□□□□□ -1.17
HDAC9-217ENST00000455069 LINC00694P0DN24 101 aa7.72□□□□□ -1.17
HDAC9-217ENST00000455069 MGST1P10620 155 aaKnown RBP7.72□□□□□ -1.17
HDAC9-217ENST00000455069 GNG4P50150 75 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms