RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 IGHV1OR15-1A0A075B7D0 117 aa7.94□□□□□ -1.14
SCN9A-205ENST00000454569 HIGD1CA8MV81 97 aa7.94□□□□□ -1.14
SCN9A-205ENST00000454569 SPINK4O60575 86 aa7.94□□□□□ -1.14
SCN9A-205ENST00000454569 LINC01587Q99440 93 aa7.94□□□□□ -1.14
SCN9A-205ENST00000454569 RETNQ9HD89 108 aa7.94□□□□□ -1.14
SCN9A-205ENST00000454569 MDFICQ9P1T7 246 aa7.94□□□□□ -1.14
SCN9A-205ENST00000454569 KIR2DL5BA0A0G2JN68 375 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 KIR2DL5BA0A0G2JPC4 375 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 XKRY2A2RUG3 117 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 FAM231BA6NCW3 169 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 RNASE3P12724 160 aaKnown RBP7.93□□□□□ -1.14
SCN9A-205ENST00000454569 DEFB121Q5J5C9 76 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 MRPL54Q6P161 138 aaKnown RBP7.93□□□□□ -1.14
SCN9A-205ENST00000454569 ZNF705AQ6ZN79 300 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-205ENST00000454569 SBSPONQ8IVN8 264 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 KIR2DL5AQ8N109 375 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 ZFP82Q8N141 532 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 NUP35Q8NFH5 326 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 KIR2DL5BQ8NHK3 375 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 CBY1Q9Y3M2 126 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 AMBPP02760 352 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 TRGC2P03986 189 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 RPS20P60866 119 aaKnown RBP7.93□□□□□ -1.14
SCN9A-205ENST00000454569 TDRG1Q3Y452 100 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 FAM159AQ6UWV7 190 aa7.93□□□□□ -1.14
SCN9A-205ENST00000454569 IGHV3-16A0A0C4DH30 117 aa7.92□□□□□ -1.14
SCN9A-205ENST00000454569 PCP4L1A6NKN8 68 aa7.92□□□□□ -1.14
SCN9A-205ENST00000454569 IGLC6P0CF74 106 aa7.92□□□□□ -1.14
SCN9A-205ENST00000454569 APOC4P55056 127 aa7.92□□□□□ -1.14
SCN9A-205ENST00000454569 COX19Q49B96 90 aa7.92□□□□□ -1.14
SCN9A-205ENST00000454569 WDR73Q6P4I2 378 aa7.92□□□□□ -1.14
SCN9A-205ENST00000454569 MRAPQ8TCY5 172 aa7.92□□□□□ -1.14
SCN9A-205ENST00000454569 PGLYRP4Q96LB8 373 aa7.92□□□□□ -1.14
SCN9A-205ENST00000454569 TMEM208Q9BTX3 173 aa7.92□□□□□ -1.14
SCN9A-205ENST00000454569 TIMM8BQ9Y5J9 83 aaPredicted RBP7.92□□□□□ -1.14
SCN9A-205ENST00000454569 TRAPPC1Q9Y5R8 145 aa7.92□□□□□ -1.14
SCN9A-205ENST00000454569 PLAC8L1A1L4L8 177 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 CBY3A6NI87 242 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 SNURFLB1AK76 121 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 H3BVH4 76 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 ARMS2P0C7Q2 107 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 RAB4BP61018 213 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 RASL11AQ6T310 242 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 LYZL1Q6UWQ5 148 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 ATP5L2Q7Z4Y8 100 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 C11orf72Q8NBR9 251 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 FRZBQ92765 325 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 BORCS7Q96B45 105 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 C20orf144Q9BQM9 153 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 C1QTNF4Q9BXJ3 329 aa7.91□□□□□ -1.14
SCN9A-205ENST00000454569 MT-ND6P03923 174 aa7.9□□□□□ -1.14
SCN9A-205ENST00000454569 FABP9Q0Z7S8 132 aa7.9□□□□□ -1.14
SCN9A-205ENST00000454569 OR10AG1Q8NH19 301 aa7.9□□□□□ -1.14
SCN9A-205ENST00000454569 RNF183Q96D59 192 aa7.9□□□□□ -1.14
SCN9A-205ENST00000454569 OVOL2Q9BRP0 275 aa7.9□□□□□ -1.14
SCN9A-205ENST00000454569 LINC00467Q9BRT7 94 aa7.9□□□□□ -1.14
SCN9A-205ENST00000454569 TPPP3Q9BW30 176 aa7.9□□□□□ -1.14
SCN9A-205ENST00000454569 GNB1LQ9BYB4 327 aa7.9□□□□□ -1.14
SCN9A-205ENST00000454569 GSN-AS1Q9NRJ2 163 aa7.9□□□□□ -1.14
SCN9A-205ENST00000454569 MSRB1Q9NZV6 116 aa7.9□□□□□ -1.14
SCN9A-205ENST00000454569 DEFB4AO15263 64 aa7.89□□□□□ -1.15
SCN9A-205ENST00000454569 HLA-DQA1P01909 254 aa7.89□□□□□ -1.15
SCN9A-205ENST00000454569 FOXA3P55318 350 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-205ENST00000454569 HBBP68871 147 aa7.89□□□□□ -1.15
SCN9A-205ENST00000454569 DNLZQ5SXM8 178 aa7.89□□□□□ -1.15
SCN9A-205ENST00000454569 TMEM256Q8N2U0 113 aa7.89□□□□□ -1.15
SCN9A-205ENST00000454569 RNASE8Q8TDE3 154 aaKnown RBP7.89□□□□□ -1.15
SCN9A-205ENST00000454569 KCNS1Q96KK3 526 aa7.89□□□□□ -1.15
SCN9A-205ENST00000454569 C9orf85Q96MD7 179 aa7.89□□□□□ -1.15
SCN9A-205ENST00000454569 GOLT1BQ9Y3E0 138 aa7.89□□□□□ -1.15
SCN9A-205ENST00000454569 A0A1B0GXF2 115 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 UBE2CO00762 179 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 SNAI2O43623 268 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 HIST1H2BKO60814 126 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 HIST1H2BJP06899 126 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 TRGC1P0CF51 173 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 HIST1H2BOP23527 126 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 HIST1H2BBP33778 126 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 ASIPP42127 132 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 CAMPP49913 170 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 HIST1H2BDP58876 126 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 HIST1H2BCP62807 126 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 DEFA6Q01524 100 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 HIST2H2BEQ16778 126 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-205ENST00000454569 TMEM136Q6ZRR5 245 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 Q6ZWC4 215 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 FER1L6-AS1Q8NA97 138 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 OR11H2Q8NH07 326 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 HIST1H2BHQ93079 126 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 RCHY1Q96PM5 261 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 HIST1H2BNQ99877 126 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 HIST1H2BMQ99879 126 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 SCRT2Q9NQ03 307 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 A0A1B0GUT8 65 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 PHOX2AO14813 284 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 CTRLP40313 264 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 RIGQ13278 110 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 IL17DQ8TAD2 202 aa7.88□□□□□ -1.15
SCN9A-205ENST00000454569 JPT2Q9H910 190 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms