RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 LINC01545Q5VT33 79 aa1.27□□□□□ -2.21
HMGN3P1-201ENST00000453847 DEFB132Q7Z7B7 95 aa1.27□□□□□ -2.21
HMGN3P1-201ENST00000453847 TMEM191AQ9H0A3 160 aa1.27□□□□□ -2.21
HMGN3P1-201ENST00000453847 HELZ2Q9BYK8 2649 aaKnown RBP1.27□□□□□ -2.21
HMGN3P1-201ENST00000453847 MYH7P12883 1935 aa1.27□□□□□ -2.21
HMGN3P1-201ENST00000453847 RREB1Q92766 1687 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 BCL9LQ86UU0 1499 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 LOC101927531A0A1B0GV80 90 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 SLC25A6P12236 298 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 SELENOWP63302 87 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 EMX2Q04743 252 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 RPL13AP3Q6NVV1 102 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 ATOH7Q8N100 152 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 VSTM2AQ8TAG5 236 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 DMAC1Q96GE9 116 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 SAR1AQ9NR31 198 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 MRPL35Q9NZE8 188 aaKnown RBP1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 BOKQ9UMX3 212 aaPredicted RBP1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 SPEF2Q9C093 1822 aa1.26□□□□□ -2.21
HMGN3P1-201ENST00000453847 SNRNP200O75643 2136 aaKnown RBP1.25□□□□□ -2.21
HMGN3P1-201ENST00000453847 ATG2AQ2TAZ0 1938 aa1.25□□□□□ -2.21
HMGN3P1-201ENST00000453847 TRAV2A0A0B4J234 112 aa1.25□□□□□ -2.21
HMGN3P1-201ENST00000453847 PYYP10082 97 aa1.25□□□□□ -2.21
HMGN3P1-201ENST00000453847 UNQ5815/PRO19632Q6UWF5 114 aa1.25□□□□□ -2.21
HMGN3P1-201ENST00000453847 PPDPFLQ8WWR9 84 aa1.25□□□□□ -2.21
HMGN3P1-201ENST00000453847 DPH3Q96FX2 82 aa1.25□□□□□ -2.21
HMGN3P1-201ENST00000453847 LAMB1P07942 1786 aa1.25□□□□□ -2.21
HMGN3P1-201ENST00000453847 BCORL1Q5H9F3 1711 aa1.25□□□□□ -2.21
HMGN3P1-201ENST00000453847 ZNF142P52746 1687 aaPredicted RBP1.25□□□□□ -2.21
HMGN3P1-201ENST00000453847 NALCNQ8IZF0 1738 aa1.24□□□□□ -2.21
HMGN3P1-201ENST00000453847 TRBV10-1A0A0K0K1A3 114 aa1.24□□□□□ -2.21
HMGN3P1-201ENST00000453847 LOC100130705A0A1B0GUX0 176 aa1.24□□□□□ -2.21
HMGN3P1-201ENST00000453847 LINC00587B1AMM8 73 aa1.24□□□□□ -2.21
HMGN3P1-201ENST00000453847 FXYD3Q14802 87 aa1.24□□□□□ -2.21
HMGN3P1-201ENST00000453847 C1orf54Q8WWF1 131 aa1.24□□□□□ -2.21
HMGN3P1-201ENST00000453847 ATG5Q9H1Y0 275 aa1.24□□□□□ -2.21
HMGN3P1-201ENST00000453847 ROCK2O75116 1388 aaKnown RBP1.23□□□□□ -2.21
HMGN3P1-201ENST00000453847 CCL19Q99731 98 aa1.23□□□□□ -2.21
HMGN3P1-201ENST00000453847 NDUFA12Q9UI09 145 aa1.23□□□□□ -2.21
HMGN3P1-201ENST00000453847 AFDNP55196 1824 aaKnown RBP1.23□□□□□ -2.21
HMGN3P1-201ENST00000453847 CNTRLQ7Z7A1 2325 aa1.23□□□□□ -2.21
HMGN3P1-201ENST00000453847 LAMA4Q16363 1823 aa1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 ASCC3Q8N3C0 2202 aaKnown RBP1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 SPAARA0A1B0GVQ0 90 aa1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 DLEU1O43261 78 aa1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 PIRTP0C851 137 aa1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 XAF1Q6GPH4 301 aa1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 SCIMPQ6UWF3 145 aa1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 LINC00575Q6W349 94 aa1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 Q8N6K4 173 aa1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 C5orf56Q8N8D9 126 aa1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 LINC00208Q96KT6 92 aa1.22□□□□□ -2.21
HMGN3P1-201ENST00000453847 QRICH2Q9H0J4 1663 aa1.21□□□□□ -2.22
HMGN3P1-201ENST00000453847 TRAV12-2A0A075B6T6 113 aa1.21□□□□□ -2.22
HMGN3P1-201ENST00000453847 HIGD1CA8MV81 97 aa1.21□□□□□ -2.22
HMGN3P1-201ENST00000453847 CCKP06307 115 aa1.21□□□□□ -2.22
HMGN3P1-201ENST00000453847 GUCA1AP43080 201 aaPredicted RBP1.21□□□□□ -2.22
HMGN3P1-201ENST00000453847 Q86TA4 180 aa1.21□□□□□ -2.22
HMGN3P1-201ENST00000453847 KRTAP5-8O75690 187 aa1.2□□□□□ -2.22
HMGN3P1-201ENST00000453847 ARL14EPLP0DKL9 152 aa1.2□□□□□ -2.22
HMGN3P1-201ENST00000453847 NPC2P61916 151 aa1.2□□□□□ -2.22
HMGN3P1-201ENST00000453847 SPCS2Q15005 226 aa1.2□□□□□ -2.22
HMGN3P1-201ENST00000453847 OR2T2Q6IF00 324 aa1.2□□□□□ -2.22
HMGN3P1-201ENST00000453847 Q6ZQY7 126 aa1.2□□□□□ -2.22
HMGN3P1-201ENST00000453847 LSM10Q969L4 123 aaKnown RBP1.2□□□□□ -2.22
HMGN3P1-201ENST00000453847 IFI27L1Q96BM0 104 aa1.2□□□□□ -2.22
HMGN3P1-201ENST00000453847 PSMG3Q9BT73 122 aaPredicted RBP1.2□□□□□ -2.22
HMGN3P1-201ENST00000453847 CCDC167Q9P0B6 97 aa1.2□□□□□ -2.22
HMGN3P1-201ENST00000453847 BLMP54132 1417 aaPredicted RBP1.2□□□□□ -2.22
HMGN3P1-201ENST00000453847 CCDC179H3BU77 68 aa1.19□□□□□ -2.22
HMGN3P1-201ENST00000453847 HIST1H1DP16402 221 aaKnown RBP1.19□□□□□ -2.22
HMGN3P1-201ENST00000453847 KCNRGQ8N5I3 272 aa1.19□□□□□ -2.22
HMGN3P1-201ENST00000453847 C2orf88Q9BSF0 95 aa1.19□□□□□ -2.22
HMGN3P1-201ENST00000453847 PDCD10Q9BUL8 212 aa1.19□□□□□ -2.22
HMGN3P1-201ENST00000453847 MYH9P35579 1960 aaKnown RBP1.19□□□□□ -2.22
HMGN3P1-201ENST00000453847 FAM25AB3EWG3 89 aa1.18□□□□□ -2.22
HMGN3P1-201ENST00000453847 FAM25CB3EWG5 89 aa1.18□□□□□ -2.22
HMGN3P1-201ENST00000453847 FAM25GB3EWG6 89 aa1.18□□□□□ -2.22
HMGN3P1-201ENST00000453847 SPANXN1Q5VSR9 72 aa1.18□□□□□ -2.22
HMGN3P1-201ENST00000453847 SLC48A1Q6P1K1 146 aa1.18□□□□□ -2.22
HMGN3P1-201ENST00000453847 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.18□□□□□ -2.22
HMGN3P1-201ENST00000453847 SNRNP25Q9BV90 132 aaKnown RBP1.18□□□□□ -2.22
HMGN3P1-201ENST00000453847 SEC11CQ9BY50 192 aa1.18□□□□□ -2.22
HMGN3P1-201ENST00000453847 PLXNA1Q9UIW2 1896 aa1.18□□□□□ -2.22
HMGN3P1-201ENST00000453847 SPTBP11277 2137 aa1.18□□□□□ -2.22
HMGN3P1-201ENST00000453847 OTOGLQ3ZCN5 2332 aa1.17□□□□□ -2.22
HMGN3P1-201ENST00000453847 CUL7Q14999 1698 aa1.17□□□□□ -2.22
HMGN3P1-201ENST00000453847 TRBV30A0A0K0K1B3 111 aa1.17□□□□□ -2.22
HMGN3P1-201ENST00000453847 APODP05090 189 aa1.17□□□□□ -2.22
HMGN3P1-201ENST00000453847 IL5P05113 134 aa1.17□□□□□ -2.22
HMGN3P1-201ENST00000453847 MEIG1Q5JSS6 88 aa1.17□□□□□ -2.22
HMGN3P1-201ENST00000453847 TSKUQ8WUA8 353 aa1.17□□□□□ -2.22
HMGN3P1-201ENST00000453847 C10orf82Q8WW14 230 aa1.17□□□□□ -2.22
HMGN3P1-201ENST00000453847 AGPAT4-IT1Q9H0P7 198 aa1.17□□□□□ -2.22
HMGN3P1-201ENST00000453847 TMEM242Q9NWH2 141 aa1.17□□□□□ -2.22
HMGN3P1-201ENST00000453847 CFTRP13569 1480 aa1.17□□□□□ -2.22
HMGN3P1-201ENST00000453847 ABCA4P78363 2273 aa1.16□□□□□ -2.22
HMGN3P1-201ENST00000453847 CAV3P56539 151 aa1.16□□□□□ -2.22
HMGN3P1-201ENST00000453847 NDUFA11Q86Y39 141 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms