RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 IGKV3D-20A0A0C4DH25 116 aa12.65□□□□□ -0.38
PDLIM2-214ENST00000452226 AKR1C3P42330 323 aa12.65□□□□□ -0.38
PDLIM2-214ENST00000452226 UBE2G1P62253 170 aa12.65□□□□□ -0.38
PDLIM2-214ENST00000452226 SLAQ13239 276 aa12.65□□□□□ -0.38
PDLIM2-214ENST00000452226 PRO0255Q9UI72 69 aa12.65□□□□□ -0.38
PDLIM2-214ENST00000452226 TRAV4A0A0B4J268 109 aa12.64□□□□□ -0.39
PDLIM2-214ENST00000452226 SCO2A0A1W2PP80 73 aa12.64□□□□□ -0.39
PDLIM2-214ENST00000452226 PAX4O43316 350 aa12.64□□□□□ -0.39
PDLIM2-214ENST00000452226 S100A9P06702 114 aaKnown RBP12.64□□□□□ -0.39
PDLIM2-214ENST00000452226 RNASE3P12724 160 aaKnown RBP12.64□□□□□ -0.39
PDLIM2-214ENST00000452226 CRYBA4P53673 196 aa12.64□□□□□ -0.39
PDLIM2-214ENST00000452226 PTH2Q96A98 100 aa12.64□□□□□ -0.39
PDLIM2-214ENST00000452226 ZNF479Q96JC4 524 aa12.64□□□□□ -0.39
PDLIM2-214ENST00000452226 MANBALQ9NQG1 85 aa12.64□□□□□ -0.39
PDLIM2-214ENST00000452226 SFTA3P0C7M3 94 aa12.63□□□□□ -0.39
PDLIM2-214ENST00000452226 BTF3P20290 206 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-214ENST00000452226 ZNF674Q2M3X9 581 aa12.63□□□□□ -0.39
PDLIM2-214ENST00000452226 HHLA3Q9XRX5 114 aa12.63□□□□□ -0.39
PDLIM2-214ENST00000452226 ICOSQ9Y6W8 199 aa12.63□□□□□ -0.39
PDLIM2-214ENST00000452226 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
PDLIM2-214ENST00000452226 MLST8Q9BVC4 326 aa12.62□□□□□ -0.39
PDLIM2-214ENST00000452226 GNG13Q9P2W3 67 aa12.62□□□□□ -0.39
PDLIM2-214ENST00000452226 SIVA1O15304 175 aa12.61□□□□□ -0.39
PDLIM2-214ENST00000452226 SH2D1AO60880 128 aa12.61□□□□□ -0.39
PDLIM2-214ENST00000452226 ZNF876PQ49A33 203 aa12.61□□□□□ -0.39
PDLIM2-214ENST00000452226 DNLZQ5SXM8 178 aa12.61□□□□□ -0.39
PDLIM2-214ENST00000452226 FAM162BQ5T6X4 162 aa12.61□□□□□ -0.39
PDLIM2-214ENST00000452226 OR4C5Q8NGB2 326 aa12.61□□□□□ -0.39
PDLIM2-214ENST00000452226 C11orf52Q96A22 123 aa12.61□□□□□ -0.39
PDLIM2-214ENST00000452226 TXNDC17Q9BRA2 123 aa12.61□□□□□ -0.39
PDLIM2-214ENST00000452226 APOBP04114 4563 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-214ENST00000452226 TRGV4A0A0C4DH28 118 aa12.6□□□□□ -0.39
PDLIM2-214ENST00000452226 KRBOX1C9JBD0 128 aa12.6□□□□□ -0.39
PDLIM2-214ENST00000452226 ORM1P02763 201 aa12.6□□□□□ -0.39
PDLIM2-214ENST00000452226 LINC00315P59091 139 aa12.6□□□□□ -0.39
PDLIM2-214ENST00000452226 KRTAP10-2P60368 255 aa12.6□□□□□ -0.39
PDLIM2-214ENST00000452226 PGPEP1LA6NFU8 196 aa12.59□□□□□ -0.39
PDLIM2-214ENST00000452226 B4DEV8 164 aa12.59□□□□□ -0.39
PDLIM2-214ENST00000452226 RS1O15537 224 aa12.59□□□□□ -0.39
PDLIM2-214ENST00000452226 NXPH4O95158 308 aa12.59□□□□□ -0.39
PDLIM2-214ENST00000452226 LINC01559Q495D7 138 aa12.59□□□□□ -0.39
PDLIM2-214ENST00000452226 PIK3CD-AS1Q5SR53 167 aa12.59□□□□□ -0.39
PDLIM2-214ENST00000452226 BAGE2Q86Y30 109 aa12.59□□□□□ -0.39
PDLIM2-214ENST00000452226 Q8N1X5 172 aa12.59□□□□□ -0.39
PDLIM2-214ENST00000452226 IL36BQ9NZH7 164 aa12.59□□□□□ -0.39
PDLIM2-214ENST00000452226 DNAH5Q8TE73 4624 aa12.58□□□□□ -0.39
PDLIM2-214ENST00000452226 C9JCJ5 164 aa12.58□□□□□ -0.4
PDLIM2-214ENST00000452226 ASIPP42127 132 aa12.58□□□□□ -0.4
PDLIM2-214ENST00000452226 ZNF506Q5JVG8 444 aa12.58□□□□□ -0.4
PDLIM2-214ENST00000452226 CFAP126Q5VTH2 177 aa12.58□□□□□ -0.4
PDLIM2-214ENST00000452226 NHLRC2Q8NBF2 726 aa12.58□□□□□ -0.4
PDLIM2-214ENST00000452226 M0R036 132 aa12.57□□□□□ -0.4
PDLIM2-214ENST00000452226 CIDEAO60543 219 aa12.57□□□□□ -0.4
PDLIM2-214ENST00000452226 GATA1P15976 413 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-214ENST00000452226 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-214ENST00000452226 RPL35P42766 123 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-214ENST00000452226 MRPL23Q16540 153 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-214ENST00000452226 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
PDLIM2-214ENST00000452226 NKX2-5P52952 324 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-214ENST00000452226 MEF2BQ02080 365 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-214ENST00000452226 LYPD5Q6UWN5 251 aa12.56□□□□□ -0.4
PDLIM2-214ENST00000452226 ALKAL2Q6UX46 152 aa12.56□□□□□ -0.4
PDLIM2-214ENST00000452226 Q6ZRN7 208 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-214ENST00000452226 DERL1Q9BUN8 251 aa12.56□□□□□ -0.4
PDLIM2-214ENST00000452226 K7EQD1 137 aa12.55□□□□□ -0.4
PDLIM2-214ENST00000452226 IFNA1P01562 189 aa12.55□□□□□ -0.4
PDLIM2-214ENST00000452226 BCL2P10415 239 aa12.55□□□□□ -0.4
PDLIM2-214ENST00000452226 NEGR1Q7Z3B1 354 aa12.55□□□□□ -0.4
PDLIM2-214ENST00000452226 BOLA1Q9Y3E2 137 aa12.55□□□□□ -0.4
PDLIM2-214ENST00000452226 GRIFINA4D1Z8 144 aa12.54□□□□□ -0.4
PDLIM2-214ENST00000452226 H3BVH4 76 aa12.54□□□□□ -0.4
PDLIM2-214ENST00000452226 PDE6DO43924 150 aa12.54□□□□□ -0.4
PDLIM2-214ENST00000452226 ARMS2P0C7Q2 107 aa12.54□□□□□ -0.4
PDLIM2-214ENST00000452226 LYPD6BQ8NI32 183 aa12.54□□□□□ -0.4
PDLIM2-214ENST00000452226 GYPEP15421 78 aa12.53□□□□□ -0.4
PDLIM2-214ENST00000452226 TAGLN2P37802 199 aaKnown RBP12.53□□□□□ -0.4
PDLIM2-214ENST00000452226 BLOC1S1P78537 153 aa12.53□□□□□ -0.4
PDLIM2-214ENST00000452226 VAX2Q9UIW0 290 aa12.53□□□□□ -0.4
PDLIM2-214ENST00000452226 TNFRSF18Q9Y5U5 241 aa12.53□□□□□ -0.4
PDLIM2-214ENST00000452226 TMSB15BA0A087X1C1 80 aa12.52□□□□□ -0.41
PDLIM2-214ENST00000452226 A8MWV9 139 aa12.52□□□□□ -0.41
PDLIM2-214ENST00000452226 IGLV2-8P01709 118 aa12.52□□□□□ -0.41
PDLIM2-214ENST00000452226 CXCL1P09341 107 aa12.52□□□□□ -0.41
PDLIM2-214ENST00000452226 SRIP30626 198 aa12.52□□□□□ -0.41
PDLIM2-214ENST00000452226 DMRTA1Q5VZB9 504 aa12.52□□□□□ -0.41
PDLIM2-214ENST00000452226 ZFP2Q6ZN57 461 aa12.52□□□□□ -0.41
PDLIM2-214ENST00000452226 SLC25A29Q8N8R3 303 aa12.52□□□□□ -0.41
PDLIM2-214ENST00000452226 TRBV6-4A0A1B0GX49 114 aa12.51□□□□□ -0.41
PDLIM2-214ENST00000452226 UFSP1Q6NVU6 142 aa12.51□□□□□ -0.41
PDLIM2-214ENST00000452226 PCNPQ8WW12 178 aaKnown RBP12.51□□□□□ -0.41
PDLIM2-214ENST00000452226 PARLQ9H300 379 aa12.51□□□□□ -0.41
PDLIM2-214ENST00000452226 TRAV9-2A0A087WT02 112 aa12.5□□□□□ -0.41
PDLIM2-214ENST00000452226 LOC100131303A0A0U1RQF7 123 aa12.5□□□□□ -0.41
PDLIM2-214ENST00000452226 RAB19A4D1S5 217 aa12.5□□□□□ -0.41
PDLIM2-214ENST00000452226 EREGO14944 169 aa12.5□□□□□ -0.41
PDLIM2-214ENST00000452226 ERVFC1-1P60608 527 aa12.5□□□□□ -0.41
PDLIM2-214ENST00000452226 RPL19P84098 196 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-214ENST00000452226 CENPWQ5EE01 88 aa12.5□□□□□ -0.41
PDLIM2-214ENST00000452226 NFE4Q86UQ8 179 aa12.5□□□□□ -0.41
PDLIM2-214ENST00000452226 SMIM12Q96EX1 92 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms