RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 C9orf85Q96MD7 179 aa14.91□□□□□ -0.02
CPSF7-208ENST00000450000 ARL2-SNX15V9GYD0 113 aa14.91□□□□□ -0.02
CPSF7-208ENST00000450000 MGST1P10620 155 aaKnown RBP14.9□□□□□ -0.02
CPSF7-208ENST00000450000 ASIPP42127 132 aa14.9□□□□□ -0.02
CPSF7-208ENST00000450000 TIRAPP58753 221 aa14.9□□□□□ -0.02
CPSF7-208ENST00000450000 ZNF506Q5JVG8 444 aa14.9□□□□□ -0.02
CPSF7-208ENST00000450000 CDPF1Q6NVV7 123 aa14.9□□□□□ -0.02
CPSF7-208ENST00000450000 PCLOQ9Y6V0 5065 aa14.9□□□□□ -0.02
CPSF7-208ENST00000450000 PGPEP1LA6NFU8 196 aa14.89□□□□□ -0.03
CPSF7-208ENST00000450000 ZNF726P1Q15940 193 aa14.89□□□□□ -0.03
CPSF7-208ENST00000450000 PTH2Q96A98 100 aa14.89□□□□□ -0.03
CPSF7-208ENST00000450000 MAP1LC3B2A6NCE7 125 aa14.88□□□□□ -0.03
CPSF7-208ENST00000450000 A8MWV9 139 aa14.88□□□□□ -0.03
CPSF7-208ENST00000450000 UBE2G1P62253 170 aa14.88□□□□□ -0.03
CPSF7-208ENST00000450000 MAP1LC3BQ9GZQ8 125 aa14.88□□□□□ -0.03
CPSF7-208ENST00000450000 SCRT2Q9NQ03 307 aa14.88□□□□□ -0.03
CPSF7-208ENST00000450000 RYR1P21817 5038 aa14.87□□□□□ -0.03
CPSF7-208ENST00000450000 A0A087WTM6 91 aa14.87□□□□□ -0.03
CPSF7-208ENST00000450000 FAM74A7A6NL05 159 aa14.87□□□□□ -0.03
CPSF7-208ENST00000450000 B4DEV8 164 aa14.87□□□□□ -0.03
CPSF7-208ENST00000450000 RNASE3P12724 160 aaKnown RBP14.87□□□□□ -0.03
CPSF7-208ENST00000450000 DPPA3Q6W0C5 159 aa14.87□□□□□ -0.03
CPSF7-208ENST00000450000 SYT8Q8NBV8 401 aa14.87□□□□□ -0.03
CPSF7-208ENST00000450000 ATP6V0E2Q8NHE4 81 aa14.87□□□□□ -0.03
CPSF7-208ENST00000450000 CST9LP1Q5W188 147 aa14.86□□□□□ -0.03
CPSF7-208ENST00000450000 Q86TA4 180 aa14.86□□□□□ -0.03
CPSF7-208ENST00000450000 Q8N1X5 172 aa14.86□□□□□ -0.03
CPSF7-208ENST00000450000 KRTAP4-5Q9BYR2 181 aa14.86□□□□□ -0.03
CPSF7-208ENST00000450000 ZFP30Q9Y2G7 519 aa14.86□□□□□ -0.03
CPSF7-208ENST00000450000 IGKV3D-20A0A0C4DH25 116 aa14.85□□□□□ -0.03
CPSF7-208ENST00000450000 LRP1BQ9NZR2 4599 aa14.84□□□□□ -0.03
CPSF7-208ENST00000450000 LINC01556Q5JQF7 62 aa14.84□□□□□ -0.03
CPSF7-208ENST00000450000 LELP1Q5T871 98 aa14.84□□□□□ -0.03
CPSF7-208ENST00000450000 FMC1Q96HJ9 113 aa14.84□□□□□ -0.03
CPSF7-208ENST00000450000 GTSF1LQ9H1H1 148 aa14.84□□□□□ -0.03
CPSF7-208ENST00000450000 M0R036 132 aa14.83□□□□□ -0.04
CPSF7-208ENST00000450000 IGHV3-30P01768 117 aa14.83□□□□□ -0.04
CPSF7-208ENST00000450000 IGHV3-33P01772 117 aa14.83□□□□□ -0.04
CPSF7-208ENST00000450000 IGHV3-30-3P0DP02 117 aa14.83□□□□□ -0.04
CPSF7-208ENST00000450000 IGHV3-30-5P0DP03 117 aa14.83□□□□□ -0.04
CPSF7-208ENST00000450000 FUSP35637 526 aaKnown RBP eCLIP14.83□□□□□ -0.04
CPSF7-208ENST00000450000 FAM162BQ5T6X4 162 aa14.83□□□□□ -0.04
CPSF7-208ENST00000450000 ZFP2Q6ZN57 461 aa14.83□□□□□ -0.04
CPSF7-208ENST00000450000 TCEAL7Q9BRU2 100 aa14.83□□□□□ -0.04
CPSF7-208ENST00000450000 PARLQ9H300 379 aa14.83□□□□□ -0.04
CPSF7-208ENST00000450000 Q9HAA7 133 aa14.83□□□□□ -0.04
CPSF7-208ENST00000450000 H3BVH4 76 aa14.82□□□□□ -0.04
CPSF7-208ENST00000450000 PIK3CD-AS1Q5SR53 167 aa14.82□□□□□ -0.04
CPSF7-208ENST00000450000 IL36BQ9NZH7 164 aa14.82□□□□□ -0.04
CPSF7-208ENST00000450000 GAGE12JA6NER3 117 aa14.81□□□□□ -0.04
CPSF7-208ENST00000450000 AKR1C3P42330 323 aa14.81□□□□□ -0.04
CPSF7-208ENST00000450000 GAGE1Q13065 139 aa14.81□□□□□ -0.04
CPSF7-208ENST00000450000 GAGE4Q13068 117 aa14.81□□□□□ -0.04
CPSF7-208ENST00000450000 GAGE5Q13069 117 aa14.81□□□□□ -0.04
CPSF7-208ENST00000450000 GAGE13Q4V321 117 aa14.81□□□□□ -0.04
CPSF7-208ENST00000450000 OR11H4Q8NGC9 324 aa14.81□□□□□ -0.04
CPSF7-208ENST00000450000 CYTL1Q9NRR1 136 aa14.81□□□□□ -0.04
CPSF7-208ENST00000450000 PHLDA3Q9Y5J5 127 aa14.81□□□□□ -0.04
CPSF7-208ENST00000450000 IBA57-AS1B1ANH7 110 aa14.8□□□□□ -0.04
CPSF7-208ENST00000450000 SMLR1H3BR10 107 aa14.8□□□□□ -0.04
CPSF7-208ENST00000450000 SH2D1AO60880 128 aa14.8□□□□□ -0.04
CPSF7-208ENST00000450000 TPT1P13693 172 aaKnown RBP14.8□□□□□ -0.04
CPSF7-208ENST00000450000 ZC2HC1AQ96GY0 325 aa14.8□□□□□ -0.04
CPSF7-208ENST00000450000 HSPG2P98160 4391 aa14.8□□□□□ -0.04
CPSF7-208ENST00000450000 GRIFINA4D1Z8 144 aa14.79□□□□□ -0.04
CPSF7-208ENST00000450000 RHODO00212 210 aa14.79□□□□□ -0.04
CPSF7-208ENST00000450000 ARMS2P0C7Q2 107 aa14.79□□□□□ -0.04
CPSF7-208ENST00000450000 FHITP49789 147 aa14.79□□□□□ -0.04
CPSF7-208ENST00000450000 TMSB15BA0A087X1C1 80 aa14.78□□□□□ -0.04
CPSF7-208ENST00000450000 KANTRA0A1W2PQU2 76 aa14.78□□□□□ -0.04
CPSF7-208ENST00000450000 KRBOX1C9JBD0 128 aa14.78□□□□□ -0.04
CPSF7-208ENST00000450000 G3V3Q6 166 aa14.78□□□□□ -0.04
CPSF7-208ENST00000450000 PFDN1O60925 122 aa14.78□□□□□ -0.04
CPSF7-208ENST00000450000 FAM74A4Q5TZK3 123 aa14.78□□□□□ -0.04
CPSF7-208ENST00000450000 FAM213BQ8TBF2 198 aa14.78□□□□□ -0.04
CPSF7-208ENST00000450000 SFT2D1Q8WV19 159 aa14.78□□□□□ -0.04
CPSF7-208ENST00000450000 UMAD1C9J7I0 102 aa14.77□□□□□ -0.05
CPSF7-208ENST00000450000 GCSHP23434 173 aa14.77□□□□□ -0.05
CPSF7-208ENST00000450000 DMRTA1Q5VZB9 504 aa14.77□□□□□ -0.05
CPSF7-208ENST00000450000 KCNRGQ8N5I3 272 aa14.77□□□□□ -0.05
CPSF7-208ENST00000450000 TM2D2Q9BX73 214 aa14.77□□□□□ -0.05
CPSF7-208ENST00000450000 ZNF471Q9BX82 626 aaPredicted RBP14.77□□□□□ -0.05
CPSF7-208ENST00000450000 A0A087WWC5 75 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 IGLV5-52A0A0A0MRZ9 124 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 A0A1B0GV50 99 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 EPM2AB3EWF7 344 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 M0R381 172 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 PAGE4O60829 102 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 SEC11BP0C7V7 166 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 CRIP1P50238 77 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 EIF5AP63241 154 aaKnown RBP14.76□□□□□ -0.05
CPSF7-208ENST00000450000 ZNF345Q14585 488 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 Q6ZSN1 163 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 JPT2Q9H910 190 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 URGCP-MRPS24S4R325 110 aa14.76□□□□□ -0.05
CPSF7-208ENST00000450000 A0A0D9SG52 128 aa14.75□□□□□ -0.05
CPSF7-208ENST00000450000 TRBV6-1A0A0K0K1D8 114 aa14.75□□□□□ -0.05
CPSF7-208ENST00000450000 S100A9P06702 114 aaKnown RBP14.75□□□□□ -0.05
CPSF7-208ENST00000450000 TOR2AQ5JU69 321 aa14.75□□□□□ -0.05
CPSF7-208ENST00000450000 DNLZQ5SXM8 178 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms