RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 hCG_2014768A0A024R1R8 64 aa10.39□□□□□ -0.75
CHD3-205ENST00000449744 IGKV3D-20A0A0C4DH25 116 aa10.39□□□□□ -0.75
CHD3-205ENST00000449744 TRBV6-4A0A1B0GX49 114 aa10.39□□□□□ -0.75
CHD3-205ENST00000449744 CDK2AP2O75956 126 aa10.39□□□□□ -0.75
CHD3-205ENST00000449744 ASIPP42127 132 aa10.39□□□□□ -0.75
CHD3-205ENST00000449744 ERVFC1-1P60608 527 aa10.39□□□□□ -0.75
CHD3-205ENST00000449744 ZNF345Q14585 488 aa10.39□□□□□ -0.75
CHD3-205ENST00000449744 CST9LP1Q5W188 147 aa10.39□□□□□ -0.75
CHD3-205ENST00000449744 Q6ZRN7 208 aaPredicted RBP10.39□□□□□ -0.75
CHD3-205ENST00000449744 KCNRGQ8N5I3 272 aa10.39□□□□□ -0.75
CHD3-205ENST00000449744 SLC25A29Q8N8R3 303 aa10.39□□□□□ -0.75
CHD3-205ENST00000449744 B4DEV8 164 aa10.38□□□□□ -0.75
CHD3-205ENST00000449744 DNAH10OSP0CZ25 163 aa10.38□□□□□ -0.75
CHD3-205ENST00000449744 MGST1P10620 155 aaKnown RBP10.38□□□□□ -0.75
CHD3-205ENST00000449744 LGALSLQ3ZCW2 172 aaPredicted RBP10.38□□□□□ -0.75
CHD3-205ENST00000449744 Q6ZNX1 250 aa10.38□□□□□ -0.75
CHD3-205ENST00000449744 C10orf126Q8N4M7 172 aa10.38□□□□□ -0.75
CHD3-205ENST00000449744 FMC1Q96HJ9 113 aa10.38□□□□□ -0.75
CHD3-205ENST00000449744 MSRB1Q9NZV6 116 aa10.38□□□□□ -0.75
CHD3-205ENST00000449744 ZFP30Q9Y2G7 519 aa10.38□□□□□ -0.75
CHD3-205ENST00000449744 TRAV8-6A0A0B4J262 113 aa10.37□□□□□ -0.75
CHD3-205ENST00000449744 A8MWV9 139 aa10.37□□□□□ -0.75
CHD3-205ENST00000449744 SEC11BP0C7V7 166 aa10.37□□□□□ -0.75
CHD3-205ENST00000449744 TIRAPP58753 221 aa10.37□□□□□ -0.75
CHD3-205ENST00000449744 KRTAP10-2P60368 255 aa10.37□□□□□ -0.75
CHD3-205ENST00000449744 TCEAL7Q9BRU2 100 aa10.37□□□□□ -0.75
CHD3-205ENST00000449744 IGHV3-38A0A0C4DH36 116 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 A0A0D9SG52 128 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 KANTRA0A1W2PQU2 76 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 HMSDA8MTL9 139 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 CRYGDP07320 174 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 AKR1C3P42330 323 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 FHITP49789 147 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 OR10J3Q5JRS4 329 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 PIK3CD-AS1Q5SR53 167 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 FAM213BQ8TBF2 198 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 ZC2HC1AQ96GY0 325 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 ZNF471Q9BX82 626 aaPredicted RBP10.36□□□□□ -0.75
CHD3-205ENST00000449744 BOLA1Q9Y3E2 137 aa10.36□□□□□ -0.75
CHD3-205ENST00000449744 UMAD1C9J7I0 102 aa10.35□□□□□ -0.75
CHD3-205ENST00000449744 M0R036 132 aa10.35□□□□□ -0.75
CHD3-205ENST00000449744 SH2D1AO60880 128 aa10.35□□□□□ -0.75
CHD3-205ENST00000449744 ZFP2Q6ZN57 461 aa10.35□□□□□ -0.75
CHD3-205ENST00000449744 SYT8Q8NBV8 401 aa10.35□□□□□ -0.75
CHD3-205ENST00000449744 ATP6V0E2Q8NHE4 81 aa10.35□□□□□ -0.75
CHD3-205ENST00000449744 SFT2D1Q8WV19 159 aa10.35□□□□□ -0.75
CHD3-205ENST00000449744 PARLQ9H300 379 aa10.35□□□□□ -0.75
CHD3-205ENST00000449744 IL36BQ9NZH7 164 aa10.35□□□□□ -0.75
CHD3-205ENST00000449744 KRBOX1C9JBD0 128 aa10.34□□□□□ -0.75
CHD3-205ENST00000449744 H3BVH4 76 aa10.34□□□□□ -0.75
CHD3-205ENST00000449744 BCL2L11O43521 198 aa10.34□□□□□ -0.75
CHD3-205ENST00000449744 PAGE4O60829 102 aa10.34□□□□□ -0.75
CHD3-205ENST00000449744 PFDN1O60925 122 aa10.34□□□□□ -0.75
CHD3-205ENST00000449744 CRIP1P50238 77 aa10.34□□□□□ -0.75
CHD3-205ENST00000449744 EIF5AP63241 154 aaKnown RBP10.34□□□□□ -0.75
CHD3-205ENST00000449744 FAM162BQ5T6X4 162 aa10.34□□□□□ -0.75
CHD3-205ENST00000449744 COX8CQ7Z4L0 72 aa10.34□□□□□ -0.75
CHD3-205ENST00000449744 OR11H4Q8NGC9 324 aa10.34□□□□□ -0.75
CHD3-205ENST00000449744 KRTAP4-5Q9BYR2 181 aa10.34□□□□□ -0.75
CHD3-205ENST00000449744 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
CHD3-205ENST00000449744 TRBV6-1A0A0K0K1D8 114 aa10.33□□□□□ -0.76
CHD3-205ENST00000449744 A0A1B0GV50 99 aa10.33□□□□□ -0.76
CHD3-205ENST00000449744 A0A1B0GVG6 124 aa10.33□□□□□ -0.76
CHD3-205ENST00000449744 GRIFINA4D1Z8 144 aa10.33□□□□□ -0.76
CHD3-205ENST00000449744 ARMS2P0C7Q2 107 aa10.33□□□□□ -0.76
CHD3-205ENST00000449744 LELP1Q5T871 98 aa10.33□□□□□ -0.76
CHD3-205ENST00000449744 MAPKAPK5-AS1Q8N8E1 139 aa10.33□□□□□ -0.76
CHD3-205ENST00000449744 MBD3L1Q8WWY6 194 aa10.33□□□□□ -0.76
CHD3-205ENST00000449744 GTSF1LQ9H1H1 148 aa10.33□□□□□ -0.76
CHD3-205ENST00000449744 A0A087WTM6 91 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 TMSB15BA0A087X1C1 80 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 GAGE12JA6NER3 117 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 LTAP01374 205 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 TPT1P13693 172 aaKnown RBP10.32□□□□□ -0.76
CHD3-205ENST00000449744 GAGE1Q13065 139 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 GAGE4Q13068 117 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 GAGE5Q13069 117 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 ZNF674Q2M3X9 581 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 GAGE13Q4V321 117 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 LINC01556Q5JQF7 62 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 DNLZQ5SXM8 178 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 DMRTA1Q5VZB9 504 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 PHLDA3Q9Y5J5 127 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 ABCA13Q86UQ4 5058 aa10.32□□□□□ -0.76
CHD3-205ENST00000449744 RHODO00212 210 aa10.31□□□□□ -0.76
CHD3-205ENST00000449744 PSCAO43653 123 aa10.31□□□□□ -0.76
CHD3-205ENST00000449744 S100A9P06702 114 aaKnown RBP10.31□□□□□ -0.76
CHD3-205ENST00000449744 H2AFB1P0C5Y9 115 aa10.31□□□□□ -0.76
CHD3-205ENST00000449744 CDPF1Q6NVV7 123 aa10.31□□□□□ -0.76
CHD3-205ENST00000449744 JPT2Q9H910 190 aa10.31□□□□□ -0.76
CHD3-205ENST00000449744 LRP1BQ9NZR2 4599 aa10.31□□□□□ -0.76
CHD3-205ENST00000449744 M0R381 172 aa10.3□□□□□ -0.76
CHD3-205ENST00000449744 IGHV3-30P01768 117 aa10.3□□□□□ -0.76
CHD3-205ENST00000449744 IGHV3-33P01772 117 aa10.3□□□□□ -0.76
CHD3-205ENST00000449744 IGHV3-30-3P0DP02 117 aa10.3□□□□□ -0.76
CHD3-205ENST00000449744 IGHV3-30-5P0DP03 117 aa10.3□□□□□ -0.76
CHD3-205ENST00000449744 LINC01559Q495D7 138 aa10.3□□□□□ -0.76
CHD3-205ENST00000449744 FAM74A4Q5TZK3 123 aa10.3□□□□□ -0.76
CHD3-205ENST00000449744 Q6ZSN1 163 aa10.3□□□□□ -0.76
CHD3-205ENST00000449744 SAMD10Q9BYL1 202 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms