RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 FBN3Q75N90 2809 aa7.43□□□□□ -1.22
CCDC171-203ENST00000449575 IGHV3-66A0A0C4DH42 116 aa7.43□□□□□ -1.22
CCDC171-203ENST00000449575 GAGE12HA6NDE8 117 aa7.43□□□□□ -1.22
CCDC171-203ENST00000449575 CSN1S1P47710 185 aa7.43□□□□□ -1.22
CCDC171-203ENST00000449575 THAP8Q8NA92 274 aa7.43□□□□□ -1.22
CCDC171-203ENST00000449575 ZNF503Q96F45 646 aa7.43□□□□□ -1.22
CCDC171-203ENST00000449575 GFRA4Q9GZZ7 299 aa7.43□□□□□ -1.22
CCDC171-203ENST00000449575 PEX7O00628 323 aa7.42□□□□□ -1.22
CCDC171-203ENST00000449575 CHEK1O14757 476 aa7.42□□□□□ -1.22
CCDC171-203ENST00000449575 PSMG4Q5JS54 123 aa7.42□□□□□ -1.22
CCDC171-203ENST00000449575 RABAC1Q9UI14 185 aa7.42□□□□□ -1.22
CCDC171-203ENST00000449575 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
CCDC171-203ENST00000449575 UBE2L3P68036 154 aaKnown RBP7.42□□□□□ -1.22
CCDC171-203ENST00000449575 SPATA25Q9BR10 227 aa7.42□□□□□ -1.22
CCDC171-203ENST00000449575 RPP21Q9H633 154 aaKnown RBP7.42□□□□□ -1.22
CCDC171-203ENST00000449575 TEX48A0A1B0GUV7 120 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 IL4P05112 153 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 SMIM13P0DJ93 91 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 FGF6P10767 208 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 FOXI2Q6ZQN5 318 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 ZC2HC1AQ96GY0 325 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 DAZ1Q9NQZ3 744 aaKnown RBP7.41□□□□□ -1.22
CCDC171-203ENST00000449575 PEMTQ9UBM1 199 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 TNFRSF18Q9Y5U5 241 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 F8WDY8 70 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 K7EQM0 130 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 IGLV1-51P01701 117 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 BEAN1Q3B7T3 259 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 C9orf66Q5T8R8 295 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 MRAP2Q96G30 205 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 TRGV9Q99603 122 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 GEMIN7Q9H840 131 aaKnown RBP7.41□□□□□ -1.22
CCDC171-203ENST00000449575 SIGLEC8Q9NYZ4 499 aa7.41□□□□□ -1.22
CCDC171-203ENST00000449575 PRKDCP78527 4128 aaKnown RBP7.4□□□□□ -1.22
CCDC171-203ENST00000449575 F8W1H4 67 aa7.4□□□□□ -1.22
CCDC171-203ENST00000449575 RBPMS2Q6ZRY4 209 aaKnown RBP7.4□□□□□ -1.22
CCDC171-203ENST00000449575 UFC1Q9Y3C8 167 aa7.4□□□□□ -1.22
CCDC171-203ENST00000449575 WI2-2373I1.2A0A1W2PRP0 233 aa7.4□□□□□ -1.23
CCDC171-203ENST00000449575 WIPF1O43516 503 aa7.4□□□□□ -1.23
CCDC171-203ENST00000449575 LYZP61626 148 aa7.4□□□□□ -1.23
CCDC171-203ENST00000449575 HERV-K104P63124 156 aa7.4□□□□□ -1.23
CCDC171-203ENST00000449575 DEFB114Q30KQ6 69 aa7.4□□□□□ -1.23
CCDC171-203ENST00000449575 RAB37Q96AX2 223 aa7.4□□□□□ -1.23
CCDC171-203ENST00000449575 MCRIP2Q9BUT9 160 aaKnown RBP7.4□□□□□ -1.23
CCDC171-203ENST00000449575 AP5S1Q9NUS5 200 aa7.4□□□□□ -1.23
CCDC171-203ENST00000449575 ZNF492Q9P255 531 aa7.4□□□□□ -1.23
CCDC171-203ENST00000449575 TRAV25A0A0B4J276 109 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 IGHV7-4-1A0A0J9YVY3 117 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 SNAI2O43623 268 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 LGALS9BQ3B8N2 356 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 LGALS9CQ6DKI2 356 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 TMEM61Q8N0U2 210 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 BLNKQ8WV28 456 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 RHPN1-AS1Q9BWJ2 59 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 AGRNO00468 2067 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 K7EMT4 169 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 P01737 135 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 EGFEM1PQ0D2K5 195 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 OR1L4Q8NGR5 311 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 GPR82Q96P67 336 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 PRR25Q96S07 402 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 VGLL1Q99990 258 aa7.39□□□□□ -1.23
CCDC171-203ENST00000449575 IGKV3-7A0A075B6H7 116 aa7.38□□□□□ -1.23
CCDC171-203ENST00000449575 ORM2P19652 201 aa7.38□□□□□ -1.23
CCDC171-203ENST00000449575 CRYBA4P53673 196 aa7.38□□□□□ -1.23
CCDC171-203ENST00000449575 PAXXQ9BUH6 204 aa7.38□□□□□ -1.23
CCDC171-203ENST00000449575 SLC25A2Q9BXI2 301 aa7.38□□□□□ -1.23
CCDC171-203ENST00000449575 KPRPQ5T749 579 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-203ENST00000449575 PATE2Q6UY27 113 aa7.38□□□□□ -1.23
CCDC171-203ENST00000449575 DYNLRB2Q8TF09 96 aa7.38□□□□□ -1.23
CCDC171-203ENST00000449575 PGLYRP4Q96LB8 373 aa7.38□□□□□ -1.23
CCDC171-203ENST00000449575 LINC00479Q96M42 142 aa7.38□□□□□ -1.23
CCDC171-203ENST00000449575 C1orf43Q9BWL3 253 aa7.38□□□□□ -1.23
CCDC171-203ENST00000449575 TRAV26-1A0A087WT03 109 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 ZNF785A8K8V0 405 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 CT45A10P0DMU9 189 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 INSL3P51460 131 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 FAM167A-AS1Q96KT0 104 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 ASCL2Q99929 193 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 FAM110AQ9BQ89 295 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 NAA38Q9BRA0 125 aaKnown RBP7.37□□□□□ -1.23
CCDC171-203ENST00000449575 KLF12Q9Y4X4 402 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 U3KQE9 123 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 MORN5Q5VZ52 161 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 PRSS3P2Q8NHM4 247 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 METTL26Q96S19 204 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 COL7A1Q02388 2944 aa7.37□□□□□ -1.23
CCDC171-203ENST00000449575 BUB3O43684 328 aa7.36□□□□□ -1.23
CCDC171-203ENST00000449575 COX7A2P2O60397 106 aa7.36□□□□□ -1.23
CCDC171-203ENST00000449575 FMC1Q96HJ9 113 aa7.36□□□□□ -1.23
CCDC171-203ENST00000449575 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
CCDC171-203ENST00000449575 MRPL16Q9NX20 251 aaKnown RBP7.36□□□□□ -1.23
CCDC171-203ENST00000449575 HIGD1BQ9P298 99 aa7.36□□□□□ -1.23
CCDC171-203ENST00000449575 EPDR1Q9UM22 224 aa7.36□□□□□ -1.23
CCDC171-203ENST00000449575 TIMM8BQ9Y5J9 83 aaPredicted RBP7.36□□□□□ -1.23
CCDC171-203ENST00000449575 C19orf71A6NCJ1 209 aa7.35□□□□□ -1.23
CCDC171-203ENST00000449575 RIGQ13278 110 aa7.35□□□□□ -1.23
CCDC171-203ENST00000449575 C10orf113Q5VZT2 155 aa7.35□□□□□ -1.23
CCDC171-203ENST00000449575 GTSF1Q8WW33 167 aa7.35□□□□□ -1.23
CCDC171-203ENST00000449575 MLST8Q9BVC4 326 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms