RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	CRIP3	Q6Q6R5	217 aa		6.29	□□□□□ -1.4
HCG18-238	ENST00000449544	GNRH2	O43555	120 aa		6.29	□□□□□ -1.4
HCG18-238	ENST00000449544	CRYGD	P07320	174 aa		6.29	□□□□□ -1.4
HCG18-238	ENST00000449544	CKS1B	P61024	79 aa		6.29	□□□□□ -1.4
HCG18-238	ENST00000449544	PNRC1	Q12796	327 aa	Predicted RBP	6.29	□□□□□ -1.4
HCG18-238	ENST00000449544	ZNF492	Q9P255	531 aa		6.29	□□□□□ -1.4
HCG18-238	ENST00000449544	OR5AL1	P0C617	328 aa		6.29	□□□□□ -1.4
HCG18-238	ENST00000449544	MEIG1	Q5JSS6	88 aa		6.29	□□□□□ -1.4
HCG18-238	ENST00000449544	CLRN3	Q8NCR9	226 aa		6.29	□□□□□ -1.4
HCG18-238	ENST00000449544	SDHC	Q99643	169 aa	Predicted RBP	6.29	□□□□□ -1.4
HCG18-238	ENST00000449544	TP53TG1	Q9Y2A0	90 aa		6.29	□□□□□ -1.4
HCG18-238	ENST00000449544	IGLV2-14	P01704	120 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	BEAN1	Q3B7T3	259 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544		Q6ZPA2	131 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544		Q6ZTI0	123 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	DERL1	Q9BUN8	251 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	RNF126	Q9BV68	326 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	PARL	Q9H300	379 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	PKIG	Q9Y2B9	76 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	ZNF253	O75346	499 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	HERVK_113	P61574	105 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	COX19	Q49B96	90 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	AMTN	Q6UX39	209 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	DMRT1	Q9Y5R6	373 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	COX11	Q9Y6N1	276 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	TRAV13-1	A0A0B4J241	112 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	VCX2	Q9H322	139 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	C11orf68	Q9H3H3	251 aa	Known RBP	6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	KLK12	Q9UKR0	248 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	LOC105371267	A0A1B0GV96	52 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	HINT1	P49773	126 aa	Predicted RBP	6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	CCL20	P78556	96 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544		Q8N1Y9	231 aa		6.28	□□□□□ -1.4
HCG18-238	ENST00000449544	CRYBG3	Q68DQ2	2970 aa		6.27	□□□□□ -1.4
HCG18-238	ENST00000449544	IGHV4-4	A0A075B6R2	117 aa		6.27	□□□□□ -1.41
HCG18-238	ENST00000449544	C14orf177	Q52M58	125 aa		6.27	□□□□□ -1.41
HCG18-238	ENST00000449544	UTP20	O75691	2785 aa	Known RBP	6.27	□□□□□ -1.41
HCG18-238	ENST00000449544	TMEM250	H0YL14	139 aa		6.27	□□□□□ -1.41
HCG18-238	ENST00000449544	FABP4	P15090	132 aa		6.27	□□□□□ -1.41
HCG18-238	ENST00000449544	ANAPC16	Q96DE5	110 aa		6.27	□□□□□ -1.41
HCG18-238	ENST00000449544	TRAPPC1	Q9Y5R8	145 aa		6.27	□□□□□ -1.41
HCG18-238	ENST00000449544	SLC17A3	O00476	420 aa		6.27	□□□□□ -1.41
HCG18-238	ENST00000449544	TMEM136	Q6ZRR5	245 aa		6.27	□□□□□ -1.41
HCG18-238	ENST00000449544	ATP5L	O75964	103 aa		6.26	□□□□□ -1.41
HCG18-238	ENST00000449544	LINC00479	Q96M42	142 aa		6.26	□□□□□ -1.41
HCG18-238	ENST00000449544	ZFAND3	Q9H8U3	227 aa		6.26	□□□□□ -1.41
HCG18-238	ENST00000449544	SPTBN5	Q9NRC6	3674 aa	Known RBP	6.26	□□□□□ -1.41
HCG18-238	ENST00000449544	PRAC2	D3DTV9	90 aa		6.26	□□□□□ -1.41
HCG18-238	ENST00000449544	BRWD1-AS2	P59051	145 aa		6.26	□□□□□ -1.41
HCG18-238	ENST00000449544	COL27A1	Q8IZC6	1860 aa	Predicted RBP	6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	C1orf196	B1AJZ1	125 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	EDN2	P20800	178 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	BTC	P35070	178 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544		Q86TA4	180 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	TRPT1	Q86TN4	253 aa	Known RBP	6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	FAM74A7	A6NL05	159 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	IFITM10	A6NMD0	228 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544		H3BRM9	83 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	KRTAP10-3	P60369	221 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	C6orf226	Q5I0X4	101 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	SLC25A2	Q9BXI2	301 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	TRAV8-3	A0A0A6YYJ7	113 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	UBE2B	P63146	152 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	HBB	P68871	147 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	VSIG2	Q96IQ7	327 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	PRELID3A	Q96N28	172 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	IGLV10-54	A0A075B6I4	117 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	IGHV1-24	A0A0C4DH33	117 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	HIGD1C	A8MV81	97 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	TCTA	P57738	103 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	PLP1	P60201	277 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	PRR20E	P86478	221 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	PRR20C	P86479	221 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	PRR20D	P86480	221 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	PRR20B	P86481	221 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	PRR20A	P86496	221 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	LYZL1	Q6UWQ5	148 aa		6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	RNASE7	Q9H1E1	156 aa	Known RBP	6.25	□□□□□ -1.41
HCG18-238	ENST00000449544	NXPH4	O95158	308 aa		6.24	□□□□□ -1.41
HCG18-238	ENST00000449544	WFDC1	Q9HC57	220 aa		6.24	□□□□□ -1.41
HCG18-238	ENST00000449544	KLF12	Q9Y4X4	402 aa		6.24	□□□□□ -1.41
HCG18-238	ENST00000449544	CIDEA	O60543	219 aa		6.24	□□□□□ -1.41
HCG18-238	ENST00000449544	TMEM75	Q8N9X5	138 aa		6.24	□□□□□ -1.41
HCG18-238	ENST00000449544	C7orf77	A4D0Y5	90 aa		6.24	□□□□□ -1.41
HCG18-238	ENST00000449544	RBAKDN	A6NC62	111 aa		6.24	□□□□□ -1.41
HCG18-238	ENST00000449544	VCY	O14598	125 aa		6.24	□□□□□ -1.41
HCG18-238	ENST00000449544	KRTAP10-11	P60412	298 aa		6.24	□□□□□ -1.41
HCG18-238	ENST00000449544	RASL11A	Q6T310	242 aa		6.24	□□□□□ -1.41
HCG18-238	ENST00000449544	hDV102S1	A0JD36	115 aa		6.23	□□□□□ -1.41
HCG18-238	ENST00000449544		K7EQD1	137 aa		6.23	□□□□□ -1.41
HCG18-238	ENST00000449544	FXYD5	Q96DB9	178 aa		6.23	□□□□□ -1.41
HCG18-238	ENST00000449544	RBMY1B	A6NDE4	496 aa	Known RBP	6.23	□□□□□ -1.41
HCG18-238	ENST00000449544	RBMY1E	A6NEQ0	496 aa	Known RBP	6.23	□□□□□ -1.41
HCG18-238	ENST00000449544	RBMY1D	P0C7P1	496 aa	Known RBP	6.23	□□□□□ -1.41
HCG18-238	ENST00000449544	GDF5OS	Q5U4N7	250 aa		6.23	□□□□□ -1.41
HCG18-238	ENST00000449544	LSM4	Q9Y4Z0	139 aa	Known RBP	6.23	□□□□□ -1.41
HCG18-238	ENST00000449544		A0A1B0GW15	77 aa		6.23	□□□□□ -1.41
HCG18-238	ENST00000449544	FOXA3	P55318	350 aa	Predicted RBP	6.23	□□□□□ -1.41

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