RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 GNG5P63218 68 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 SPCS1Q9Y6A9 102 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 BCL2L11O43521 198 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 SERTAD4-AS1Q5TG53 156 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 A0A087WZ39 114 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 TRAV8-3A0A0A6YYJ7 113 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 OR4D5Q8NGN0 318 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 VAX2Q9UIW0 290 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 NMSQ5H8A3 153 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 DYNAPQ8N1N2 210 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 C9orf85Q96MD7 179 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGKV1-5P01602 117 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 SMIM13P0DJ93 91 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 MARVELD1Q9BSK0 173 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 PRIMA1Q86XR5 153 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 LAMTOR3Q9UHA4 124 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 A0A087WWC5 75 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 NPCDR1Q9BY65 106 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 WT1-ASQ06250 92 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 KIAA1644Q3SXP7 199 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 CEMP1Q6PRD7 247 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 WI2-2373I1.2A0A1W2PRP0 233 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 GRIFINA4D1Z8 144 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 ARL14EPLP0DKL9 152 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 SUMO4Q6EEV6 95 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 LAMTOR2Q9Y2Q5 125 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGKV1-6A0A0C4DH72 117 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 SEC61GP60059 68 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 ORAOV1Q8WV07 137 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 DNAH12Q6ZR08 3092 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 NBEAL1Q6ZS30 2694 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 GCHFRP30047 84 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 DEFB114Q30KQ6 69 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 PGLYRP4Q96LB8 373 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 FGF23Q9GZV9 251 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 FNDC4Q9H6D8 234 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 UQCR10Q9UDW1 63 aa4.32□□□□□ -1.72
CDC42BPA-209ENST00000448940 MUC21A0A0G2JKD1 596 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 MUC21A0A140T8X8 626 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 LINC00158P58513 81 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 SHANK2-AS3Q9BTD1 123 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 TRBV20OR9-2A0A075B6H5 130 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 AMTNQ6UX39 209 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 PYGO2Q9BRQ0 406 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 TMEM243Q9BU79 118 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGSF10Q6WRI0 2623 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 SMIM9A6NGZ8 99 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 MEF2BQ02080 365 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGHV1OR15-1A0A075B7D0 117 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 TRBV9A0A0B4J1U6 114 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 CRYBB3P26998 211 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 GSN-AS1Q9NRJ2 163 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 TRAV9-1A0A075B6T8 112 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 KIR2DL5BA0A0G2JN68 375 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 KIR2DL5BA0A0G2JPC4 375 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 Q0VG73 95 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 EBI3Q14213 229 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 KPRPQ5T749 579 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 KIR2DL5AQ8N109 375 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 RNF152Q8N8N0 203 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 OR10G8Q8NGN5 311 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 KIR2DL5BQ8NHK3 375 aa4.31□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGLV10-54A0A075B6I4 117 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 TRAV23DV6A0A075B6W5 121 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 DDTP30046 118 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 C1orf195Q5TG92 126 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGFL4Q6B9Z1 124 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 C10orf99Q6UWK7 81 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 MIR17HGQ75NE6 70 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 PRUNE2Q8WUY3 3088 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGLV11-55A0A075B6I3 123 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 LGALS9O00182 355 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 CXCL2P19875 107 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 PDE6HQ13956 83 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 PUSL1Q8N0Z8 303 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 DEFB104AQ8WTQ1 72 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 ST20Q9HBF5 79 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 PSG8Q9UQ74 426 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 WDR83OSQ9Y284 106 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 TRAV13-1A0A0B4J241 112 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 EPM2AB3EWF7 344 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 DIRC3C9JPN6 131 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 PEX7O00628 323 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 KLF5Q13887 457 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 FAM236DA0A1B0GTK5 79 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 FAM236CP0DP71 79 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGHV4-4A0A075B6R2 117 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGKV2-40A0A087WW87 121 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 TRBV7-9A0A0J9YWB2 115 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGLC7A0M8Q6 106 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 LYRM9A8MSI8 78 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 J3KT08 172 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 IGKV2D-40P01614 121 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 PYYP10082 97 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 IFI27P40305 119 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 QRFPP83859 136 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 AGMATQ9BSE5 352 aa4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 RTBDNQ9BSG5 229 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-209ENST00000448940 DMRT1Q9Y5R6 373 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms