RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ISOC2Q96AB3 205 aa9.7□□□□□ -0.86
PDLIM2-213ENST00000448520 NUDT11Q96G61 164 aa9.7□□□□□ -0.86
PDLIM2-213ENST00000448520 PYGO2Q9BRQ0 406 aa9.7□□□□□ -0.86
PDLIM2-213ENST00000448520 IGLV2-18A0A075B6J9 118 aa9.69□□□□□ -0.86
PDLIM2-213ENST00000448520 CBY3A6NI87 242 aa9.69□□□□□ -0.86
PDLIM2-213ENST00000448520 KRBOX1C9JBD0 128 aa9.69□□□□□ -0.86
PDLIM2-213ENST00000448520 ATP6V1G1O75348 118 aa9.69□□□□□ -0.86
PDLIM2-213ENST00000448520 GZMBP10144 247 aa9.69□□□□□ -0.86
PDLIM2-213ENST00000448520 HTN3P15516 51 aa9.69□□□□□ -0.86
PDLIM2-213ENST00000448520 DAD1P61803 113 aa9.69□□□□□ -0.86
PDLIM2-213ENST00000448520 FAM159AQ6UWV7 190 aa9.69□□□□□ -0.86
PDLIM2-213ENST00000448520 ZNF575Q86XF7 245 aa9.69□□□□□ -0.86
PDLIM2-213ENST00000448520 C15orf53Q8NAA6 179 aa9.69□□□□□ -0.86
PDLIM2-213ENST00000448520 NACAE9PAV3 2078 aa9.68□□□□□ -0.86
PDLIM2-213ENST00000448520 B4DEV8 164 aa9.68□□□□□ -0.86
PDLIM2-213ENST00000448520 LINC01559Q495D7 138 aa9.68□□□□□ -0.86
PDLIM2-213ENST00000448520 C1orf134Q5TEV5 83 aa9.68□□□□□ -0.86
PDLIM2-213ENST00000448520 OR2D3Q8NGH3 330 aa9.68□□□□□ -0.86
PDLIM2-213ENST00000448520 DAZAP1Q96EP5 407 aaKnown RBP9.68□□□□□ -0.86
PDLIM2-213ENST00000448520 SEC11CQ9BY50 192 aa9.68□□□□□ -0.86
PDLIM2-213ENST00000448520 MDFICQ9P1T7 246 aa9.68□□□□□ -0.86
PDLIM2-213ENST00000448520 IGHV3-16A0A0C4DH30 117 aa9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 PLAC8L1A1L4L8 177 aa9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 LYRM9A8MSI8 78 aa9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 P01737 135 aa9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 ERVFC1-1P60608 527 aa9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 C10orf91Q5T1B1 145 aa9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 IBA57Q5T440 356 aaKnown RBP9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 TMEM88Q6PEY1 159 aa9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 C11orf72Q8NBR9 251 aa9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 RNASE8Q8TDE3 154 aaKnown RBP9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 LINC00467Q9BRT7 94 aa9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 GSN-AS1Q9NRJ2 163 aa9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 CARHSP1Q9Y2V2 147 aaKnown RBP9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 TIMM8BQ9Y5J9 83 aaPredicted RBP9.67□□□□□ -0.86
PDLIM2-213ENST00000448520 PCLOQ9Y6V0 5065 aa9.66□□□□□ -0.86
PDLIM2-213ENST00000448520 GATCO43716 136 aaKnown RBP9.66□□□□□ -0.86
PDLIM2-213ENST00000448520 TDRG1Q3Y452 100 aa9.66□□□□□ -0.86
PDLIM2-213ENST00000448520 RPP21Q9H633 154 aaKnown RBP9.66□□□□□ -0.86
PDLIM2-213ENST00000448520 BIN3Q9NQY0 253 aa9.66□□□□□ -0.86
PDLIM2-213ENST00000448520 H3BVH4 76 aa9.65□□□□□ -0.86
PDLIM2-213ENST00000448520 RNASE3P12724 160 aaKnown RBP9.65□□□□□ -0.86
PDLIM2-213ENST00000448520 FAM231DQ6ZW35 169 aa9.65□□□□□ -0.86
PDLIM2-213ENST00000448520 OR10G8Q8NGN5 311 aa9.65□□□□□ -0.86
PDLIM2-213ENST00000448520 TMEM263Q8WUH6 116 aaKnown RBP9.65□□□□□ -0.86
PDLIM2-213ENST00000448520 SFRP2Q96HF1 295 aa9.65□□□□□ -0.86
PDLIM2-213ENST00000448520 OSTCQ9NRP0 149 aa9.65□□□□□ -0.86
PDLIM2-213ENST00000448520 V9GYV3 84 aa9.65□□□□□ -0.86
PDLIM2-213ENST00000448520 TRGV11A0A075B6L2 103 aa9.64□□□□□ -0.87
PDLIM2-213ENST00000448520 MUC21A0A0G2JKD1 596 aa9.64□□□□□ -0.87
PDLIM2-213ENST00000448520 MUC21A0A140T8X8 626 aa9.64□□□□□ -0.87
PDLIM2-213ENST00000448520 APOC3P02656 99 aa9.64□□□□□ -0.87
PDLIM2-213ENST00000448520 C16orf74Q96GX8 76 aa9.64□□□□□ -0.87
PDLIM2-213ENST00000448520 KCNS1Q96KK3 526 aa9.64□□□□□ -0.87
PDLIM2-213ENST00000448520 DNAH11Q96DT5 4516 aa9.64□□□□□ -0.87
PDLIM2-213ENST00000448520 DYNC1H1Q14204 4646 aaKnown RBP9.63□□□□□ -0.87
PDLIM2-213ENST00000448520 PKD1P98161 4303 aa9.63□□□□□ -0.87
PDLIM2-213ENST00000448520 ASIPP42127 132 aa9.63□□□□□ -0.87
PDLIM2-213ENST00000448520 TCL1AP56279 114 aa9.63□□□□□ -0.87
PDLIM2-213ENST00000448520 ZNF415Q09FC8 603 aa9.63□□□□□ -0.87
PDLIM2-213ENST00000448520 PNRC1Q12796 327 aaPredicted RBP9.63□□□□□ -0.87
PDLIM2-213ENST00000448520 C9orf85Q96MD7 179 aa9.63□□□□□ -0.87
PDLIM2-213ENST00000448520 NOP10Q9NPE3 64 aaKnown RBP9.63□□□□□ -0.87
PDLIM2-213ENST00000448520 MRPL16Q9NX20 251 aaKnown RBP9.63□□□□□ -0.87
PDLIM2-213ENST00000448520 RYR1P21817 5038 aa9.62□□□□□ -0.87
PDLIM2-213ENST00000448520 ARMS2P0C7Q2 107 aa9.62□□□□□ -0.87
PDLIM2-213ENST00000448520 S100A1P23297 94 aa9.62□□□□□ -0.87
PDLIM2-213ENST00000448520 S100A4P26447 101 aaKnown RBP9.62□□□□□ -0.87
PDLIM2-213ENST00000448520 SSTP61278 116 aa9.62□□□□□ -0.87
PDLIM2-213ENST00000448520 ZNF493Q6ZR52 646 aa9.62□□□□□ -0.87
PDLIM2-213ENST00000448520 C15orf54Q8N8G6 183 aa9.62□□□□□ -0.87
PDLIM2-213ENST00000448520 CLRN3Q8NCR9 226 aa9.62□□□□□ -0.87
PDLIM2-213ENST00000448520 GTSF1Q8WW33 167 aa9.62□□□□□ -0.87
PDLIM2-213ENST00000448520 SNURFLB1AK76 121 aa9.61□□□□□ -0.87
PDLIM2-213ENST00000448520 F5H768 121 aa9.61□□□□□ -0.87
PDLIM2-213ENST00000448520 IGLC6P0CF74 106 aa9.61□□□□□ -0.87
PDLIM2-213ENST00000448520 DEFB130BP0DP73 79 aa9.61□□□□□ -0.87
PDLIM2-213ENST00000448520 DEFB130AP0DP74 79 aa9.61□□□□□ -0.87
PDLIM2-213ENST00000448520 CCL18P55774 89 aa9.61□□□□□ -0.87
PDLIM2-213ENST00000448520 RPS20P60866 119 aaKnown RBP9.61□□□□□ -0.87
PDLIM2-213ENST00000448520 ATRAIDQ6UW56 229 aa9.61□□□□□ -0.87
PDLIM2-213ENST00000448520 TPPP3Q9BW30 176 aa9.61□□□□□ -0.87
PDLIM2-213ENST00000448520 C7orf77A4D0Y5 90 aa9.6□□□□□ -0.87
PDLIM2-213ENST00000448520 ATP5G1P05496 136 aa9.6□□□□□ -0.87
PDLIM2-213ENST00000448520 DNLZQ5SXM8 178 aa9.6□□□□□ -0.87
PDLIM2-213ENST00000448520 Q6ZTI0 123 aa9.6□□□□□ -0.87
PDLIM2-213ENST00000448520 FER1L6-AS1Q8NA97 138 aa9.6□□□□□ -0.87
PDLIM2-213ENST00000448520 OR10AG1Q8NH19 301 aa9.6□□□□□ -0.87
PDLIM2-213ENST00000448520 TRGV1A0A0A0MS02 117 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 NBDYA0A0U1RRE5 68 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 GAGE12BA1L429 117 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 GAGE7O76087 117 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 NUDT3O95989 172 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 MT-ND4LP03901 98 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 CXCL1P09341 107 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 GAGE12FP0CL80 117 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 GAGE12GP0CL81 117 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 GAGE12IP0CL82 117 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 CT83Q5H943 113 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 LYZL1Q6UWQ5 148 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 383 ms