RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 C9orf139Q6ZV77 190 aa9.81□□□□□ -0.84
SHC1-210ENST00000448116 LINC01546A6NGU7 62 aa9.81□□□□□ -0.84
SHC1-210ENST00000448116 GNRH2O43555 120 aa9.81□□□□□ -0.84
SHC1-210ENST00000448116 SMIM2Q9BVW6 85 aa9.81□□□□□ -0.84
SHC1-210ENST00000448116 NPFFR1Q9GZQ6 430 aa9.81□□□□□ -0.84
SHC1-210ENST00000448116 MRPL53Q96EL3 112 aaKnown RBP9.81□□□□□ -0.84
SHC1-210ENST00000448116 HIST1H4GQ99525 98 aa9.81□□□□□ -0.84
SHC1-210ENST00000448116 U3KQE9 123 aa9.81□□□□□ -0.84
SHC1-210ENST00000448116 AGRNO00468 2067 aa9.81□□□□□ -0.84
SHC1-210ENST00000448116 A0A087WX48 190 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 C19orf84I3L1E1 186 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 NEGR1Q7Z3B1 354 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 VPREB3Q9UKI3 123 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 COL12A1Q99715 3063 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 DOPEY2Q9Y3R5 2298 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 OR11H12B2RN74 326 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 ASIPP42127 132 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 C3orf56Q8N813 242 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 OR11H1Q8NG94 326 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 OR11H2Q8NH07 326 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 TRAV21A0A0B4J279 112 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 SUMO2P61956 95 aaKnown RBP9.8□□□□□ -0.84
SHC1-210ENST00000448116 CEND1Q8N111 149 aa9.8□□□□□ -0.84
SHC1-210ENST00000448116 ZFAND2AQ8N6M9 145 aa9.79□□□□□ -0.84
SHC1-210ENST00000448116 LINC00477Q96M19 166 aa9.79□□□□□ -0.84
SHC1-210ENST00000448116 HIGD1BQ9P298 99 aa9.79□□□□□ -0.84
SHC1-210ENST00000448116 GAGE5Q13069 117 aa9.79□□□□□ -0.84
SHC1-210ENST00000448116 GAGE6Q13070 117 aa9.79□□□□□ -0.84
SHC1-210ENST00000448116 PSMG4Q5JS54 123 aa9.79□□□□□ -0.84
SHC1-210ENST00000448116 FAM223BA6NKX1 122 aa9.79□□□□□ -0.84
SHC1-210ENST00000448116 FAM223AQ8IWN6 122 aa9.79□□□□□ -0.84
SHC1-210ENST00000448116 OR5A1Q8NGJ0 315 aa9.79□□□□□ -0.84
SHC1-210ENST00000448116 PIFOQ8TCI5 191 aa9.79□□□□□ -0.84
SHC1-210ENST00000448116 SORL1Q92673 2214 aa9.79□□□□□ -0.84
SHC1-210ENST00000448116 IGHV1-69DA0A0B4J2H0 117 aa9.78□□□□□ -0.84
SHC1-210ENST00000448116 H3BUX3 64 aa9.78□□□□□ -0.84
SHC1-210ENST00000448116 IGHV1-69P01742 117 aa9.78□□□□□ -0.84
SHC1-210ENST00000448116 BLCAPP62952 87 aa9.78□□□□□ -0.84
SHC1-210ENST00000448116 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
SHC1-210ENST00000448116 RASL10AQ92737 203 aa9.78□□□□□ -0.84
SHC1-210ENST00000448116 H7C1H1 209 aa9.78□□□□□ -0.84
SHC1-210ENST00000448116 IGHV4-39P01824 125 aa9.78□□□□□ -0.84
SHC1-210ENST00000448116 IGHV4-38-2P0DP08 117 aa9.78□□□□□ -0.84
SHC1-210ENST00000448116 DPH3P1Q9H4G8 78 aa9.78□□□□□ -0.84
SHC1-210ENST00000448116 TCTEX1D4Q5JR98 221 aa9.77□□□□□ -0.84
SHC1-210ENST00000448116 ITLN2Q8WWU7 325 aaPredicted RBP9.77□□□□□ -0.84
SHC1-210ENST00000448116 IGHV4-61A0A0C4DH41 118 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 F8VRH5 84 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 OVOL1O14753 267 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 Q6ZS46 218 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 RHPN1-AS1Q9BWJ2 59 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 PLNP26678 52 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 EMP1P54849 157 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 ORMDL2Q53FV1 153 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 C5orf47Q569G3 176 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 C2orf66Q6UXQ4 117 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 MTURNQ8N3F0 131 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 ANAPC13Q9BS18 74 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 CYSLTR1Q9Y271 337 aa9.77□□□□□ -0.85
SHC1-210ENST00000448116 IGHV4-4A0A075B6R2 117 aa9.76□□□□□ -0.85
SHC1-210ENST00000448116 CD300EQ496F6 205 aaPredicted RBP9.76□□□□□ -0.85
SHC1-210ENST00000448116 F5H697 171 aa9.76□□□□□ -0.85
SHC1-210ENST00000448116 NDUFA4O00483 81 aa9.76□□□□□ -0.85
SHC1-210ENST00000448116 IGKV3-20P01619 116 aa9.76□□□□□ -0.85
SHC1-210ENST00000448116 EDN2P20800 178 aa9.76□□□□□ -0.85
SHC1-210ENST00000448116 GNLYP22749 145 aa9.76□□□□□ -0.85
SHC1-210ENST00000448116 KLK9Q2XQG4 91 aa9.75□□□□□ -0.85
SHC1-210ENST00000448116 AMTNQ6UX39 209 aa9.75□□□□□ -0.85
SHC1-210ENST00000448116 JPT2Q9H910 190 aa9.75□□□□□ -0.85
SHC1-210ENST00000448116 KLK9Q9UKQ9 250 aa9.75□□□□□ -0.85
SHC1-210ENST00000448116 ABCA2Q9BZC7 2435 aa9.75□□□□□ -0.85
SHC1-210ENST00000448116 TM2D2Q9BX73 214 aa9.75□□□□□ -0.85
SHC1-210ENST00000448116 LENEPQ9Y5L5 61 aa9.75□□□□□ -0.85
SHC1-210ENST00000448116 C12orf74Q32Q52 190 aa9.75□□□□□ -0.85
SHC1-210ENST00000448116 IGLL5B9A064 214 aa9.74□□□□□ -0.85
SHC1-210ENST00000448116 C1QTNF4Q9BXJ3 329 aa9.74□□□□□ -0.85
SHC1-210ENST00000448116 A0A087WWL8 130 aa9.74□□□□□ -0.85
SHC1-210ENST00000448116 PRSS29PA6NIE9 313 aa9.74□□□□□ -0.85
SHC1-210ENST00000448116 HLA-DRB4P13762 266 aa9.74□□□□□ -0.85
SHC1-210ENST00000448116 SFTA2Q6UW10 78 aa9.74□□□□□ -0.85
SHC1-210ENST00000448116 SCGB1D4Q6XE38 83 aa9.74□□□□□ -0.85
SHC1-210ENST00000448116 PHLDA1Q8WV24 401 aaPredicted RBP9.74□□□□□ -0.85
SHC1-210ENST00000448116 HLA-DRB4X5D2U9 266 aa9.74□□□□□ -0.85
SHC1-210ENST00000448116 TOMM6Q96B49 74 aa9.73□□□□□ -0.85
SHC1-210ENST00000448116 MRPL16Q9NX20 251 aaKnown RBP9.73□□□□□ -0.85
SHC1-210ENST00000448116 CSDC2Q9Y534 153 aaKnown RBP9.73□□□□□ -0.85
SHC1-210ENST00000448116 H3BMG7 143 aa9.73□□□□□ -0.85
SHC1-210ENST00000448116 ZFHX3Q15911 3703 aa9.73□□□□□ -0.85
SHC1-210ENST00000448116 TRAV12-3A0A0B4J271 114 aa9.73□□□□□ -0.85
SHC1-210ENST00000448116 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
SHC1-210ENST00000448116 WFDC2Q14508 124 aa9.73□□□□□ -0.85
SHC1-210ENST00000448116 FAM74A4Q5TZK3 123 aa9.73□□□□□ -0.85
SHC1-210ENST00000448116 FAM159AQ6UWV7 190 aa9.73□□□□□ -0.85
SHC1-210ENST00000448116 BAALCQ8WXS3 180 aa9.73□□□□□ -0.85
SHC1-210ENST00000448116 C20orf78Q9BR46 151 aa9.73□□□□□ -0.85
SHC1-210ENST00000448116 PRADC1Q9BSG0 188 aa9.73□□□□□ -0.85
SHC1-210ENST00000448116 DUSP14O95147 198 aaKnown RBP9.72□□□□□ -0.85
SHC1-210ENST00000448116 RNASE3P12724 160 aaKnown RBP9.72□□□□□ -0.85
SHC1-210ENST00000448116 SOCS3O14543 225 aa9.72□□□□□ -0.85
SHC1-210ENST00000448116 CD7P09564 240 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms