RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 CNFNQ9BYD5 112 aa18.06■□□□□ 0.48
RFFL-206ENST00000447669 SCRT2Q9NQ03 307 aa18.06■□□□□ 0.48
RFFL-206ENST00000447669 PHLDA3Q9Y5J5 127 aa18.06■□□□□ 0.48
RFFL-206ENST00000447669 PRB2P02812 416 aaPredicted RBP18.06■□□□□ 0.48
RFFL-206ENST00000447669 TRGC1P0CF51 173 aa18.05■□□□□ 0.48
RFFL-206ENST00000447669 SAMD5Q5TGI4 173 aa18.05■□□□□ 0.48
RFFL-206ENST00000447669 DNLZQ5SXM8 178 aa18.05■□□□□ 0.48
RFFL-206ENST00000447669 WDR73Q6P4I2 378 aa18.05■□□□□ 0.48
RFFL-206ENST00000447669 MORN3Q6PF18 240 aaPredicted RBP18.05■□□□□ 0.48
RFFL-206ENST00000447669 LOC102724200A0A096LPH7 203 aaPredicted RBP18.04■□□□□ 0.48
RFFL-206ENST00000447669 RASL11AQ6T310 242 aa18.04■□□□□ 0.48
RFFL-206ENST00000447669 GSN-AS1Q9NRJ2 163 aa18.04■□□□□ 0.48
RFFL-206ENST00000447669 C9orf85Q96MD7 179 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 HIST1H2BKO60814 126 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 HLA-DQA1P01909 254 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 APCSP02743 223 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 HIST1H2BJP06899 126 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 EVI2AP22794 236 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 HIST1H2BOP23527 126 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 HIST1H2BBP33778 126 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 HIST1H2BDP58876 126 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 HIST1H2BCP62807 126 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 HIST2H2BEQ16778 126 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.03■□□□□ 0.48
RFFL-206ENST00000447669 HIST1H2BHQ93079 126 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 HIST1H2BNQ99877 126 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 HIST1H2BMQ99879 126 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 C20orf144Q9BQM9 153 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 JPT2Q9H910 190 aa18.03■□□□□ 0.48
RFFL-206ENST00000447669 AMN1Q8IY45 258 aa18.02■□□□□ 0.48
RFFL-206ENST00000447669 TRGV11A0A075B6L2 103 aa18.01■□□□□ 0.47
RFFL-206ENST00000447669 C1QTNF4Q9BXJ3 329 aa18.01■□□□□ 0.47
RFFL-206ENST00000447669 RAB5BP61020 215 aa18■□□□□ 0.47
RFFL-206ENST00000447669 C11orf72Q8NBR9 251 aa18■□□□□ 0.47
RFFL-206ENST00000447669 MT-ND6P03923 174 aa17.99■□□□□ 0.47
RFFL-206ENST00000447669 MED14OSP0DP75 135 aa17.99■□□□□ 0.47
RFFL-206ENST00000447669 GOLT1BQ9Y3E0 138 aa17.99■□□□□ 0.47
RFFL-206ENST00000447669 TMEM256Q8N2U0 113 aa17.99■□□□□ 0.47
RFFL-206ENST00000447669 DNHD1Q96M86 4753 aa17.99■□□□□ 0.47
RFFL-206ENST00000447669 IGHV4-4A0A075B6R2 117 aa17.98■□□□□ 0.47
RFFL-206ENST00000447669 COX19Q49B96 90 aa17.98■□□□□ 0.47
RFFL-206ENST00000447669 ZNF493Q6ZR52 646 aa17.98■□□□□ 0.47
RFFL-206ENST00000447669 CACNG7P62955 275 aa17.98■□□□□ 0.47
RFFL-206ENST00000447669 DEFB135Q30KP9 77 aa17.98■□□□□ 0.47
RFFL-206ENST00000447669 ZNF705AQ6ZN79 300 aaPredicted RBP17.98■□□□□ 0.47
RFFL-206ENST00000447669 A0A1B0GW15 77 aa17.97■□□□□ 0.47
RFFL-206ENST00000447669 C14orf178Q8N769 122 aaPredicted RBP17.97■□□□□ 0.47
RFFL-206ENST00000447669 LINC00467Q9BRT7 94 aa17.97■□□□□ 0.47
RFFL-206ENST00000447669 GATD1Q8NB37 220 aa17.96■□□□□ 0.47
RFFL-206ENST00000447669 GAS8-AS1O95177 125 aa17.96■□□□□ 0.47
RFFL-206ENST00000447669 FAM104BQ5XKR9 115 aa17.96■□□□□ 0.47
RFFL-206ENST00000447669 RNASE8Q8TDE3 154 aaKnown RBP17.96■□□□□ 0.47
RFFL-206ENST00000447669 RCHY1Q96PM5 261 aa17.96■□□□□ 0.47
RFFL-206ENST00000447669 TMEM191AQ9H0A3 160 aa17.96■□□□□ 0.47
RFFL-206ENST00000447669 SMKR1H3BMG3 65 aa17.95■□□□□ 0.46
RFFL-206ENST00000447669 S100A8P05109 93 aa17.95■□□□□ 0.46
RFFL-206ENST00000447669 SRIP30626 198 aa17.95■□□□□ 0.46
RFFL-206ENST00000447669 RNF185Q96GF1 192 aa17.95■□□□□ 0.46
RFFL-206ENST00000447669 RIPPLY3P57055 190 aa17.94■□□□□ 0.46
RFFL-206ENST00000447669 ZNF415Q09FC8 603 aa17.94■□□□□ 0.46
RFFL-206ENST00000447669 ZNF876PQ49A33 203 aa17.94■□□□□ 0.46
RFFL-206ENST00000447669 A0A087WWL8 130 aa17.94■□□□□ 0.46
RFFL-206ENST00000447669 NDUFA6P56556 154 aa17.94■□□□□ 0.46
RFFL-206ENST00000447669 SAMD10Q9BYL1 202 aa17.94■□□□□ 0.46
RFFL-206ENST00000447669 NXPH4O95158 308 aa17.93■□□□□ 0.46
RFFL-206ENST00000447669 APOC4P55056 127 aa17.93■□□□□ 0.46
RFFL-206ENST00000447669 MRPL51Q4U2R6 128 aaKnown RBP17.93■□□□□ 0.46
RFFL-206ENST00000447669 MRPL16Q9NX20 251 aaKnown RBP17.93■□□□□ 0.46
RFFL-206ENST00000447669 TRAV26-2A0A0B4J265 109 aa17.93■□□□□ 0.46
RFFL-206ENST00000447669 NCR2O95944 276 aa17.93■□□□□ 0.46
RFFL-206ENST00000447669 RAB4AP20338 218 aa17.93■□□□□ 0.46
RFFL-206ENST00000447669 KIR2DL5BA0A0G2JN68 375 aa17.92■□□□□ 0.46
RFFL-206ENST00000447669 KIR2DL5BA0A0G2JPC4 375 aa17.92■□□□□ 0.46
RFFL-206ENST00000447669 PLAC8L1A1L4L8 177 aa17.92■□□□□ 0.46
RFFL-206ENST00000447669 KIR2DL5AQ8N109 375 aa17.92■□□□□ 0.46
RFFL-206ENST00000447669 KIR2DL5BQ8NHK3 375 aa17.92■□□□□ 0.46
RFFL-206ENST00000447669 EMP1P54849 157 aa17.91■□□□□ 0.46
RFFL-206ENST00000447669 IQCJQ1A5X6 159 aa17.91■□□□□ 0.46
RFFL-206ENST00000447669 RRN3P1Q2M238 152 aa17.91■□□□□ 0.46
RFFL-206ENST00000447669 TMEM263Q8WUH6 116 aaKnown RBP17.91■□□□□ 0.46
RFFL-206ENST00000447669 ALKBH7Q9BT30 221 aaPredicted RBP17.91■□□□□ 0.46
RFFL-206ENST00000447669 X6R8D5 127 aa17.91■□□□□ 0.46
RFFL-206ENST00000447669 NACAE9PAV3 2078 aa17.9■□□□□ 0.46
RFFL-206ENST00000447669 D6R8Y8 96 aa17.9■□□□□ 0.46
RFFL-206ENST00000447669 GATA1P15976 413 aaPredicted RBP17.9■□□□□ 0.46
RFFL-206ENST00000447669 FAM74A4Q5TZK3 123 aa17.89■□□□□ 0.46
RFFL-206ENST00000447669 NOP10Q9NPE3 64 aaKnown RBP17.89■□□□□ 0.46
RFFL-206ENST00000447669 M0R2P5 195 aa17.89■□□□□ 0.45
RFFL-206ENST00000447669 MGPP08493 103 aa17.89■□□□□ 0.45
RFFL-206ENST00000447669 SNRPEP62304 92 aaKnown RBP17.89■□□□□ 0.45
RFFL-206ENST00000447669 ZMAT5Q9UDW3 170 aaKnown RBP17.89■□□□□ 0.45
RFFL-206ENST00000447669 SMIM15Q7Z3B0 74 aa17.88■□□□□ 0.45
RFFL-206ENST00000447669 SYT8Q8NBV8 401 aa17.88■□□□□ 0.45
RFFL-206ENST00000447669 IL17DQ8TAD2 202 aa17.88■□□□□ 0.45
RFFL-206ENST00000447669 AP1S3Q96PC3 154 aa17.88■□□□□ 0.45
RFFL-206ENST00000447669 KIF25-AS1Q9Y6Z4 181 aa17.88■□□□□ 0.45
RFFL-206ENST00000447669 DEFB4AO15263 64 aa17.88■□□□□ 0.45
RFFL-206ENST00000447669 IGHV3-73A0A0B4J1V6 119 aa17.87■□□□□ 0.45
RFFL-206ENST00000447669 S100A6P06703 90 aa17.86■□□□□ 0.45
RFFL-206ENST00000447669 LINC00315P59091 139 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms