RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 SRSF1Q07955 248 aaKnown RBP eCLIP7.1□□□□□ -1.27
KLHL3-202ENST00000447439 OCIAD2Q56VL3 154 aa7.1□□□□□ -1.27
KLHL3-202ENST00000447439 TRAV12-3A0A0B4J271 114 aa7.09□□□□□ -1.27
KLHL3-202ENST00000447439 RNF223E7ERA6 249 aa7.09□□□□□ -1.27
KLHL3-202ENST00000447439 LINC00477Q96M19 166 aa7.09□□□□□ -1.27
KLHL3-202ENST00000447439 NHP2Q9NX24 153 aaKnown RBP7.09□□□□□ -1.27
KLHL3-202ENST00000447439 FBN2P35556 2912 aa7.09□□□□□ -1.27
KLHL3-202ENST00000447439 OVOL1O14753 267 aa7.09□□□□□ -1.27
KLHL3-202ENST00000447439 ZNF688P0C7X2 276 aa7.09□□□□□ -1.27
KLHL3-202ENST00000447439 SUMO2P61956 95 aaKnown RBP7.09□□□□□ -1.27
KLHL3-202ENST00000447439 SCGB3A1Q96QR1 104 aa7.09□□□□□ -1.27
KLHL3-202ENST00000447439 CENPEQ02224 2701 aa7.09□□□□□ -1.27
KLHL3-202ENST00000447439 DOPEY2Q9Y3R5 2298 aa7.09□□□□□ -1.27
KLHL3-202ENST00000447439 IGHV4-4A0A075B6R2 117 aa7.08□□□□□ -1.28
KLHL3-202ENST00000447439 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.08□□□□□ -1.28
KLHL3-202ENST00000447439 ATP5LO75964 103 aa7.08□□□□□ -1.28
KLHL3-202ENST00000447439 CRIP2P52943 208 aaPredicted RBP7.08□□□□□ -1.28
KLHL3-202ENST00000447439 IGSF10Q6WRI0 2623 aa7.08□□□□□ -1.28
KLHL3-202ENST00000447439 A0A087WX48 190 aa7.08□□□□□ -1.28
KLHL3-202ENST00000447439 DEFB112Q30KQ8 113 aa7.08□□□□□ -1.28
KLHL3-202ENST00000447439 VPS25Q9BRG1 176 aa7.08□□□□□ -1.28
KLHL3-202ENST00000447439 CSTL1Q9H114 145 aa7.08□□□□□ -1.28
KLHL3-202ENST00000447439 PRB1P04280 392 aa7.07□□□□□ -1.28
KLHL3-202ENST00000447439 FAM74A4Q5TZK3 123 aa7.07□□□□□ -1.28
KLHL3-202ENST00000447439 UFSP1Q6NVU6 142 aa7.07□□□□□ -1.28
KLHL3-202ENST00000447439 DPH3P1Q9H4G8 78 aa7.07□□□□□ -1.28
KLHL3-202ENST00000447439 DAZ1Q9NQZ3 744 aaKnown RBP7.07□□□□□ -1.28
KLHL3-202ENST00000447439 SPCS1Q9Y6A9 102 aa7.07□□□□□ -1.28
KLHL3-202ENST00000447439 USP9YO00507 2555 aaPredicted RBP7.07□□□□□ -1.28
KLHL3-202ENST00000447439 C2orf66Q6UXQ4 117 aa7.07□□□□□ -1.28
KLHL3-202ENST00000447439 MRAP2Q96G30 205 aa7.07□□□□□ -1.28
KLHL3-202ENST00000447439 USMG5Q96IX5 58 aa7.07□□□□□ -1.28
KLHL3-202ENST00000447439 FAM19A4Q96LR4 140 aa7.07□□□□□ -1.28
KLHL3-202ENST00000447439 SMPXQ9UHP9 88 aa7.07□□□□□ -1.28
KLHL3-202ENST00000447439 A0A1W2PPM0 123 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 F5H697 171 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 K7EP34 96 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 IGLV1-40P01703 118 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 CD7P09564 240 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 CDKN1BP46527 198 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 MTURNQ8N3F0 131 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 CHTOPQ9Y3Y2 248 aaKnown RBP7.06□□□□□ -1.28
KLHL3-202ENST00000447439 LENEPQ9Y5L5 61 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 ZFYVE26Q68DK2 2539 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 MUC4Q99102 2169 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 DUSP14O95147 198 aaKnown RBP7.06□□□□□ -1.28
KLHL3-202ENST00000447439 SMIM13P0DJ93 91 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 RPL39P62891 51 aaKnown RBP7.06□□□□□ -1.28
KLHL3-202ENST00000447439 SAMD5Q5TGI4 173 aa7.06□□□□□ -1.28
KLHL3-202ENST00000447439 PRM2P04554 102 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 RIPPLY3P57055 190 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 BAALCQ8WXS3 180 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 MDFICQ9P1T7 246 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 MYO18BQ8IUG5 2567 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 CACNA1AO00555 2505 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 HTN1P15515 57 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 SYNJ2BPP57105 145 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 CFHR3Q02985 330 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 FAM159AQ6UWV7 190 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 CEND1Q8N111 149 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 DCANP1Q8TF63 244 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 SORL1Q92673 2214 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 TOMM6Q96B49 74 aa7.05□□□□□ -1.28
KLHL3-202ENST00000447439 PRSS29PA6NIE9 313 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 F8VRH5 84 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 H7C1H1 209 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 HLA-DRB4P13762 266 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 SPINK13Q1W4C9 94 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 SUMO4Q6EEV6 95 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 GTF2H5Q6ZYL4 71 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 NEXN-AS1Q8NBZ9 246 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 KLHL30-AS1Q8NEE0 82 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 HLA-DRB4X5D2U9 266 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 AGRNO00468 2067 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 LINC00315P59091 139 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 SFTA2Q6UW10 78 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 HIGD1BQ9P298 99 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 CYSLTR1Q9Y271 337 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 DOPEY1Q5JWR5 2465 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 BRI3O95415 125 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 TGFAP01135 160 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 DEFB136Q30KP8 78 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 CD300EQ496F6 205 aaPredicted RBP7.04□□□□□ -1.28
KLHL3-202ENST00000447439 ORMDL2Q53FV1 153 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 AMTNQ6UX39 209 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 C18orf65Q6ZTR6 163 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 PHLDA1Q8WV24 401 aaPredicted RBP7.04□□□□□ -1.28
KLHL3-202ENST00000447439 OPRPNQ99935 248 aaPredicted RBP7.04□□□□□ -1.28
KLHL3-202ENST00000447439 TP53TG1Q9Y2A0 90 aa7.04□□□□□ -1.28
KLHL3-202ENST00000447439 ZNF256Q9Y2P7 627 aaPredicted RBP7.04□□□□□ -1.28
KLHL3-202ENST00000447439 B4DSR2 109 aa7.03□□□□□ -1.28
KLHL3-202ENST00000447439 H3BUA1 57 aa7.03□□□□□ -1.28
KLHL3-202ENST00000447439 TSHBP01222 138 aa7.03□□□□□ -1.28
KLHL3-202ENST00000447439 FABP2P12104 132 aa7.03□□□□□ -1.28
KLHL3-202ENST00000447439 PLNP26678 52 aa7.03□□□□□ -1.28
KLHL3-202ENST00000447439 PSMB8P28062 276 aa7.03□□□□□ -1.28
KLHL3-202ENST00000447439 PLEKHB2Q96CS7 222 aa7.03□□□□□ -1.28
KLHL3-202ENST00000447439 DUX3Q96PT4 197 aa7.03□□□□□ -1.28
KLHL3-202ENST00000447439 KIF25-AS1Q9Y6Z4 181 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms