RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 C6orf223Q8N319 242 aa8.65□□□□□ -1.02
SSR4-205ENST00000447375 TRAV26-1A0A087WT03 109 aa8.64□□□□□ -1.03
SSR4-205ENST00000447375 IGKV3D-20A0A0C4DH25 116 aa8.64□□□□□ -1.03
SSR4-205ENST00000447375 H3BNG1 76 aa8.64□□□□□ -1.03
SSR4-205ENST00000447375 M0R2P5 195 aa8.64□□□□□ -1.03
SSR4-205ENST00000447375 ZNF674Q2M3X9 581 aa8.64□□□□□ -1.03
SSR4-205ENST00000447375 C11orf52Q96A22 123 aa8.64□□□□□ -1.03
SSR4-205ENST00000447375 MLST8Q9BVC4 326 aa8.64□□□□□ -1.03
SSR4-205ENST00000447375 BLOC1S1P78537 153 aa8.63□□□□□ -1.03
SSR4-205ENST00000447375 MEF2BQ02080 365 aaPredicted RBP8.63□□□□□ -1.03
SSR4-205ENST00000447375 FAM162BQ5T6X4 162 aa8.63□□□□□ -1.03
SSR4-205ENST00000447375 LYPD6BQ8NI32 183 aa8.63□□□□□ -1.03
SSR4-205ENST00000447375 PTH2Q96A98 100 aa8.63□□□□□ -1.03
SSR4-205ENST00000447375 C9orf85Q96MD7 179 aa8.63□□□□□ -1.03
SSR4-205ENST00000447375 KRBOX1C9JBD0 128 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 PDE6DO43924 150 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 SH2D1AO60880 128 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 NUDT3O95989 172 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 IFNA1P01562 189 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 ORM1P02763 201 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 BCL2P10415 239 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 RNASE3P12724 160 aaKnown RBP8.62□□□□□ -1.03
SSR4-205ENST00000447375 TAGLN2P37802 199 aaKnown RBP8.62□□□□□ -1.03
SSR4-205ENST00000447375 RPL35P42766 123 aaKnown RBP8.62□□□□□ -1.03
SSR4-205ENST00000447375 SLAQ13239 276 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 FHL2Q14192 279 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 DNLZQ5SXM8 178 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 Q5VSD8 79 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 BAGE2Q86Y30 109 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 VSIG2Q96IQ7 327 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 VAX2Q9UIW0 290 aa8.62□□□□□ -1.03
SSR4-205ENST00000447375 A0A0J9YY99 117 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 NBDYA0A0U1RRE5 68 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 B4DEV8 164 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 J3QL48 77 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 IGHV3-53P01767 116 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 FAM3BP58499 235 aaPredicted RBP8.61□□□□□ -1.03
SSR4-205ENST00000447375 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 NHLRC2Q8NBF2 726 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 FRZBQ92765 325 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 DERL1Q9BUN8 251 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 PRO0255Q9UI72 69 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 HHLA3Q9XRX5 114 aa8.61□□□□□ -1.03
SSR4-205ENST00000447375 TRAV4A0A0B4J268 109 aa8.6□□□□□ -1.03
SSR4-205ENST00000447375 LINC01559Q495D7 138 aa8.6□□□□□ -1.03
SSR4-205ENST00000447375 ZNF479Q96JC4 524 aa8.6□□□□□ -1.03
SSR4-205ENST00000447375 IL36BQ9NZH7 164 aa8.6□□□□□ -1.03
SSR4-205ENST00000447375 PGPEP1LA6NFU8 196 aa8.59□□□□□ -1.03
SSR4-205ENST00000447375 C9JCJ5 164 aa8.59□□□□□ -1.03
SSR4-205ENST00000447375 M0R036 132 aa8.59□□□□□ -1.03
SSR4-205ENST00000447375 PAX4O43316 350 aa8.59□□□□□ -1.03
SSR4-205ENST00000447375 SFTA3P0C7M3 94 aa8.59□□□□□ -1.03
SSR4-205ENST00000447375 S100A4P26447 101 aaKnown RBP8.59□□□□□ -1.03
SSR4-205ENST00000447375 ASIPP42127 132 aa8.59□□□□□ -1.03
SSR4-205ENST00000447375 CRYBA4P53673 196 aa8.59□□□□□ -1.03
SSR4-205ENST00000447375 PIK3CD-AS1Q5SR53 167 aa8.59□□□□□ -1.03
SSR4-205ENST00000447375 OR4C5Q8NGB2 326 aa8.59□□□□□ -1.03
SSR4-205ENST00000447375 MED9Q9NWA0 146 aa8.59□□□□□ -1.03
SSR4-205ENST00000447375 A0A096LPF7 62 aa8.58□□□□□ -1.04
SSR4-205ENST00000447375 TRGV4A0A0C4DH28 118 aa8.58□□□□□ -1.04
SSR4-205ENST00000447375 RAB19A4D1S5 217 aa8.58□□□□□ -1.04
SSR4-205ENST00000447375 IGLV2-8P01709 118 aa8.58□□□□□ -1.04
SSR4-205ENST00000447375 CCL18P55774 89 aa8.58□□□□□ -1.04
SSR4-205ENST00000447375 CENPWQ5EE01 88 aa8.58□□□□□ -1.04
SSR4-205ENST00000447375 ZNF506Q5JVG8 444 aa8.58□□□□□ -1.04
SSR4-205ENST00000447375 CFAP126Q5VTH2 177 aa8.58□□□□□ -1.04
SSR4-205ENST00000447375 TRBV20OR9-2A0A075B6H5 130 aa8.57□□□□□ -1.04
SSR4-205ENST00000447375 GRIFINA4D1Z8 144 aa8.57□□□□□ -1.04
SSR4-205ENST00000447375 RBFOX3A6NFN3 312 aa8.57□□□□□ -1.04
SSR4-205ENST00000447375 RS1O15537 224 aa8.57□□□□□ -1.04
SSR4-205ENST00000447375 CIDEAO60543 219 aa8.57□□□□□ -1.04
SSR4-205ENST00000447375 ARMS2P0C7Q2 107 aa8.57□□□□□ -1.04
SSR4-205ENST00000447375 GNG4P50150 75 aa8.57□□□□□ -1.04
SSR4-205ENST00000447375 SMIM12Q96EX1 92 aa8.57□□□□□ -1.04
SSR4-205ENST00000447375 LINC00588Q9Y4M8 146 aa8.57□□□□□ -1.04
SSR4-205ENST00000447375 HMCN2Q8NDA2 5059 aa8.56□□□□□ -1.04
SSR4-205ENST00000447375 SRRM2Q9UQ35 2752 aaKnown RBP8.56□□□□□ -1.04
SSR4-205ENST00000447375 TMSB15BA0A087X1C1 80 aa8.56□□□□□ -1.04
SSR4-205ENST00000447375 H3BVH4 76 aa8.56□□□□□ -1.04
SSR4-205ENST00000447375 ESRGQ1W209 222 aa8.56□□□□□ -1.04
SSR4-205ENST00000447375 TEX261Q6UWH6 196 aa8.56□□□□□ -1.04
SSR4-205ENST00000447375 ICOSQ9Y6W8 199 aa8.56□□□□□ -1.04
SSR4-205ENST00000447375 TMEM250H0YL14 139 aa8.55□□□□□ -1.04
SSR4-205ENST00000447375 CXCL1P09341 107 aa8.55□□□□□ -1.04
SSR4-205ENST00000447375 GATA1P15976 413 aaPredicted RBP8.55□□□□□ -1.04
SSR4-205ENST00000447375 XGP55808 180 aa8.55□□□□□ -1.04
SSR4-205ENST00000447375 MRPL23Q16540 153 aaKnown RBP8.55□□□□□ -1.04
SSR4-205ENST00000447375 DMRTA1Q5VZB9 504 aa8.55□□□□□ -1.04
SSR4-205ENST00000447375 PRR27Q6MZM9 219 aa8.55□□□□□ -1.04
SSR4-205ENST00000447375 ZNRF2Q8NHG8 242 aa8.55□□□□□ -1.04
SSR4-205ENST00000447375 FLG2Q5D862 2391 aaPredicted RBP8.54□□□□□ -1.04
SSR4-205ENST00000447375 C19orf71A6NCJ1 209 aa8.54□□□□□ -1.04
SSR4-205ENST00000447375 A8MWV9 139 aa8.54□□□□□ -1.04
SSR4-205ENST00000447375 NDUFS6O75380 124 aaKnown RBP8.54□□□□□ -1.04
SSR4-205ENST00000447375 MGST1P10620 155 aaKnown RBP8.54□□□□□ -1.04
SSR4-205ENST00000447375 RPL19P84098 196 aaKnown RBP8.54□□□□□ -1.04
SSR4-205ENST00000447375 ZFP2Q6ZN57 461 aa8.54□□□□□ -1.04
SSR4-205ENST00000447375 SYT8Q8NBV8 401 aa8.54□□□□□ -1.04
SSR4-205ENST00000447375 PHLDA3Q9Y5J5 127 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms