RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 TMEM141Q96I45 108 aa1.92□□□□□ -2.1
LINC00440-201ENST00000446579 NDUFA12Q9UI09 145 aa1.92□□□□□ -2.1
LINC00440-201ENST00000446579 IER3IP1Q9Y5U9 82 aa1.92□□□□□ -2.1
LINC00440-201ENST00000446579 NCOA2Q15596 1464 aa1.92□□□□□ -2.1
LINC00440-201ENST00000446579 MYOM3Q5VTT5 1437 aa1.91□□□□□ -2.1
LINC00440-201ENST00000446579 IGKV2-40A0A087WW87 121 aaPredicted RBP1.91□□□□□ -2.1
LINC00440-201ENST00000446579 LOC110117498A0A087WWA1 95 aa1.91□□□□□ -2.1
LINC00440-201ENST00000446579 SPAARA0A1B0GVQ0 90 aa1.91□□□□□ -2.1
LINC00440-201ENST00000446579 TNFP01375 233 aa1.91□□□□□ -2.1
LINC00440-201ENST00000446579 IGKV2D-40P01614 121 aaPredicted RBP1.91□□□□□ -2.1
LINC00440-201ENST00000446579 IGHV3-30P01768 117 aa1.91□□□□□ -2.1
LINC00440-201ENST00000446579 IGHV3-30-5P0DP03 117 aa1.91□□□□□ -2.1
LINC00440-201ENST00000446579 UNQ6190/PRO20217Q6UXQ8 127 aa1.91□□□□□ -2.1
LINC00440-201ENST00000446579 SVBPQ8N300 66 aa1.91□□□□□ -2.1
LINC00440-201ENST00000446579 DMAC1Q96GE9 116 aa1.91□□□□□ -2.1
LINC00440-201ENST00000446579 MRPL57Q9BQC6 102 aaKnown RBP1.91□□□□□ -2.1
LINC00440-201ENST00000446579 LIMD2Q9BT23 127 aa1.91□□□□□ -2.1
LINC00440-201ENST00000446579 CYSTM1Q9H1C7 97 aa1.91□□□□□ -2.1
LINC00440-201ENST00000446579 DIDO1Q9BTC0 2240 aaKnown RBP1.9□□□□□ -2.1
LINC00440-201ENST00000446579 CFTRP13569 1480 aa1.9□□□□□ -2.11
LINC00440-201ENST00000446579 PLEKHH2Q8IVE3 1493 aa1.9□□□□□ -2.11
LINC00440-201ENST00000446579 MICAL3Q7RTP6 2002 aa1.9□□□□□ -2.11
LINC00440-201ENST00000446579 ZFHX2Q9C0A1 2572 aaPredicted RBP1.9□□□□□ -2.11
LINC00440-201ENST00000446579 IGKV3-7A0A075B6H7 116 aa1.9□□□□□ -2.11
LINC00440-201ENST00000446579 HCRTO43612 131 aa1.9□□□□□ -2.11
LINC00440-201ENST00000446579 SMIM6P0DI80 62 aa1.9□□□□□ -2.11
LINC00440-201ENST00000446579 RPRMQ9NS64 109 aa1.9□□□□□ -2.11
LINC00440-201ENST00000446579 ZFC3H1O60293 1989 aaKnown RBP1.9□□□□□ -2.11
LINC00440-201ENST00000446579 STRCQ7RTU9 1775 aa1.9□□□□□ -2.11
LINC00440-201ENST00000446579 FREM3P0C091 2139 aa1.9□□□□□ -2.11
LINC00440-201ENST00000446579 BAHCC1Q9P281 2608 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 TRBV10-1A0A0K0K1A3 114 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 NUPR2A6NF83 97 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 HIGD1CA8MV81 97 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 TFF1P04155 84 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 CCKP06307 115 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 PDE6GP18545 87 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 CBLN1P23435 193 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 UBE2G1P62253 170 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 CATR1Q13166 79 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 SPRNQ5BIV9 151 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 S100A7L2Q5SY68 101 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 C12orf73Q69YU5 71 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 LINC00526Q96FQ7 95 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 ZMYM4Q5VZL5 1548 aa1.89□□□□□ -2.11
LINC00440-201ENST00000446579 COL11A1P12107 1806 aaPredicted RBP1.89□□□□□ -2.11
LINC00440-201ENST00000446579 THOC2Q8NI27 1593 aaKnown RBP1.89□□□□□ -2.11
LINC00440-201ENST00000446579 MBD5Q9P267 1494 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 PTPN23Q9H3S7 1636 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 BIVM-ERCC5R4GMW8 1640 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 HMGXB3Q12766 1538 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 EHBP1L1Q8N3D4 1523 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 FAM135AQ9P2D6 1515 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 MDC1Q14676 2089 aaKnown RBP1.88□□□□□ -2.11
LINC00440-201ENST00000446579 TCRBV3S1A0A5B6 114 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 TMEM218A2RU14 115 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 IGLV3-1P01715 115 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 C9orf116Q5BN46 136 aaPredicted RBP1.88□□□□□ -2.11
LINC00440-201ENST00000446579 C9orf153Q5TBE3 101 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 Q6AWC8 147 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 NDUFA11Q86Y39 141 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 NUMA1Q14980 2115 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 COL24A1Q17RW2 1714 aa1.88□□□□□ -2.11
LINC00440-201ENST00000446579 CXorf51AA0A1B0GTR3 108 aa1.87□□□□□ -2.11
LINC00440-201ENST00000446579 IFNA17P01571 189 aa1.87□□□□□ -2.11
LINC00440-201ENST00000446579 DAPK1P53355 1430 aa1.87□□□□□ -2.11
LINC00440-201ENST00000446579 FXYD4P59646 89 aa1.87□□□□□ -2.11
LINC00440-201ENST00000446579 SLC48A1Q6P1K1 146 aa1.87□□□□□ -2.11
LINC00440-201ENST00000446579 MRPL35Q9NZE8 188 aaKnown RBP1.87□□□□□ -2.11
LINC00440-201ENST00000446579 ZNF518AQ6AHZ1 1483 aa1.87□□□□□ -2.11
LINC00440-201ENST00000446579 RALGAPBQ86X10 1494 aa1.87□□□□□ -2.11
LINC00440-201ENST00000446579 BLMP54132 1417 aaPredicted RBP1.86□□□□□ -2.11
LINC00440-201ENST00000446579 SCAPERQ9BY12 1400 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 J3QKU1 62 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 S100A8P05109 93 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 IFITM1P13164 125 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 NPC2P61916 151 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 Q6ZS92 163 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 C8orf59Q8N0T1 100 aaPredicted RBP1.86□□□□□ -2.11
LINC00440-201ENST00000446579 SPTSSBQ8NFR3 76 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 C10orf105Q8TEF2 133 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 TSKUQ8WUA8 353 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 LSM10Q969L4 123 aaKnown RBP1.86□□□□□ -2.11
LINC00440-201ENST00000446579 COA4Q9NYJ1 87 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 C22orf24Q9Y442 160 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 NKTRP30414 1462 aaKnown RBP1.86□□□□□ -2.11
LINC00440-201ENST00000446579 BAZ2BQ9UIF8 2168 aaKnown RBP1.86□□□□□ -2.11
LINC00440-201ENST00000446579 FANCMQ8IYD8 2048 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 SCN3AQ9NY46 2000 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 RTTNQ86VV8 2226 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 ABCA10Q8WWZ4 1543 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 UGGT2Q9NYU1 1516 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 ARHGEF12Q9NZN5 1544 aa1.86□□□□□ -2.11
LINC00440-201ENST00000446579 EIF4G3O43432 1585 aaKnown RBP1.85□□□□□ -2.11
LINC00440-201ENST00000446579 ABCC5O15440 1437 aa1.85□□□□□ -2.11
LINC00440-201ENST00000446579 FN1P02751 2386 aaKnown RBP1.85□□□□□ -2.11
LINC00440-201ENST00000446579 ERBINQ96RT1 1412 aa1.85□□□□□ -2.11
LINC00440-201ENST00000446579 ANKRD50Q9ULJ7 1429 aa1.85□□□□□ -2.11
LINC00440-201ENST00000446579 FAM24AA6NFZ4 105 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 310.7 ms