RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 Q9HAA7 133 aa6.99□□□□□ -1.29
PTPRN-208ENST00000446182 WFDC1Q9HC57 220 aa6.99□□□□□ -1.29
PTPRN-208ENST00000446182 LYPD6BQ8NI32 183 aa6.98□□□□□ -1.29
PTPRN-208ENST00000446182 HMCN2Q8NDA2 5059 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 TRAV8-6A0A0B4J262 113 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 TRAV21A0A0B4J279 112 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 IGHV3-30P01768 117 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 IGHV3-33P01772 117 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 TYMSP04818 313 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 PFN1P07737 140 aaKnown RBP6.97□□□□□ -1.29
PTPRN-208ENST00000446182 IGHV3-30-3P0DP02 117 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 IGHV3-30-5P0DP03 117 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 SERF2P84101 59 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 WFDC2Q14508 124 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 RPL7L1Q6DKI1 246 aaKnown RBP6.97□□□□□ -1.29
PTPRN-208ENST00000446182 Q6ZSA8 131 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 SVBPQ8N300 66 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 SLC25A29Q8N8R3 303 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 TVP23CQ96ET8 276 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 ATP5SQ99766 215 aa6.97□□□□□ -1.29
PTPRN-208ENST00000446182 PGPA6NDG6 321 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 FBLL1A6NHQ2 334 aaKnown RBP6.96□□□□□ -1.3
PTPRN-208ENST00000446182 KRTAP29-1A8MX34 341 aaPredicted RBP6.96□□□□□ -1.3
PTPRN-208ENST00000446182 C17orf112F2Z3M2 114 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 F6UZH7 168 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 NDUFS6O75380 124 aaKnown RBP6.96□□□□□ -1.3
PTPRN-208ENST00000446182 TAGLN2P37802 199 aaKnown RBP6.96□□□□□ -1.3
PTPRN-208ENST00000446182 PEA15Q15121 130 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 KHDC3LQ587J8 217 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 OR10J3Q5JRS4 329 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 FFAR4Q5NUL3 377 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 LELP1Q5T871 98 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 SCGB1C1Q8TD33 95 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 PSMG3Q9BT73 122 aaPredicted RBP6.96□□□□□ -1.3
PTPRN-208ENST00000446182 SDF2L1Q9HCN8 221 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 OTORQ9NRC9 128 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 RPH3ALQ9UNE2 315 aa6.96□□□□□ -1.3
PTPRN-208ENST00000446182 FAT3Q8TDW7 4589 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 TRAV8-1A0A0A6YYK1 113 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 TRBV6-4A0A1B0GX49 114 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 EIF3GO75821 320 aaKnown RBP eCLIP6.95□□□□□ -1.3
PTPRN-208ENST00000446182 MBP02144 154 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 PLA2G1BP04054 148 aaKnown RBP6.95□□□□□ -1.3
PTPRN-208ENST00000446182 TAS2R45P59539 299 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 LAGE3Q14657 143 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 RHOHQ15669 191 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 CFAP126Q5VTH2 177 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 GOLT1AQ6ZVE7 132 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 LINC00528Q8N1L1 170 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 CMTM2Q8TAZ6 248 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 PRADC1Q9BSG0 188 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 SEC11CQ9BY50 192 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 TREM1Q9NP99 234 aa6.95□□□□□ -1.3
PTPRN-208ENST00000446182 LRP1Q07954 4544 aaKnown RBP6.95□□□□□ -1.3
PTPRN-208ENST00000446182 TRAV1-1A0A0B4J248 108 aa6.94□□□□□ -1.3
PTPRN-208ENST00000446182 TMEM218A2RU14 115 aa6.94□□□□□ -1.3
PTPRN-208ENST00000446182 RS1O15537 224 aa6.94□□□□□ -1.3
PTPRN-208ENST00000446182 SNAPINO95295 136 aa6.94□□□□□ -1.3
PTPRN-208ENST00000446182 ZNF876PQ49A33 203 aa6.94□□□□□ -1.3
PTPRN-208ENST00000446182 C10orf91Q5T1B1 145 aa6.94□□□□□ -1.3
PTPRN-208ENST00000446182 AKR1C8PQ5T2L2 129 aa6.94□□□□□ -1.3
PTPRN-208ENST00000446182 ARL6IP6Q8N6S5 226 aa6.94□□□□□ -1.3
PTPRN-208ENST00000446182 KCNS1Q96KK3 526 aa6.94□□□□□ -1.3
PTPRN-208ENST00000446182 TM2D2Q9BX73 214 aa6.94□□□□□ -1.3
PTPRN-208ENST00000446182 SMIM3Q9BZL3 60 aa6.94□□□□□ -1.3
PTPRN-208ENST00000446182 CARHSP1Q9Y2V2 147 aaKnown RBP6.94□□□□□ -1.3
PTPRN-208ENST00000446182 IGHV3-73A0A0B4J1V6 119 aa6.93□□□□□ -1.3
PTPRN-208ENST00000446182 CIDEAO60543 219 aa6.93□□□□□ -1.3
PTPRN-208ENST00000446182 GNG5P63218 68 aa6.93□□□□□ -1.3
PTPRN-208ENST00000446182 Q8N3U1 123 aa6.93□□□□□ -1.3
PTPRN-208ENST00000446182 OR2G3Q8NGZ4 309 aa6.93□□□□□ -1.3
PTPRN-208ENST00000446182 ATP6V0E2Q8NHE4 81 aa6.93□□□□□ -1.3
PTPRN-208ENST00000446182 SUN5Q8TC36 379 aa6.93□□□□□ -1.3
PTPRN-208ENST00000446182 DEFB104AQ8WTQ1 72 aa6.93□□□□□ -1.3
PTPRN-208ENST00000446182 GTSF1LQ9H1H1 148 aa6.93□□□□□ -1.3
PTPRN-208ENST00000446182 C11orf21Q9P2W6 132 aa6.93□□□□□ -1.3
PTPRN-208ENST00000446182 LECT2O14960 151 aa6.92□□□□□ -1.3
PTPRN-208ENST00000446182 HMGB3O15347 200 aaKnown RBP6.92□□□□□ -1.3
PTPRN-208ENST00000446182 ZNF80P51504 273 aaPredicted RBP6.92□□□□□ -1.3
PTPRN-208ENST00000446182 C9orf85Q96MD7 179 aa6.92□□□□□ -1.3
PTPRN-208ENST00000446182 PKHD1L1Q86WI1 4243 aa6.91□□□□□ -1.3
PTPRN-208ENST00000446182 PGPEP1LA6NFU8 196 aa6.91□□□□□ -1.3
PTPRN-208ENST00000446182 IFNA1P01562 189 aa6.91□□□□□ -1.3
PTPRN-208ENST00000446182 LINC00694P0DN24 101 aa6.91□□□□□ -1.3
PTPRN-208ENST00000446182 MGST1P10620 155 aaKnown RBP6.91□□□□□ -1.3
PTPRN-208ENST00000446182 ZNF506Q5JVG8 444 aa6.91□□□□□ -1.3
PTPRN-208ENST00000446182 PQLC2Q6ZP29 291 aa6.91□□□□□ -1.3
PTPRN-208ENST00000446182 PTH2Q96A98 100 aa6.91□□□□□ -1.3
PTPRN-208ENST00000446182 SGK494Q96LW2 274 aa6.91□□□□□ -1.3
PTPRN-208ENST00000446182 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.9□□□□□ -1.3
PTPRN-208ENST00000446182 TRAV8-3A0A0A6YYJ7 113 aa6.9□□□□□ -1.3
PTPRN-208ENST00000446182 F8W036 122 aa6.9□□□□□ -1.3
PTPRN-208ENST00000446182 APOC3P02656 99 aa6.9□□□□□ -1.3
PTPRN-208ENST00000446182 H2AFB1P0C5Y9 115 aa6.9□□□□□ -1.3
PTPRN-208ENST00000446182 ATP6V0CP27449 155 aa6.9□□□□□ -1.3
PTPRN-208ENST00000446182 KRTAP10-4P60372 401 aaPredicted RBP6.9□□□□□ -1.3
PTPRN-208ENST00000446182 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.3
PTPRN-208ENST00000446182 ACOT6Q3I5F7 207 aaPredicted RBP6.9□□□□□ -1.3
PTPRN-208ENST00000446182 LINC01620Q4KN68 170 aa6.9□□□□□ -1.3
PTPRN-208ENST00000446182 SCXQ7RTU7 201 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms