RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 ZNF705FA8MVS1 300 aaPredicted RBP6.76□□□□□ -1.33
LINC00642-203ENST00000444942 F6UB75 175 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 AMBPP02760 352 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 ID1P41134 155 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 RPS20P60866 119 aaKnown RBP6.76□□□□□ -1.33
LINC00642-203ENST00000444942 FAM162BQ5T6X4 162 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 GDF5OSQ5U4N7 250 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 Q6AWC8 147 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 RNF182Q8N6D2 247 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 Q8TAT8 98 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 GTSF1Q8WW33 167 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 BORCS7Q96B45 105 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 VGLL1Q99990 258 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 CSTL1Q9H114 145 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
LINC00642-203ENST00000444942 SOCS3O14543 225 aa6.75□□□□□ -1.33
LINC00642-203ENST00000444942 SPRY2O43597 315 aa6.75□□□□□ -1.33
LINC00642-203ENST00000444942 SH2D1AO60880 128 aa6.75□□□□□ -1.33
LINC00642-203ENST00000444942 ZNF705DP0CH99 300 aaPredicted RBP6.75□□□□□ -1.33
LINC00642-203ENST00000444942 ZNF705BP0CI00 300 aaPredicted RBP6.75□□□□□ -1.33
LINC00642-203ENST00000444942 CAMPP49913 170 aa6.75□□□□□ -1.33
LINC00642-203ENST00000444942 Q0VG73 95 aa6.75□□□□□ -1.33
LINC00642-203ENST00000444942 RIGQ13278 110 aa6.75□□□□□ -1.33
LINC00642-203ENST00000444942 OR10J3Q5JRS4 329 aa6.75□□□□□ -1.33
LINC00642-203ENST00000444942 TMEM78Q5T7P6 136 aa6.75□□□□□ -1.33
LINC00642-203ENST00000444942 BAGE3Q86Y29 109 aa6.75□□□□□ -1.33
LINC00642-203ENST00000444942 OVOL2Q9BRP0 275 aa6.75□□□□□ -1.33
LINC00642-203ENST00000444942 A0A1B0GW15 77 aa6.74□□□□□ -1.33
LINC00642-203ENST00000444942 PRAC2D3DTV9 90 aa6.74□□□□□ -1.33
LINC00642-203ENST00000444942 GZMBP10144 247 aa6.74□□□□□ -1.33
LINC00642-203ENST00000444942 SRIP30626 198 aa6.74□□□□□ -1.33
LINC00642-203ENST00000444942 CRIP1P50238 77 aa6.74□□□□□ -1.33
LINC00642-203ENST00000444942 ERCC8Q13216 396 aa6.74□□□□□ -1.33
LINC00642-203ENST00000444942 KIAA1644Q3SXP7 199 aa6.74□□□□□ -1.33
LINC00642-203ENST00000444942 SAMD13Q5VXD3 122 aa6.74□□□□□ -1.33
LINC00642-203ENST00000444942 TRPT1Q86TN4 253 aaKnown RBP6.74□□□□□ -1.33
LINC00642-203ENST00000444942 ZNF738Q8NE65 137 aa6.74□□□□□ -1.33
LINC00642-203ENST00000444942 NIT2Q9NQR4 276 aa6.74□□□□□ -1.33
LINC00642-203ENST00000444942 A0A1B0GUT8 65 aa6.73□□□□□ -1.33
LINC00642-203ENST00000444942 PCP4L1A6NKN8 68 aa6.73□□□□□ -1.33
LINC00642-203ENST00000444942 ESDP10768 282 aa6.73□□□□□ -1.33
LINC00642-203ENST00000444942 ZNF138P52744 262 aa6.73□□□□□ -1.33
LINC00642-203ENST00000444942 FOXA3P55318 350 aaPredicted RBP6.73□□□□□ -1.33
LINC00642-203ENST00000444942 SLAQ13239 276 aa6.73□□□□□ -1.33
LINC00642-203ENST00000444942 CEMP1Q6PRD7 247 aaPredicted RBP6.73□□□□□ -1.33
LINC00642-203ENST00000444942 Q8N1X5 172 aa6.73□□□□□ -1.33
LINC00642-203ENST00000444942 TMEM256Q8N2U0 113 aa6.73□□□□□ -1.33
LINC00642-203ENST00000444942 KIR2DL5BA0A0G2JN68 375 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 KIR2DL5BA0A0G2JPC4 375 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 FABP5P3A8MUU1 101 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 H3BMM0 161 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 DEFB4AO15263 64 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 SERF1AO75920 110 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 PYY3Q5JQD4 70 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 DNLZQ5SXM8 178 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 EBLN2Q6P2I7 272 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 C9orf47Q6ZRZ4 202 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 Q6ZWC4 215 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 KIR2DL5AQ8N109 375 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 KIR2DL5BQ8NHK3 375 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 SSBP4Q9BWG4 385 aaPredicted RBP6.72□□□□□ -1.33
LINC00642-203ENST00000444942 AGPAT4-IT1Q9H0P7 198 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 XCL2Q9UBD3 114 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 TP53TG3Q9ULZ0 132 aa6.72□□□□□ -1.33
LINC00642-203ENST00000444942 TMSB15BA0A087X1C1 80 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 A0A0J9YWU9 116 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 CDK2AP2O75956 126 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 ARMS2P0C7Q2 107 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 HLA-DRB4P13762 266 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 ZNF80P51504 273 aaPredicted RBP6.71□□□□□ -1.33
LINC00642-203ENST00000444942 S100A12P80511 92 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 HIST1H1AQ02539 215 aaPredicted RBP6.71□□□□□ -1.33
LINC00642-203ENST00000444942 ZNF575Q86XF7 245 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 GATD1Q8NB37 220 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 OR10J6PQ8NGY7 276 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 OR11H2Q8NH07 326 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 RNF183Q96D59 192 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 KCNS1Q96KK3 526 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 TPPP3Q9BW30 176 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 SAMD10Q9BYL1 202 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 PPP1R14DQ9NXH3 145 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 KLK5Q9Y337 293 aaPredicted RBP6.71□□□□□ -1.33
LINC00642-203ENST00000444942 LENEPQ9Y5L5 61 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 HLA-DRB4X5D2U9 266 aa6.71□□□□□ -1.33
LINC00642-203ENST00000444942 IGHV3OR16-12A0A075B7B8 117 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 A0A0J9YX75 114 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 F2Z2F3 143 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 ORM1P02763 201 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 GIG44P09565 113 aaPredicted RBP6.7□□□□□ -1.34
LINC00642-203ENST00000444942 CTRLP40313 264 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 LINC00310P59036 64 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 JOSD1Q15040 202 aaPredicted RBP6.7□□□□□ -1.34
LINC00642-203ENST00000444942 LINC01559Q495D7 138 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 MORN3Q6PF18 240 aaPredicted RBP6.7□□□□□ -1.34
LINC00642-203ENST00000444942 LYZL1Q6UWQ5 148 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 FOXI2Q6ZQN5 318 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 FER1L6-AS1Q8NA97 138 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 C18orf32Q8TCD1 76 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 LINC00477Q96M19 166 aa6.7□□□□□ -1.34
LINC00642-203ENST00000444942 ALKBH7Q9BT30 221 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms