RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 ZNF714Q96N38 554 aa2.63□□□□□ -1.99
UBR3-206ENST00000444475 OR8B2Q96RD0 313 aa2.63□□□□□ -1.99
UBR3-206ENST00000444475 DEC1Q9P2X7 70 aa2.63□□□□□ -1.99
UBR3-206ENST00000444475 LYZP61626 148 aa2.63□□□□□ -1.99
UBR3-206ENST00000444475 FAM72AQ5TYM5 149 aa2.63□□□□□ -1.99
UBR3-206ENST00000444475 TREML4Q6UXN2 200 aa2.63□□□□□ -1.99
UBR3-206ENST00000444475 CEND1Q8N111 149 aa2.63□□□□□ -1.99
UBR3-206ENST00000444475 RPS10P5Q9NQ39 176 aa2.63□□□□□ -1.99
UBR3-206ENST00000444475 BDP1A6H8Y1 2624 aa2.63□□□□□ -1.99
UBR3-206ENST00000444475 IGHV3-15A0A0B4J1V0 119 aa2.63□□□□□ -1.99
UBR3-206ENST00000444475 LSM3P62310 102 aaKnown RBP2.63□□□□□ -1.99
UBR3-206ENST00000444475 MIAQ16674 131 aa2.63□□□□□ -1.99
UBR3-206ENST00000444475 PLXNA1Q9UIW2 1896 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 ZNF407Q9C0G0 2248 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 CEP290O15078 2479 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 A8MUU9 505 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 ZNF736B4DX44 427 aaPredicted RBP2.62□□□□□ -1.99
UBR3-206ENST00000444475 CPSF4O95639 269 aaKnown RBP2.62□□□□□ -1.99
UBR3-206ENST00000444475 MPV17P39210 176 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 SUPT4H1P63272 117 aaKnown RBP2.62□□□□□ -1.99
UBR3-206ENST00000444475 SERP2Q8N6R1 65 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 HIGD1BQ9P298 99 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 DOCK7Q96N67 2140 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 UNC79Q9P2D8 2635 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 H3BUT2 72 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 LY6HO94772 140 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 IGHV1-69P01742 117 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 LINC00269Q8N2A0 174 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 TMEM256Q8N2U0 113 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 FAM19A2Q8N3H0 131 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 C1orf64Q8NEQ6 169 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 MRPL35Q9NZE8 188 aaKnown RBP2.62□□□□□ -1.99
UBR3-206ENST00000444475 NOTCH4Q99466 2003 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 EML5Q05BV3 1969 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 PDCD11Q14690 1871 aaKnown RBP2.62□□□□□ -1.99
UBR3-206ENST00000444475 EXPH5Q8NEV8 1989 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 A0A1B0GUV1 79 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 IGHV1-46P01743 117 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 TRGV3P03979 118 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 SFTA3P0C7M3 94 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 RHOHQ15669 191 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 Q6ZR54 194 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 Q6ZTC4 211 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 CHCHD1Q96BP2 118 aaKnown RBP2.62□□□□□ -1.99
UBR3-206ENST00000444475 TRGV9Q99603 122 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 FGF22Q9HCT0 170 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 ZFHX3Q15911 3703 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 MYO16Q9Y6X6 1858 aa2.62□□□□□ -1.99
UBR3-206ENST00000444475 SLC25A16P16260 332 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 SYCNQ0VAF6 134 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 SCRT1Q9BWW7 348 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 SVILO95425 2214 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 KIAA1549Q9HCM3 1950 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 ATRXP46100 2492 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 IGLV11-55A0A075B6I3 123 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 H3BMM0 161 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 PEBP1P30086 187 aaKnown RBP2.61□□□□□ -1.99
UBR3-206ENST00000444475 UBE2WQ96B02 151 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 GREB1Q4ZG55 1949 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 FAM208BQ5VWN6 2430 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 PIKFYVEQ9Y2I7 2098 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 TRIP12Q14669 1992 aaPredicted RBP2.61□□□□□ -1.99
UBR3-206ENST00000444475 LCTP09848 1927 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 IGKV1OR2-108A0A075B7D4 117 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 IGHV3-64DA0A0J9YX35 117 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 TMEM223A0PJW6 202 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 C16orf90A8MZG2 172 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 H7BZZ5 65 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 EFNA4P52798 201 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 PMCHL1Q16048 86 aa2.61□□□□□ -1.99
UBR3-206ENST00000444475 NCOR1O75376 2440 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 ASH1LQ9NR48 2969 aaKnown RBP2.6□□□□□ -1.99
UBR3-206ENST00000444475 IGKV1D-37A0A075B6S9 117 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 PIRTP0C851 137 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 SPTSSAQ969W0 71 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 SLC50A1Q9BRV3 221 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 GABARAPL1Q9H0R8 117 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 ANKRD12Q6UB98 2062 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 IGKV2D-26A0A0A0MRZ7 120 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 TCRBV4S1A1TA0A5B7 111 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 PCNX2A6NKB5 2137 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 J3QLW9 94 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 NPYP01303 97 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 CKS2P33552 79 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 FAUP35544 74 aaKnown RBP2.6□□□□□ -1.99
UBR3-206ENST00000444475 ZNF345Q14585 488 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 FAM229BQ4G0N7 80 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 SMAD5-AS1Q9Y6J3 95 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 IGHV1-3A0A0C4DH29 117 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 RPL28P46779 137 aaKnown RBP2.6□□□□□ -1.99
UBR3-206ENST00000444475 XCL1P47992 114 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 MPV17LQ2QL34 196 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 FAM213BQ8TBF2 198 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 RETNLBQ9BQ08 111 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 PLXNB2O15031 1838 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 THADAQ6YHU6 1953 aa2.6□□□□□ -1.99
UBR3-206ENST00000444475 TDRD6O60522 2096 aaKnown RBP2.6□□□□□ -1.99
UBR3-206ENST00000444475 GPR179Q6PRD1 2367 aa2.59□□□□□ -1.99
UBR3-206ENST00000444475 C17orf98A8MV24 154 aa2.59□□□□□ -1.99
UBR3-206ENST00000444475 SOCS2O14508 198 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms