RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 TMEM254Q8TBM7 123 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 SAP25Q8TEE9 199 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 SPRR3Q9UBC9 169 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 MYOFQ9NZM1 2061 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.29□□□□□ -1.72
PTPRC-209ENST00000442510 IGHV3-20A0A0C4DH32 117 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 PRR4Q16378 134 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 FHL5Q5TD97 284 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 KCPQ6ZWJ8 1503 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 PLXNB1O43157 2135 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 SPTBN1Q01082 2364 aaKnown RBP4.29□□□□□ -1.72
PTPRC-209ENST00000442510 DENND4CQ5VZ89 1909 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 CUL9Q8IWT3 2517 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 RGPD3A6NKT7 1758 aaPredicted RBP4.28□□□□□ -1.72
PTPRC-209ENST00000442510 BCORQ6W2J9 1755 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 RGPD4Q7Z3J3 1758 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV3-7A0A075B6H7 116 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 TMEM92Q6UXU6 159 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 NRACQ8N912 160 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 RETNLBQ9BQ08 111 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 HCG22E2RYF7 251 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 SPRY3O43610 288 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 BCE1O60756 84 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 Q6ZSR3 168 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 LTBP4Q8N2S1 1624 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 K7ENP7 123 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 POM121L12Q8N7R1 296 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 CNEP1R1Q8N9A8 125 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 CCL13Q99616 98 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 SORL1Q92673 2214 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 C19orf71A6NCJ1 209 aa4.28□□□□□ -1.72
PTPRC-209ENST00000442510 A0A0J9YXY3 114 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 DOCK4Q8N1I0 1966 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 IGKV1-6A0A0C4DH72 117 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 ABCA1O95477 2261 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 QSER1Q2KHR3 1735 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 FRMPD3Q5JV73 1810 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 FOCADQ5VW36 1801 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 ODF3L1Q8IXM7 274 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 TNCP24821 2201 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 LOC285556D6RIA3 1793 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 TJP1Q07157 1748 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 NCR3O14931 201 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 RSPO4Q2I0M5 234 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-209ENST00000442510 TMEM30BQ3MIR4 351 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 ATP11AUNQ6ZP68 121 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 Q9H8V8 135 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 PROK2Q9HC23 129 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 MAST2Q6P0Q8 1798 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 MLANAQ16655 118 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 DCTN5Q9BTE1 182 aa4.27□□□□□ -1.73
PTPRC-209ENST00000442510 SIPA1L3O60292 1781 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-209ENST00000442510 IGKV1-27A0A075B6S5 117 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 INSP01308 110 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 RNASE4P34096 147 aaKnown RBP4.26□□□□□ -1.73
PTPRC-209ENST00000442510 LINC00473A8K010 186 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 H3BQ85 93 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 HILS1P60008 231 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 NCOA6Q14686 2063 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-209ENST00000442510 EML6Q6ZMW3 1958 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 C5orf67F2Z3F1 127 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 NHSL1Q5SYE7 1610 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 A0A0J9YXV3 536 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 SND1-IT1Q9HBX3 110 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 KMT2EQ8IZD2 1858 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 SBF2Q86WG5 1849 aa4.26□□□□□ -1.73
PTPRC-209ENST00000442510 LINC01548A6NM66 108 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 BPY2O14599 106 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 ZNF71Q9NQZ8 489 aaPredicted RBP4.25□□□□□ -1.73
PTPRC-209ENST00000442510 IGHV1-3A0A0C4DH29 117 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 K7EMT4 169 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 FHL1Q13642 323 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 SHANK3Q9BYB0 1731 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 COL11A1P12107 1806 aaPredicted RBP4.25□□□□□ -1.73
PTPRC-209ENST00000442510 C8orf87E5RJ46 101 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 C15orf32Q32M92 178 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 DEFB119Q8N690 84 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 ZNRF1Q8ND25 227 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
PTPRC-209ENST00000442510 FGF22Q9HCT0 170 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 MSRB1Q9NZV6 116 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 TRBV10-3A0A0K0K1G6 114 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 COL8A2P25067 703 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 CCL14Q16627 93 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 C6orf99Q4VX62 202 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 C11orf53Q8IXP5 236 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 COX7B2Q8TF08 81 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 ZFAND3Q9H8U3 227 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 PKD1L3Q7Z443 1732 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 KDM3BQ7LBC6 1761 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 IGHV3-72A0A0B4J1Y9 119 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 CXorf51AA0A1B0GTR3 108 aa4.25□□□□□ -1.73
PTPRC-209ENST00000442510 COL24A1Q17RW2 1714 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 IGHV3-30-3P0DP02 117 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 BSPH1Q075Z2 132 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 DEFB112Q30KQ8 113 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 Q6ZS46 218 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 IGKV1-8A0A0C4DH67 115 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 SAA2P0DJI9 122 aaPredicted RBP4.24□□□□□ -1.73
PTPRC-209ENST00000442510 C16orf47Q6ZP98 133 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms