RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 LYRM7Q5U5X0 104 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 C2orf66Q6UXQ4 117 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 GATD1Q8NB37 220 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 IGKV3D-20A0A0C4DH25 116 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 J3QLI3 93 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 K7EM74 188 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 DUSP14O95147 198 aaKnown RBP5.8□□□□□ -1.48
HDAC9-214ENST00000441542 IGLV1-44P01699 117 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 CFC1BP0CG36 223 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 CFC1P0CG37 223 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 HERVK_113P61574 105 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 ZNF474Q6S9Z5 364 aaPredicted RBP5.8□□□□□ -1.48
HDAC9-214ENST00000441542 ATP6V0E2Q8NHE4 81 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 RASL10AQ92737 203 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 C11orf86A6NJI1 115 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 ELANEP08246 267 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 Q8N1Y9 231 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 FDCSPQ8NFU4 85 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 DUX3Q96PT4 197 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 DYNLRB1Q9NP97 96 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 CREBBPQ92793 2442 aa5.8□□□□□ -1.48
HDAC9-214ENST00000441542 COL6A6A6NMZ7 2263 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 IGHV1-3A0A0C4DH29 117 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 SHISA9B4DS77 424 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 F5H697 171 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 RHODO00212 210 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 TIMM23O14925 209 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 IGF1P05019 195 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 CACNA1AO00555 2505 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 AKAP13Q12802 2813 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 CENPVL3A0A0U1RRI6 287 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 IGHV1-8P0DP01 117 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 RPL39P62891 51 aaKnown RBP5.79□□□□□ -1.48
HDAC9-214ENST00000441542 NDPQ00604 133 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 BAALCQ8WXS3 180 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 SMIM2Q9BVW6 85 aa5.79□□□□□ -1.48
HDAC9-214ENST00000441542 FOXC1Q12948 553 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 TEX36Q5VZQ5 186 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 NRACQ8N912 160 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 DNAJC30Q96LL9 226 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 OPRPNQ99935 248 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-214ENST00000441542 PRO1854Q9UHT4 67 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 IGLV2-18A0A075B6J9 118 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 TRAV12-3A0A0B4J271 114 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 LOC107984640A0A0U1RRK4 108 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 LOXP28300 417 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-214ENST00000441542 NBL1P41271 181 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 TSPEAR-AS2P59090 65 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 DGAT2L7PQ6IED9 249 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 PIFOQ8TCI5 191 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 KLK5Q9Y337 293 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-214ENST00000441542 DOPEY2Q9Y3R5 2298 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 UBE2D1P51668 147 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 PVRIGQ6DKI7 326 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 C10orf126Q8N4M7 172 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 FAM57AQ8TBR7 257 aa5.78□□□□□ -1.48
HDAC9-214ENST00000441542 RAI1Q7Z5J4 1906 aaPredicted RBP5.77□□□□□ -1.49
HDAC9-214ENST00000441542 NOTCH3Q9UM47 2321 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 INS-IGF2F8WCM5 200 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 MRPS12O15235 138 aaKnown RBP5.77□□□□□ -1.49
HDAC9-214ENST00000441542 CD7P09564 240 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 LGALS3P17931 250 aaKnown RBP5.77□□□□□ -1.49
HDAC9-214ENST00000441542 UBE2D3P61077 147 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 UBE2D2P62837 147 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 RPL11P62913 178 aaKnown RBP5.77□□□□□ -1.49
HDAC9-214ENST00000441542 ADORA2A-AS1P86434 159 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 Q6ZSV7 163 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 LYPD1Q8N2G4 141 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 AGPAT4-IT1Q9H0P7 198 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 C21orf62Q9NYP8 219 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 ZNF256Q9Y2P7 627 aaPredicted RBP5.77□□□□□ -1.49
HDAC9-214ENST00000441542 A0A0J9YY99 117 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 SUMO2P61956 95 aaKnown RBP5.77□□□□□ -1.49
HDAC9-214ENST00000441542 ECSCRQ19T08 205 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 PSMG4Q5JS54 123 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 KHDC1LQ5JSQ8 128 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 C2orf82Q6UX34 121 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 LINC00527Q9UJ94 153 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 TP53TG1Q9Y2A0 90 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 SMAD5-AS1Q9Y6J3 95 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 SVEP1Q4LDE5 3571 aa5.77□□□□□ -1.49
HDAC9-214ENST00000441542 SPTAN1Q13813 2472 aaKnown RBP5.77□□□□□ -1.49
HDAC9-214ENST00000441542 LY6HO94772 140 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 THBDP07204 575 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 FAM74A4Q5TZK3 123 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 OR13C6PQ8NH95 151 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 TIMD4Q96H15 378 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 TMEM126AQ9H061 195 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 ATRXP46100 2492 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 FASNP49327 2511 aaKnown RBP5.76□□□□□ -1.49
HDAC9-214ENST00000441542 IGLV3-9A0A075B6K5 115 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 TRBV6-1A0A0K0K1D8 114 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 ZNF575Q86XF7 245 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 DEFB124Q8NES8 71 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 PHLDA3Q9Y5J5 127 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 A0A087WWL8 130 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 C17orf100A8MU93 164 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 NEXN-AS1Q8NBZ9 246 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 CLEC2BQ92478 149 aa5.76□□□□□ -1.49
HDAC9-214ENST00000441542 ZNF580Q9UK33 172 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms