RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 B4DEV8 164 aa11.14□□□□□ -0.63
ITGB1-207ENST00000439974 IFNA1P01562 189 aa11.14□□□□□ -0.63
ITGB1-207ENST00000439974 TNP2Q05952 138 aa11.14□□□□□ -0.63
ITGB1-207ENST00000439974 FAM162BQ5T6X4 162 aa11.14□□□□□ -0.63
ITGB1-207ENST00000439974 BAGE2Q86Y30 109 aa11.14□□□□□ -0.63
ITGB1-207ENST00000439974 ZNF479Q96JC4 524 aa11.14□□□□□ -0.63
ITGB1-207ENST00000439974 SPXQ9BT56 116 aa11.14□□□□□ -0.63
ITGB1-207ENST00000439974 DNAH5Q8TE73 4624 aa11.14□□□□□ -0.63
ITGB1-207ENST00000439974 M0R2P5 195 aa11.13□□□□□ -0.63
ITGB1-207ENST00000439974 RNASE3P12724 160 aaKnown RBP11.13□□□□□ -0.63
ITGB1-207ENST00000439974 MEF2BQ02080 365 aaPredicted RBP11.13□□□□□ -0.63
ITGB1-207ENST00000439974 PRR27Q6MZM9 219 aa11.13□□□□□ -0.63
ITGB1-207ENST00000439974 KRBOX1C9JBD0 128 aa11.12□□□□□ -0.63
ITGB1-207ENST00000439974 BLOC1S1P78537 153 aa11.12□□□□□ -0.63
ITGB1-207ENST00000439974 RPL19P84098 196 aaKnown RBP11.12□□□□□ -0.63
ITGB1-207ENST00000439974 ZNF674Q2M3X9 581 aa11.12□□□□□ -0.63
ITGB1-207ENST00000439974 COX8CQ7Z4L0 72 aa11.12□□□□□ -0.63
ITGB1-207ENST00000439974 RASL10AQ92737 203 aa11.12□□□□□ -0.63
ITGB1-207ENST00000439974 C11orf52Q96A22 123 aa11.12□□□□□ -0.63
ITGB1-207ENST00000439974 VSIG2Q96IQ7 327 aa11.12□□□□□ -0.63
ITGB1-207ENST00000439974 C9orf85Q96MD7 179 aa11.12□□□□□ -0.63
ITGB1-207ENST00000439974 MED9Q9NWA0 146 aa11.12□□□□□ -0.63
ITGB1-207ENST00000439974 VAX2Q9UIW0 290 aa11.12□□□□□ -0.63
ITGB1-207ENST00000439974 APOBP04114 4563 aaKnown RBP11.11□□□□□ -0.63
ITGB1-207ENST00000439974 PGPEP1LA6NFU8 196 aa11.11□□□□□ -0.63
ITGB1-207ENST00000439974 H3BVH4 76 aa11.11□□□□□ -0.63
ITGB1-207ENST00000439974 S100A9P06702 114 aaKnown RBP11.11□□□□□ -0.63
ITGB1-207ENST00000439974 S100A4P26447 101 aaKnown RBP11.11□□□□□ -0.63
ITGB1-207ENST00000439974 FHL2Q14192 279 aa11.11□□□□□ -0.63
ITGB1-207ENST00000439974 CENPWQ5EE01 88 aa11.11□□□□□ -0.63
ITGB1-207ENST00000439974 C18orf15Q96N68 181 aa11.11□□□□□ -0.63
ITGB1-207ENST00000439974 Q9H8V8 135 aa11.11□□□□□ -0.63
ITGB1-207ENST00000439974 IGHV3-73A0A0B4J1V6 119 aa11.1□□□□□ -0.63
ITGB1-207ENST00000439974 C16orf90A8MZG2 172 aa11.1□□□□□ -0.63
ITGB1-207ENST00000439974 H3BNG1 76 aa11.1□□□□□ -0.63
ITGB1-207ENST00000439974 ASIPP42127 132 aa11.1□□□□□ -0.63
ITGB1-207ENST00000439974 ZNF876PQ49A33 203 aa11.1□□□□□ -0.63
ITGB1-207ENST00000439974 TTC32Q5I0X7 151 aa11.1□□□□□ -0.63
ITGB1-207ENST00000439974 ZNF506Q5JVG8 444 aa11.1□□□□□ -0.63
ITGB1-207ENST00000439974 OR4C5Q8NGB2 326 aa11.1□□□□□ -0.63
ITGB1-207ENST00000439974 MLST8Q9BVC4 326 aa11.1□□□□□ -0.63
ITGB1-207ENST00000439974 TRGV4A0A0C4DH28 118 aa11.09□□□□□ -0.63
ITGB1-207ENST00000439974 IGLV2-8P01709 118 aa11.09□□□□□ -0.63
ITGB1-207ENST00000439974 MGST1P10620 155 aaKnown RBP11.09□□□□□ -0.63
ITGB1-207ENST00000439974 UPK3BQ9BT76 320 aa11.09□□□□□ -0.63
ITGB1-207ENST00000439974 A0A096LPF7 62 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 TRAV4A0A0B4J268 109 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 RBFOX3A6NFN3 312 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 PAX4O43316 350 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 PDE6DO43924 150 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 ARMS2P0C7Q2 107 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 LINC01559Q495D7 138 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 TOR2AQ5JU69 321 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 LYPD6BQ8NI32 183 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 TXNDC17Q9BRA2 123 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 JPT2Q9H910 190 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 HHLA3Q9XRX5 114 aa11.08□□□□□ -0.64
ITGB1-207ENST00000439974 TRBV20OR9-2A0A075B6H5 130 aa11.07□□□□□ -0.64
ITGB1-207ENST00000439974 GNG4P50150 75 aa11.07□□□□□ -0.64
ITGB1-207ENST00000439974 CEBPGP53567 150 aa11.07□□□□□ -0.64
ITGB1-207ENST00000439974 CRYBA4P53673 196 aa11.07□□□□□ -0.64
ITGB1-207ENST00000439974 ESRGQ1W209 222 aa11.07□□□□□ -0.64
ITGB1-207ENST00000439974 MRPS16Q9Y3D3 137 aaKnown RBP11.07□□□□□ -0.64
ITGB1-207ENST00000439974 MUC21A0A0G2JKD1 596 aa11.06□□□□□ -0.64
ITGB1-207ENST00000439974 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
ITGB1-207ENST00000439974 MUC21A0A140T8X8 626 aa11.06□□□□□ -0.64
ITGB1-207ENST00000439974 A0A1W2PPQ1 181 aa11.06□□□□□ -0.64
ITGB1-207ENST00000439974 CFAP126Q5VTH2 177 aa11.06□□□□□ -0.64
ITGB1-207ENST00000439974 TEX261Q6UWH6 196 aa11.06□□□□□ -0.64
ITGB1-207ENST00000439974 KRTAP1-5Q9BYS1 174 aa11.06□□□□□ -0.64
ITGB1-207ENST00000439974 PRO0255Q9UI72 69 aa11.06□□□□□ -0.64
ITGB1-207ENST00000439974 RS1O15537 224 aa11.05□□□□□ -0.64
ITGB1-207ENST00000439974 SSTP61278 116 aa11.05□□□□□ -0.64
ITGB1-207ENST00000439974 DMRTA1Q5VZB9 504 aa11.05□□□□□ -0.64
ITGB1-207ENST00000439974 EIF5A2Q9GZV4 153 aaKnown RBP11.05□□□□□ -0.64
ITGB1-207ENST00000439974 IL36BQ9NZH7 164 aa11.05□□□□□ -0.64
ITGB1-207ENST00000439974 M0R381 172 aa11.04□□□□□ -0.64
ITGB1-207ENST00000439974 CDK2AP2O75956 126 aa11.04□□□□□ -0.64
ITGB1-207ENST00000439974 GZMBP10144 247 aa11.04□□□□□ -0.64
ITGB1-207ENST00000439974 TAGLN2P37802 199 aaKnown RBP11.04□□□□□ -0.64
ITGB1-207ENST00000439974 SAMD10Q9BYL1 202 aa11.04□□□□□ -0.64
ITGB1-207ENST00000439974 GYPEP15421 78 aa11.03□□□□□ -0.64
ITGB1-207ENST00000439974 BTF3P20290 206 aaKnown RBP11.03□□□□□ -0.64
ITGB1-207ENST00000439974 Q6ZSN1 163 aa11.03□□□□□ -0.64
ITGB1-207ENST00000439974 PARLQ9H300 379 aa11.03□□□□□ -0.64
ITGB1-207ENST00000439974 ICOSQ9Y6W8 199 aa11.03□□□□□ -0.64
ITGB1-207ENST00000439974 GATA1P15976 413 aaPredicted RBP11.02□□□□□ -0.65
ITGB1-207ENST00000439974 DNLZQ5SXM8 178 aa11.02□□□□□ -0.65
ITGB1-207ENST00000439974 SPATA12Q7Z6I5 190 aa11.02□□□□□ -0.65
ITGB1-207ENST00000439974 FAM210AQ96ND0 272 aa11.02□□□□□ -0.65
ITGB1-207ENST00000439974 KRTAP4-5Q9BYR2 181 aa11.02□□□□□ -0.65
ITGB1-207ENST00000439974 PHLDA3Q9Y5J5 127 aa11.02□□□□□ -0.65
ITGB1-207ENST00000439974 A0A087WWL8 130 aa11.01□□□□□ -0.65
ITGB1-207ENST00000439974 C19orf71A6NCJ1 209 aa11.01□□□□□ -0.65
ITGB1-207ENST00000439974 K7EN84 100 aa11.01□□□□□ -0.65
ITGB1-207ENST00000439974 K7EQD1 137 aa11.01□□□□□ -0.65
ITGB1-207ENST00000439974 SLAQ13239 276 aa11.01□□□□□ -0.65
ITGB1-207ENST00000439974 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
ITGB1-207ENST00000439974 OR10AG1Q8NH19 301 aa11.01□□□□□ -0.65
ITGB1-207ENST00000439974 OCC1Q8TAD7 63 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms