RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 A0A087WWL8 130 aa11.19□□□□□ -0.62
CPSF7-205ENST00000439958 Q0VG73 95 aa11.19□□□□□ -0.62
CPSF7-205ENST00000439958 COA6Q5JTJ3 125 aaKnown RBP11.19□□□□□ -0.62
CPSF7-205ENST00000439958 PRO1933Q9H354 126 aa11.18□□□□□ -0.62
CPSF7-205ENST00000439958 ZNF324O75467 553 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-205ENST00000439958 DMRTA1Q5VZB9 504 aa11.18□□□□□ -0.62
CPSF7-205ENST00000439958 COX8CQ7Z4L0 72 aa11.18□□□□□ -0.62
CPSF7-205ENST00000439958 SPAG8Q99932 426 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-205ENST00000439958 MDFICQ9P1T7 246 aa11.18□□□□□ -0.62
CPSF7-205ENST00000439958 SMIM17P0DL12 118 aa11.18□□□□□ -0.62
CPSF7-205ENST00000439958 IFI27P40305 119 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-205ENST00000439958 LINC01587Q99440 93 aa11.18□□□□□ -0.62
CPSF7-205ENST00000439958 JPT2Q9H910 190 aa11.18□□□□□ -0.62
CPSF7-205ENST00000439958 A0A1B0GW15 77 aa11.17□□□□□ -0.62
CPSF7-205ENST00000439958 NDUFA7O95182 113 aa11.17□□□□□ -0.62
CPSF7-205ENST00000439958 Q8N1Y9 231 aa11.17□□□□□ -0.62
CPSF7-205ENST00000439958 H3BMM0 161 aa11.17□□□□□ -0.62
CPSF7-205ENST00000439958 NPYP01303 97 aa11.17□□□□□ -0.62
CPSF7-205ENST00000439958 FHL3Q13643 280 aa11.17□□□□□ -0.62
CPSF7-205ENST00000439958 ATOH7Q8N100 152 aa11.17□□□□□ -0.62
CPSF7-205ENST00000439958 LINC00614P0C842 121 aa11.16□□□□□ -0.62
CPSF7-205ENST00000439958 Q6ZWC4 215 aa11.16□□□□□ -0.62
CPSF7-205ENST00000439958 ZNF575Q86XF7 245 aa11.16□□□□□ -0.62
CPSF7-205ENST00000439958 IGHV3-73A0A0B4J1V6 119 aa11.16□□□□□ -0.62
CPSF7-205ENST00000439958 S100A12P80511 92 aa11.16□□□□□ -0.62
CPSF7-205ENST00000439958 ODF3L2Q3SX64 289 aa11.16□□□□□ -0.62
CPSF7-205ENST00000439958 MCRIP2Q9BUT9 160 aaKnown RBP11.16□□□□□ -0.62
CPSF7-205ENST00000439958 CYSRT1A8MQ03 144 aa11.15□□□□□ -0.62
CPSF7-205ENST00000439958 KLLNB2CW77 178 aa11.15□□□□□ -0.62
CPSF7-205ENST00000439958 FOSL1P15407 271 aa11.15□□□□□ -0.62
CPSF7-205ENST00000439958 AP5S1Q9NUS5 200 aa11.15□□□□□ -0.62
CPSF7-205ENST00000439958 HLA-DRB4P13762 266 aa11.15□□□□□ -0.62
CPSF7-205ENST00000439958 HLA-DRB4X5D2U9 266 aa11.15□□□□□ -0.62
CPSF7-205ENST00000439958 IGHV1OR15-1A0A075B7D0 117 aa11.14□□□□□ -0.63
CPSF7-205ENST00000439958 RAB4AP20338 218 aa11.14□□□□□ -0.63
CPSF7-205ENST00000439958 TMEM191AQ9H0A3 160 aa11.14□□□□□ -0.63
CPSF7-205ENST00000439958 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
CPSF7-205ENST00000439958 ZNF256Q9Y2P7 627 aaPredicted RBP11.14□□□□□ -0.63
CPSF7-205ENST00000439958 RBMY1BA6NDE4 496 aaKnown RBP11.13□□□□□ -0.63
CPSF7-205ENST00000439958 RBMY1EA6NEQ0 496 aaKnown RBP11.13□□□□□ -0.63
CPSF7-205ENST00000439958 RBMY1DP0C7P1 496 aaKnown RBP11.13□□□□□ -0.63
CPSF7-205ENST00000439958 RNASE3P12724 160 aaKnown RBP11.13□□□□□ -0.63
CPSF7-205ENST00000439958 PMCHL2Q9BQD1 86 aa11.13□□□□□ -0.63
CPSF7-205ENST00000439958 OR5AL1P0C617 328 aa11.13□□□□□ -0.63
CPSF7-205ENST00000439958 NDUFA11Q86Y39 141 aa11.13□□□□□ -0.63
CPSF7-205ENST00000439958 SPATA3Q8NHX4 192 aa11.13□□□□□ -0.63
CPSF7-205ENST00000439958 NOTCH1P46531 2555 aa11.13□□□□□ -0.63
CPSF7-205ENST00000439958 LEPROTL1O95214 131 aa11.12□□□□□ -0.63
CPSF7-205ENST00000439958 ZNF56Q15929 161 aa11.12□□□□□ -0.63
CPSF7-205ENST00000439958 ZNF876PQ49A33 203 aa11.12□□□□□ -0.63
CPSF7-205ENST00000439958 C18orf15Q96N68 181 aa11.12□□□□□ -0.63
CPSF7-205ENST00000439958 AP1S3Q96PC3 154 aa11.12□□□□□ -0.63
CPSF7-205ENST00000439958 MUC4Q99102 2169 aa11.12□□□□□ -0.63
CPSF7-205ENST00000439958 LINC00173Q6ZV60 143 aa11.12□□□□□ -0.63
CPSF7-205ENST00000439958 MAP1LC3AQ9H492 121 aa11.12□□□□□ -0.63
CPSF7-205ENST00000439958 SIGLEC8Q9NYZ4 499 aa11.12□□□□□ -0.63
CPSF7-205ENST00000439958 TRRAPQ9Y4A5 3859 aa11.12□□□□□ -0.63
CPSF7-205ENST00000439958 FAM19A4Q96LR4 140 aa11.12□□□□□ -0.63
CPSF7-205ENST00000439958 TNFRSF6BO95407 300 aa11.11□□□□□ -0.63
CPSF7-205ENST00000439958 RBMY1A1P0DJD3 496 aaKnown RBP11.11□□□□□ -0.63
CPSF7-205ENST00000439958 RBMY1CP0DJD4 496 aa11.11□□□□□ -0.63
CPSF7-205ENST00000439958 CACNG7P62955 275 aa11.11□□□□□ -0.63
CPSF7-205ENST00000439958 RBMY1FQ15415 496 aaKnown RBP11.11□□□□□ -0.63
CPSF7-205ENST00000439958 PAM16Q9Y3D7 125 aa11.11□□□□□ -0.63
CPSF7-205ENST00000439958 IGHV1-24A0A0C4DH33 117 aa11.11□□□□□ -0.63
CPSF7-205ENST00000439958 JOSD1Q15040 202 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-205ENST00000439958 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
CPSF7-205ENST00000439958 ZNF493Q6ZR52 646 aa11.11□□□□□ -0.63
CPSF7-205ENST00000439958 GSN-AS1Q9NRJ2 163 aa11.11□□□□□ -0.63
CPSF7-205ENST00000439958 EMP1P54849 157 aa11.1□□□□□ -0.63
CPSF7-205ENST00000439958 TCTAP57738 103 aa11.1□□□□□ -0.63
CPSF7-205ENST00000439958 NEGR1Q7Z3B1 354 aa11.1□□□□□ -0.63
CPSF7-205ENST00000439958 NUTF2P61970 127 aaKnown RBP11.1□□□□□ -0.63
CPSF7-205ENST00000439958 RNF185Q96GF1 192 aa11.1□□□□□ -0.63
CPSF7-205ENST00000439958 URB1-AS1Q96HZ7 61 aa11.1□□□□□ -0.63
CPSF7-205ENST00000439958 BTF3P20290 206 aaKnown RBP11.1□□□□□ -0.63
CPSF7-205ENST00000439958 RPL39LQ96EH5 51 aaKnown RBP11.1□□□□□ -0.63
CPSF7-205ENST00000439958 TCAPO15273 167 aa11.09□□□□□ -0.63
CPSF7-205ENST00000439958 INSP01308 110 aa11.09□□□□□ -0.63
CPSF7-205ENST00000439958 C3orf79P0CE67 100 aa11.09□□□□□ -0.63
CPSF7-205ENST00000439958 DEFB125Q8N687 156 aa11.09□□□□□ -0.63
CPSF7-205ENST00000439958 DPH3P1Q9H4G8 78 aa11.09□□□□□ -0.63
CPSF7-205ENST00000439958 OR2K2Q8NGT1 345 aa11.08□□□□□ -0.64
CPSF7-205ENST00000439958 TRBV7-9A0A0J9YWB2 115 aa11.08□□□□□ -0.64
CPSF7-205ENST00000439958 SNAI2O43623 268 aa11.08□□□□□ -0.64
CPSF7-205ENST00000439958 SYT8Q8NBV8 401 aa11.08□□□□□ -0.64
CPSF7-205ENST00000439958 IGHV3-16A0A0C4DH30 117 aa11.08□□□□□ -0.64
CPSF7-205ENST00000439958 CRXO43186 299 aaPredicted RBP11.08□□□□□ -0.64
CPSF7-205ENST00000439958 TRAV25A0A0B4J276 109 aa11.07□□□□□ -0.64
CPSF7-205ENST00000439958 IGLV1-51P01701 117 aa11.07□□□□□ -0.64
CPSF7-205ENST00000439958 CNFNQ9BYD5 112 aa11.07□□□□□ -0.64
CPSF7-205ENST00000439958 TDRG1Q3Y452 100 aa11.07□□□□□ -0.64
CPSF7-205ENST00000439958 C3orf56Q8N813 242 aa11.07□□□□□ -0.64
CPSF7-205ENST00000439958 TRGV11A0A075B6L2 103 aa11.06□□□□□ -0.64
CPSF7-205ENST00000439958 GTSCR1Q86UQ5 136 aa11.06□□□□□ -0.64
CPSF7-205ENST00000439958 MRPL16Q9NX20 251 aaKnown RBP11.06□□□□□ -0.64
CPSF7-205ENST00000439958 CHCHD1Q96BP2 118 aaKnown RBP11.06□□□□□ -0.64
CPSF7-205ENST00000439958 PPBPP02775 128 aa11.06□□□□□ -0.64
CPSF7-205ENST00000439958 LINC00482Q8N8I6 264 aa11.06□□□□□ -0.64
CPSF7-205ENST00000439958 FBN1P35555 2871 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms