RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 ZNF726P1Q15940 193 aa12.77□□□□□ -0.37
CCDC78-204ENST00000439619 ZNF506Q5JVG8 444 aa12.77□□□□□ -0.37
CCDC78-204ENST00000439619 IGHV3-73A0A0B4J1V6 119 aa12.76□□□□□ -0.37
CCDC78-204ENST00000439619 MAP1LC3B2A6NCE7 125 aa12.76□□□□□ -0.37
CCDC78-204ENST00000439619 A8MWV9 139 aa12.76□□□□□ -0.37
CCDC78-204ENST00000439619 FGF8P55075 233 aaPredicted RBP12.76□□□□□ -0.37
CCDC78-204ENST00000439619 UBE2G1P62253 170 aa12.76□□□□□ -0.37
CCDC78-204ENST00000439619 OR10J3Q5JRS4 329 aa12.76□□□□□ -0.37
CCDC78-204ENST00000439619 PIK3CD-AS1Q5SR53 167 aa12.76□□□□□ -0.37
CCDC78-204ENST00000439619 LINC00479Q96M42 142 aa12.76□□□□□ -0.37
CCDC78-204ENST00000439619 MAP1LC3BQ9GZQ8 125 aa12.76□□□□□ -0.37
CCDC78-204ENST00000439619 ZFP30Q9Y2G7 519 aa12.76□□□□□ -0.37
CCDC78-204ENST00000439619 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
CCDC78-204ENST00000439619 PCLOQ9Y6V0 5065 aa12.76□□□□□ -0.37
CCDC78-204ENST00000439619 PGPEP1LA6NFU8 196 aa12.75□□□□□ -0.37
CCDC78-204ENST00000439619 FAM74A7A6NL05 159 aa12.75□□□□□ -0.37
CCDC78-204ENST00000439619 RNASE3P12724 160 aaKnown RBP12.75□□□□□ -0.37
CCDC78-204ENST00000439619 LGALSLQ3ZCW2 172 aaPredicted RBP12.75□□□□□ -0.37
CCDC78-204ENST00000439619 TCEAL7Q9BRU2 100 aa12.75□□□□□ -0.37
CCDC78-204ENST00000439619 B4DEV8 164 aa12.74□□□□□ -0.37
CCDC78-204ENST00000439619 PSCAO43653 123 aa12.74□□□□□ -0.37
CCDC78-204ENST00000439619 DPPA3Q6W0C5 159 aa12.74□□□□□ -0.37
CCDC78-204ENST00000439619 ZFP2Q6ZN57 461 aa12.74□□□□□ -0.37
CCDC78-204ENST00000439619 Q86TA4 180 aa12.74□□□□□ -0.37
CCDC78-204ENST00000439619 SYT8Q8NBV8 401 aa12.74□□□□□ -0.37
CCDC78-204ENST00000439619 FMC1Q96HJ9 113 aa12.74□□□□□ -0.37
CCDC78-204ENST00000439619 A0A087WTM6 91 aa12.73□□□□□ -0.37
CCDC78-204ENST00000439619 LINC01556Q5JQF7 62 aa12.73□□□□□ -0.37
CCDC78-204ENST00000439619 ATP6V0E2Q8NHE4 81 aa12.73□□□□□ -0.37
CCDC78-204ENST00000439619 IGKV3D-20A0A0C4DH25 116 aa12.72□□□□□ -0.37
CCDC78-204ENST00000439619 FAM162BQ5T6X4 162 aa12.72□□□□□ -0.37
CCDC78-204ENST00000439619 LELP1Q5T871 98 aa12.72□□□□□ -0.37
CCDC78-204ENST00000439619 CST9LP1Q5W188 147 aa12.72□□□□□ -0.37
CCDC78-204ENST00000439619 Q8N1X5 172 aa12.72□□□□□ -0.37
CCDC78-204ENST00000439619 GTSF1LQ9H1H1 148 aa12.72□□□□□ -0.37
CCDC78-204ENST00000439619 IL36BQ9NZH7 164 aa12.72□□□□□ -0.37
CCDC78-204ENST00000439619 FHITP49789 147 aa12.71□□□□□ -0.37
CCDC78-204ENST00000439619 PARLQ9H300 379 aa12.71□□□□□ -0.37
CCDC78-204ENST00000439619 SCRT2Q9NQ03 307 aa12.71□□□□□ -0.37
CCDC78-204ENST00000439619 CYTL1Q9NRR1 136 aa12.71□□□□□ -0.37
CCDC78-204ENST00000439619 G3V3Q6 166 aa12.7□□□□□ -0.38
CCDC78-204ENST00000439619 RHODO00212 210 aa12.7□□□□□ -0.38
CCDC78-204ENST00000439619 ZNF345Q14585 488 aa12.7□□□□□ -0.38
CCDC78-204ENST00000439619 IBA57-AS1B1ANH7 110 aa12.69□□□□□ -0.38
CCDC78-204ENST00000439619 UMAD1C9J7I0 102 aa12.69□□□□□ -0.38
CCDC78-204ENST00000439619 H3BVH4 76 aa12.69□□□□□ -0.38
CCDC78-204ENST00000439619 M0R036 132 aa12.69□□□□□ -0.38
CCDC78-204ENST00000439619 AKR1C3P42330 323 aa12.69□□□□□ -0.38
CCDC78-204ENST00000439619 COX8CQ7Z4L0 72 aa12.69□□□□□ -0.38
CCDC78-204ENST00000439619 OR11H4Q8NGC9 324 aa12.69□□□□□ -0.38
CCDC78-204ENST00000439619 ZC2HC1AQ96GY0 325 aa12.69□□□□□ -0.38
CCDC78-204ENST00000439619 KRTAP4-5Q9BYR2 181 aa12.69□□□□□ -0.38
CCDC78-204ENST00000439619 TRBV6-1A0A0K0K1D8 114 aa12.68□□□□□ -0.38
CCDC78-204ENST00000439619 KRBOX1C9JBD0 128 aa12.68□□□□□ -0.38
CCDC78-204ENST00000439619 SH2D1AO60880 128 aa12.68□□□□□ -0.38
CCDC78-204ENST00000439619 TPT1P13693 172 aaKnown RBP12.68□□□□□ -0.38
CCDC78-204ENST00000439619 EIF5AP63241 154 aaKnown RBP12.68□□□□□ -0.38
CCDC78-204ENST00000439619 DNLZQ5SXM8 178 aa12.68□□□□□ -0.38
CCDC78-204ENST00000439619 KCNRGQ8N5I3 272 aa12.68□□□□□ -0.38
CCDC78-204ENST00000439619 PHLDA3Q9Y5J5 127 aa12.68□□□□□ -0.38
CCDC78-204ENST00000439619 A0A087WWC5 75 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 A0A0D9SG52 128 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 KANTRA0A1W2PQU2 76 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 GAGE12JA6NER3 117 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 IGHV3-30P01768 117 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 IGHV3-33P01772 117 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 S100A9P06702 114 aaKnown RBP12.67□□□□□ -0.38
CCDC78-204ENST00000439619 ARMS2P0C7Q2 107 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 SEC11BP0C7V7 166 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 IGHV3-30-3P0DP02 117 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 IGHV3-30-5P0DP03 117 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 GAGE1Q13065 139 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 GAGE4Q13068 117 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 GAGE5Q13069 117 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 GAGE13Q4V321 117 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 SFT2D1Q8WV19 159 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 Q9HAA7 133 aa12.67□□□□□ -0.38
CCDC78-204ENST00000439619 SMLR1H3BR10 107 aa12.66□□□□□ -0.38
CCDC78-204ENST00000439619 PFDN1O60925 122 aa12.66□□□□□ -0.38
CCDC78-204ENST00000439619 LTAP01374 205 aa12.66□□□□□ -0.38
CCDC78-204ENST00000439619 FAM213BQ8TBF2 198 aa12.66□□□□□ -0.38
CCDC78-204ENST00000439619 TM2D2Q9BX73 214 aa12.66□□□□□ -0.38
CCDC78-204ENST00000439619 RYR1P21817 5038 aa12.65□□□□□ -0.38
CCDC78-204ENST00000439619 GRIFINA4D1Z8 144 aa12.65□□□□□ -0.38
CCDC78-204ENST00000439619 HMSDA8MTL9 139 aa12.65□□□□□ -0.38
CCDC78-204ENST00000439619 PAGE4O60829 102 aa12.65□□□□□ -0.38
CCDC78-204ENST00000439619 CRIP1P50238 77 aa12.65□□□□□ -0.38
CCDC78-204ENST00000439619 LAGE3Q14657 143 aa12.65□□□□□ -0.38
CCDC78-204ENST00000439619 ZNF674Q2M3X9 581 aa12.65□□□□□ -0.38
CCDC78-204ENST00000439619 TOR2AQ5JU69 321 aa12.65□□□□□ -0.38
CCDC78-204ENST00000439619 FAM74A4Q5TZK3 123 aa12.65□□□□□ -0.38
CCDC78-204ENST00000439619 DMRTA1Q5VZB9 504 aa12.65□□□□□ -0.38
CCDC78-204ENST00000439619 ZNF471Q9BX82 626 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-204ENST00000439619 GCSHP23434 173 aa12.64□□□□□ -0.39
CCDC78-204ENST00000439619 FUSP35637 526 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC78-204ENST00000439619 LINC01559Q495D7 138 aa12.64□□□□□ -0.39
CCDC78-204ENST00000439619 Q6ZSN1 163 aa12.64□□□□□ -0.39
CCDC78-204ENST00000439619 ZFP82Q8N141 532 aa12.64□□□□□ -0.39
CCDC78-204ENST00000439619 NTN5Q8WTR8 489 aaPredicted RBP12.64□□□□□ -0.39
CCDC78-204ENST00000439619 TMSB15BA0A087X1C1 80 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms