RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 TRAV12-2A0A075B6T6 113 aa12.91□□□□□ -0.34
TVP23C-204ENST00000438826 KIR2DL5BA0A0G2JN68 375 aa12.91□□□□□ -0.34
TVP23C-204ENST00000438826 KIR2DL5BA0A0G2JPC4 375 aa12.91□□□□□ -0.34
TVP23C-204ENST00000438826 CD300EQ496F6 205 aaPredicted RBP12.91□□□□□ -0.34
TVP23C-204ENST00000438826 AMTNQ6UX39 209 aa12.91□□□□□ -0.34
TVP23C-204ENST00000438826 KIR2DL5AQ8N109 375 aa12.91□□□□□ -0.34
TVP23C-204ENST00000438826 CRXO43186 299 aaPredicted RBP12.9□□□□□ -0.34
TVP23C-204ENST00000438826 LINC00173Q6ZV60 143 aa12.9□□□□□ -0.34
TVP23C-204ENST00000438826 KNCNA6PVL3 124 aa12.89□□□□□ -0.35
TVP23C-204ENST00000438826 SPRY2O43597 315 aa12.89□□□□□ -0.35
TVP23C-204ENST00000438826 CD7P09564 240 aa12.89□□□□□ -0.35
TVP23C-204ENST00000438826 HLA-DRB4P13762 266 aa12.89□□□□□ -0.35
TVP23C-204ENST00000438826 OR2K2Q8NGT1 345 aa12.89□□□□□ -0.35
TVP23C-204ENST00000438826 PAM16Q9Y3D7 125 aa12.89□□□□□ -0.35
TVP23C-204ENST00000438826 HLA-DRB4X5D2U9 266 aa12.89□□□□□ -0.35
TVP23C-204ENST00000438826 OR4C46A6NHA9 309 aa12.89□□□□□ -0.35
TVP23C-204ENST00000438826 SYS1-DBNDD2H3BUS1 97 aa12.89□□□□□ -0.35
TVP23C-204ENST00000438826 GATA1P15976 413 aaPredicted RBP12.89□□□□□ -0.35
TVP23C-204ENST00000438826 MRAP2Q96G30 205 aa12.89□□□□□ -0.35
TVP23C-204ENST00000438826 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
TVP23C-204ENST00000438826 MAP1LC3CQ9BXW4 147 aa12.89□□□□□ -0.35
TVP23C-204ENST00000438826 TRAV25A0A0B4J276 109 aa12.88□□□□□ -0.35
TVP23C-204ENST00000438826 A8MTW9 85 aa12.88□□□□□ -0.35
TVP23C-204ENST00000438826 H3BMM0 161 aa12.88□□□□□ -0.35
TVP23C-204ENST00000438826 NXPH4O95158 308 aa12.88□□□□□ -0.35
TVP23C-204ENST00000438826 DPH3P1Q9H4G8 78 aa12.88□□□□□ -0.35
TVP23C-204ENST00000438826 NXT2Q9NPJ8 142 aaKnown RBP12.88□□□□□ -0.35
TVP23C-204ENST00000438826 NOTCH2Q04721 2471 aa12.87□□□□□ -0.35
TVP23C-204ENST00000438826 TRAV26-2A0A0B4J265 109 aa12.87□□□□□ -0.35
TVP23C-204ENST00000438826 DEFA6Q01524 100 aa12.87□□□□□ -0.35
TVP23C-204ENST00000438826 C20orf144Q9BQM9 153 aa12.87□□□□□ -0.35
TVP23C-204ENST00000438826 MAP6D1Q9H9H5 199 aa12.87□□□□□ -0.35
TVP23C-204ENST00000438826 SORL1Q92673 2214 aa12.87□□□□□ -0.35
TVP23C-204ENST00000438826 A0A096LNJ9 63 aa12.87□□□□□ -0.35
TVP23C-204ENST00000438826 LINC01546A6NGU7 62 aa12.87□□□□□ -0.35
TVP23C-204ENST00000438826 PROK1P58294 105 aa12.87□□□□□ -0.35
TVP23C-204ENST00000438826 C14orf178Q8N769 122 aaPredicted RBP12.87□□□□□ -0.35
TVP23C-204ENST00000438826 NRACQ8N912 160 aa12.87□□□□□ -0.35
TVP23C-204ENST00000438826 AP1S3Q96PC3 154 aa12.87□□□□□ -0.35
TVP23C-204ENST00000438826 ZNF256Q9Y2P7 627 aaPredicted RBP12.87□□□□□ -0.35
TVP23C-204ENST00000438826 AGRNO00468 2067 aa12.86□□□□□ -0.35
TVP23C-204ENST00000438826 IGHV1OR15-1A0A075B7D0 117 aa12.86□□□□□ -0.35
TVP23C-204ENST00000438826 SPATA12Q7Z6I5 190 aa12.86□□□□□ -0.35
TVP23C-204ENST00000438826 ZNF747Q9BV97 191 aa12.86□□□□□ -0.35
TVP23C-204ENST00000438826 IGHV3-16A0A0C4DH30 117 aa12.85□□□□□ -0.35
TVP23C-204ENST00000438826 C20orf202A1L168 122 aa12.85□□□□□ -0.35
TVP23C-204ENST00000438826 PRSS47A8MTI9 375 aa12.85□□□□□ -0.35
TVP23C-204ENST00000438826 HBDP02042 147 aa12.85□□□□□ -0.35
TVP23C-204ENST00000438826 DEFB125Q8N687 156 aa12.85□□□□□ -0.35
TVP23C-204ENST00000438826 ZNF124Q15973 351 aa12.85□□□□□ -0.35
TVP23C-204ENST00000438826 PET117Q6UWS5 81 aa12.85□□□□□ -0.35
TVP23C-204ENST00000438826 ATOH7Q8N100 152 aa12.85□□□□□ -0.35
TVP23C-204ENST00000438826 Q8N1Y9 231 aa12.85□□□□□ -0.35
TVP23C-204ENST00000438826 Q8N8P6 123 aa12.85□□□□□ -0.35
TVP23C-204ENST00000438826 FXYD7P58549 80 aa12.84□□□□□ -0.35
TVP23C-204ENST00000438826 C9orf85Q96MD7 179 aa12.84□□□□□ -0.35
TVP23C-204ENST00000438826 NDUFAF3Q9BU61 184 aa12.84□□□□□ -0.35
TVP23C-204ENST00000438826 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
TVP23C-204ENST00000438826 SPATA45Q537H7 98 aa12.83□□□□□ -0.36
TVP23C-204ENST00000438826 OTOGQ6ZRI0 2925 aa12.83□□□□□ -0.36
TVP23C-204ENST00000438826 INAFM1C9JVW0 142 aa12.82□□□□□ -0.36
TVP23C-204ENST00000438826 SMIM17P0DL12 118 aa12.82□□□□□ -0.36
TVP23C-204ENST00000438826 ZNF705AQ6ZN79 300 aaPredicted RBP12.82□□□□□ -0.36
TVP23C-204ENST00000438826 C14orf144Q96I85 54 aa12.82□□□□□ -0.36
TVP23C-204ENST00000438826 IGLV2-18A0A075B6J9 118 aa12.82□□□□□ -0.36
TVP23C-204ENST00000438826 TRAV9-2A0A087WT02 112 aa12.82□□□□□ -0.36
TVP23C-204ENST00000438826 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
TVP23C-204ENST00000438826 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
TVP23C-204ENST00000438826 MGPP08493 103 aa12.82□□□□□ -0.36
TVP23C-204ENST00000438826 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
TVP23C-204ENST00000438826 POM121L12Q8N7R1 296 aa12.82□□□□□ -0.36
TVP23C-204ENST00000438826 MUC4Q99102 2169 aa12.81□□□□□ -0.36
TVP23C-204ENST00000438826 TRGV11A0A075B6L2 103 aa12.81□□□□□ -0.36
TVP23C-204ENST00000438826 ADARB2-AS1A8MUL3 147 aa12.81□□□□□ -0.36
TVP23C-204ENST00000438826 H0Y8G0 127 aa12.81□□□□□ -0.36
TVP23C-204ENST00000438826 SYT8Q8NBV8 401 aa12.81□□□□□ -0.36
TVP23C-204ENST00000438826 KIF25-AS1Q9Y6Z4 181 aa12.81□□□□□ -0.36
TVP23C-204ENST00000438826 FCER1GP30273 86 aa12.8□□□□□ -0.36
TVP23C-204ENST00000438826 NSUN5P1Q3KNT7 163 aa12.8□□□□□ -0.36
TVP23C-204ENST00000438826 RASL10AQ92737 203 aa12.8□□□□□ -0.36
TVP23C-204ENST00000438826 MIEN1Q9BRT3 115 aa12.8□□□□□ -0.36
TVP23C-204ENST00000438826 CBY3A6NI87 242 aa12.8□□□□□ -0.36
TVP23C-204ENST00000438826 PPP1R17O96001 155 aa12.8□□□□□ -0.36
TVP23C-204ENST00000438826 RBMY1A1P0DJD3 496 aaKnown RBP12.8□□□□□ -0.36
TVP23C-204ENST00000438826 RBMY1CP0DJD4 496 aa12.8□□□□□ -0.36
TVP23C-204ENST00000438826 FOSL1P15407 271 aa12.8□□□□□ -0.36
TVP23C-204ENST00000438826 RBMY1FQ15415 496 aaKnown RBP12.8□□□□□ -0.36
TVP23C-204ENST00000438826 ODF3L2Q3SX64 289 aa12.8□□□□□ -0.36
TVP23C-204ENST00000438826 LINC01545Q5VT33 79 aa12.8□□□□□ -0.36
TVP23C-204ENST00000438826 C20orf78Q9BR46 151 aa12.8□□□□□ -0.36
TVP23C-204ENST00000438826 SETD2Q9BYW2 2564 aaPredicted RBP12.79□□□□□ -0.36
TVP23C-204ENST00000438826 SAP30O75446 220 aa12.79□□□□□ -0.36
TVP23C-204ENST00000438826 LINC00315P59091 139 aa12.79□□□□□ -0.36
TVP23C-204ENST00000438826 MAJINQ3KP22 176 aa12.79□□□□□ -0.36
TVP23C-204ENST00000438826 CLUHP3Q96NS8 147 aa12.79□□□□□ -0.36
TVP23C-204ENST00000438826 SUMO2P61956 95 aaKnown RBP12.78□□□□□ -0.36
TVP23C-204ENST00000438826 LAGE3Q14657 143 aa12.78□□□□□ -0.36
TVP23C-204ENST00000438826 IFI27L1Q96BM0 104 aa12.78□□□□□ -0.36
TVP23C-204ENST00000438826 MCRIP2Q9BUT9 160 aaKnown RBP12.78□□□□□ -0.36
TVP23C-204ENST00000438826 SMIM2Q9BVW6 85 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms