RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 CD5LO43866 347 aa8.96□□□□□ -0.98
TRAPPC9-202ENST00000438773 DEFB136Q30KP8 78 aa8.96□□□□□ -0.98
TRAPPC9-202ENST00000438773 LRRC75A-AS1Q8N1F1 130 aa8.96□□□□□ -0.98
TRAPPC9-202ENST00000438773 C14orf178Q8N769 122 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC9-202ENST00000438773 IGF2BP2-AS1Q96M15 143 aa8.96□□□□□ -0.98
TRAPPC9-202ENST00000438773 ADGRG4Q8IZF6 3080 aa8.95□□□□□ -0.98
TRAPPC9-202ENST00000438773 A6NDX4 124 aa8.95□□□□□ -0.98
TRAPPC9-202ENST00000438773 F6UB75 175 aa8.95□□□□□ -0.98
TRAPPC9-202ENST00000438773 LOXL1Q08397 574 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC9-202ENST00000438773 SPINK13Q1W4C9 94 aa8.95□□□□□ -0.98
TRAPPC9-202ENST00000438773 GAGE13Q4V321 117 aa8.95□□□□□ -0.98
TRAPPC9-202ENST00000438773 TRAV2A0A0B4J234 112 aa8.95□□□□□ -0.98
TRAPPC9-202ENST00000438773 TRGV11A0A075B6L2 103 aa8.95□□□□□ -0.98
TRAPPC9-202ENST00000438773 TRAV26-2A0A0B4J265 109 aa8.95□□□□□ -0.98
TRAPPC9-202ENST00000438773 RBX1P62877 108 aa8.95□□□□□ -0.98
TRAPPC9-202ENST00000438773 PCP2Q8IVA1 136 aa8.95□□□□□ -0.98
TRAPPC9-202ENST00000438773 VWC2LB2RUY7 222 aa8.94□□□□□ -0.98
TRAPPC9-202ENST00000438773 HOXD3P31249 432 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC9-202ENST00000438773 BVES-AS1Q5T3Y7 98 aa8.94□□□□□ -0.98
TRAPPC9-202ENST00000438773 WFDC11Q8NEX6 87 aa8.94□□□□□ -0.98
TRAPPC9-202ENST00000438773 MS4A6AQ9H2W1 248 aa8.94□□□□□ -0.98
TRAPPC9-202ENST00000438773 DKK2Q9UBU2 259 aa8.94□□□□□ -0.98
TRAPPC9-202ENST00000438773 DMXL1Q9Y485 3027 aa8.94□□□□□ -0.98
TRAPPC9-202ENST00000438773 K7EP13 123 aa8.94□□□□□ -0.98
TRAPPC9-202ENST00000438773 TRGV2A0A075B6R0 118 aa8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 ZNF48Q96MX3 618 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 IGHV3-73A0A0B4J1V6 119 aa8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 TRBV12-3P01733 135 aa8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 LGALS1P09382 135 aaKnown RBP8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 NEGR1Q7Z3B1 354 aa8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 TSSC4Q9Y5U2 329 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 GATA1P15976 413 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 SRSF1Q07955 248 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 UBE2E2Q96LR5 201 aa8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 DPH3P1Q9H4G8 78 aa8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 ANKRD17O75179 2603 aaKnown RBP8.93□□□□□ -0.98
TRAPPC9-202ENST00000438773 EGR2P11161 476 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC9-202ENST00000438773 ATMQ13315 3056 aa8.92□□□□□ -0.98
TRAPPC9-202ENST00000438773 H3BMG7 143 aa8.92□□□□□ -0.98
TRAPPC9-202ENST00000438773 FAM104BQ5XKR9 115 aa8.92□□□□□ -0.98
TRAPPC9-202ENST00000438773 CCDC140Q96MF4 163 aa8.92□□□□□ -0.98
TRAPPC9-202ENST00000438773 CHAC1Q9BUX1 264 aa8.92□□□□□ -0.98
TRAPPC9-202ENST00000438773 TRAV12-2A0A075B6T6 113 aa8.92□□□□□ -0.98
TRAPPC9-202ENST00000438773 FOXE3Q13461 319 aa8.92□□□□□ -0.98
TRAPPC9-202ENST00000438773 UNQ9165/PRO28630Q6UXU0 137 aa8.92□□□□□ -0.98
TRAPPC9-202ENST00000438773 MRAP2Q96G30 205 aa8.92□□□□□ -0.98
TRAPPC9-202ENST00000438773 KLF12Q9Y4X4 402 aa8.92□□□□□ -0.98
TRAPPC9-202ENST00000438773 C2orf70A6NJV1 201 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 PAX2Q02962 417 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 ANXA2RQ3ZCQ2 193 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 URB1-AS1Q96HZ7 61 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 PGPEP1Q9NXJ5 209 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 RAI1Q7Z5J4 1906 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 COX6CP09669 75 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 CHTOPQ9Y3Y2 248 aaKnown RBP8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 A0A087WWL8 130 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 PRAC2D3DTV9 90 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 SNCGO76070 127 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 NPYP01303 97 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 ANKRD39Q53RE8 183 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 PAPPA-AS1Q5QFB9 102 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 C16orf54Q6UWD8 224 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 RPL35AP18077 110 aaKnown RBP8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 MEIG1Q5JSS6 88 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 LINC00322Q6ZN03 302 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 OR5A1Q8NGJ0 315 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 SIGLEC8Q9NYZ4 499 aa8.91□□□□□ -0.98
TRAPPC9-202ENST00000438773 TACC2O95359 2948 aa8.9□□□□□ -0.98
TRAPPC9-202ENST00000438773 IGHV4-31P0DP07 118 aa8.9□□□□□ -0.98
TRAPPC9-202ENST00000438773 Q8N6K4 173 aa8.9□□□□□ -0.98
TRAPPC9-202ENST00000438773 CENPEQ02224 2701 aa8.9□□□□□ -0.98
TRAPPC9-202ENST00000438773 SLURP1P55000 103 aa8.9□□□□□ -0.98
TRAPPC9-202ENST00000438773 CKS1BP61024 79 aa8.9□□□□□ -0.98
TRAPPC9-202ENST00000438773 ORMDL2Q53FV1 153 aa8.9□□□□□ -0.98
TRAPPC9-202ENST00000438773 SH2D6Q7Z4S9 175 aa8.9□□□□□ -0.98
TRAPPC9-202ENST00000438773 GEMIN7Q9H840 131 aaKnown RBP8.9□□□□□ -0.98
TRAPPC9-202ENST00000438773 XCL2Q9UBD3 114 aa8.9□□□□□ -0.98
TRAPPC9-202ENST00000438773 KLK9Q9UKQ9 250 aa8.9□□□□□ -0.98
TRAPPC9-202ENST00000438773 KNCNA6PVL3 124 aa8.9□□□□□ -0.99
TRAPPC9-202ENST00000438773 UBE2L6O14933 153 aa8.9□□□□□ -0.99
TRAPPC9-202ENST00000438773 SUMO2P61956 95 aaKnown RBP8.9□□□□□ -0.99
TRAPPC9-202ENST00000438773 ZNF876PQ49A33 203 aa8.9□□□□□ -0.99
TRAPPC9-202ENST00000438773 OR9G4Q8NGQ1 327 aa8.9□□□□□ -0.99
TRAPPC9-202ENST00000438773 MBD6Q96DN6 1003 aa8.9□□□□□ -0.99
TRAPPC9-202ENST00000438773 MSRB1Q9NZV6 116 aa8.9□□□□□ -0.99
TRAPPC9-202ENST00000438773 MRPL53Q96EL3 112 aaKnown RBP8.89□□□□□ -0.99
TRAPPC9-202ENST00000438773 TOMM7Q9P0U1 55 aa8.89□□□□□ -0.99
TRAPPC9-202ENST00000438773 TNFRSF6BO95407 300 aa8.89□□□□□ -0.99
TRAPPC9-202ENST00000438773 IGF1P05019 195 aa8.89□□□□□ -0.99
TRAPPC9-202ENST00000438773 CDKN1BP46527 198 aa8.89□□□□□ -0.99
TRAPPC9-202ENST00000438773 CMC4P56277 68 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC9-202ENST00000438773 MRPL51Q4U2R6 128 aaKnown RBP8.89□□□□□ -0.99
TRAPPC9-202ENST00000438773 F8P00451 2351 aa8.89□□□□□ -0.99
TRAPPC9-202ENST00000438773 ATP6V0BQ99437 205 aa8.89□□□□□ -0.99
TRAPPC9-202ENST00000438773 ANAPC13Q9BS18 74 aa8.89□□□□□ -0.99
TRAPPC9-202ENST00000438773 DEFB1P60022 68 aa8.88□□□□□ -0.99
TRAPPC9-202ENST00000438773 ZNF415Q09FC8 603 aa8.88□□□□□ -0.99
TRAPPC9-202ENST00000438773 LAGE3Q14657 143 aa8.88□□□□□ -0.99
TRAPPC9-202ENST00000438773 IGHV4OR15-8A0A075B7B6 117 aa8.88□□□□□ -0.99
TRAPPC9-202ENST00000438773 A0A087WW49 117 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms