RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 B4DEV8 164 aa12.51□□□□□ -0.41
HMGN1-207ENST00000436324 M0R036 132 aa12.51□□□□□ -0.41
HMGN1-207ENST00000436324 SH2D1AO60880 128 aa12.51□□□□□ -0.41
HMGN1-207ENST00000436324 ASIPP42127 132 aa12.51□□□□□ -0.41
HMGN1-207ENST00000436324 AKR1C3P42330 323 aa12.51□□□□□ -0.41
HMGN1-207ENST00000436324 LINC00315P59091 139 aa12.51□□□□□ -0.41
HMGN1-207ENST00000436324 FMC1Q96HJ9 113 aa12.51□□□□□ -0.41
HMGN1-207ENST00000436324 ZFP30Q9Y2G7 519 aa12.51□□□□□ -0.41
HMGN1-207ENST00000436324 EIF5AP63241 154 aaKnown RBP12.5□□□□□ -0.41
HMGN1-207ENST00000436324 LGALSLQ3ZCW2 172 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-207ENST00000436324 SLC25A29Q8N8R3 303 aa12.5□□□□□ -0.41
HMGN1-207ENST00000436324 GRIFINA4D1Z8 144 aa12.49□□□□□ -0.41
HMGN1-207ENST00000436324 H3BVH4 76 aa12.49□□□□□ -0.41
HMGN1-207ENST00000436324 H2AFB1P0C5Y9 115 aa12.49□□□□□ -0.41
HMGN1-207ENST00000436324 TPT1P13693 172 aaKnown RBP12.49□□□□□ -0.41
HMGN1-207ENST00000436324 WFDC10BQ8IUB3 73 aa12.49□□□□□ -0.41
HMGN1-207ENST00000436324 TNFRSF18Q9Y5U5 241 aa12.49□□□□□ -0.41
HMGN1-207ENST00000436324 PKD1P98161 4303 aa12.49□□□□□ -0.41
HMGN1-207ENST00000436324 TMSB15BA0A087X1C1 80 aa12.48□□□□□ -0.41
HMGN1-207ENST00000436324 KRBOX1C9JBD0 128 aa12.48□□□□□ -0.41
HMGN1-207ENST00000436324 MED14OSP0DP75 135 aa12.48□□□□□ -0.41
HMGN1-207ENST00000436324 FAM162BQ5T6X4 162 aa12.48□□□□□ -0.41
HMGN1-207ENST00000436324 PTH2Q96A98 100 aa12.48□□□□□ -0.41
HMGN1-207ENST00000436324 TCEAL7Q9BRU2 100 aa12.48□□□□□ -0.41
HMGN1-207ENST00000436324 PRADC1Q9BSG0 188 aa12.48□□□□□ -0.41
HMGN1-207ENST00000436324 SCO2A0A1W2PP80 73 aa12.47□□□□□ -0.41
HMGN1-207ENST00000436324 C16orf90A8MZG2 172 aa12.47□□□□□ -0.41
HMGN1-207ENST00000436324 LTAP01374 205 aa12.47□□□□□ -0.41
HMGN1-207ENST00000436324 JPT2Q9H910 190 aa12.47□□□□□ -0.41
HMGN1-207ENST00000436324 LY96Q9Y6Y9 160 aa12.47□□□□□ -0.41
HMGN1-207ENST00000436324 DNAH11Q96DT5 4516 aa12.47□□□□□ -0.41
HMGN1-207ENST00000436324 TRBV6-1A0A0K0K1D8 114 aa12.46□□□□□ -0.41
HMGN1-207ENST00000436324 CIDEAO60543 219 aa12.46□□□□□ -0.41
HMGN1-207ENST00000436324 RHOHQ15669 191 aa12.46□□□□□ -0.41
HMGN1-207ENST00000436324 COX8CQ7Z4L0 72 aa12.46□□□□□ -0.41
HMGN1-207ENST00000436324 SH2D6Q7Z4S9 175 aa12.46□□□□□ -0.41
HMGN1-207ENST00000436324 SPATA12Q7Z6I5 190 aa12.46□□□□□ -0.41
HMGN1-207ENST00000436324 PARLQ9H300 379 aa12.46□□□□□ -0.41
HMGN1-207ENST00000436324 TRAV9-2A0A087WT02 112 aa12.45□□□□□ -0.42
HMGN1-207ENST00000436324 TRBV6-4A0A1B0GX49 114 aa12.45□□□□□ -0.42
HMGN1-207ENST00000436324 ARMS2P0C7Q2 107 aa12.45□□□□□ -0.42
HMGN1-207ENST00000436324 BTF3P20290 206 aaKnown RBP12.45□□□□□ -0.42
HMGN1-207ENST00000436324 ZNF674Q2M3X9 581 aa12.45□□□□□ -0.42
HMGN1-207ENST00000436324 Q6ZSN1 163 aa12.45□□□□□ -0.42
HMGN1-207ENST00000436324 IL36BQ9NZH7 164 aa12.45□□□□□ -0.42
HMGN1-207ENST00000436324 DYNC1H1Q14204 4646 aaKnown RBP12.45□□□□□ -0.42
HMGN1-207ENST00000436324 A8MWV9 139 aa12.44□□□□□ -0.42
HMGN1-207ENST00000436324 EVI2AP22794 236 aa12.44□□□□□ -0.42
HMGN1-207ENST00000436324 CCL20P78556 96 aa12.44□□□□□ -0.42
HMGN1-207ENST00000436324 SAMD10Q9BYL1 202 aa12.44□□□□□ -0.42
HMGN1-207ENST00000436324 PKHD1P08F94 4074 aa12.43□□□□□ -0.42
HMGN1-207ENST00000436324 HERC2O95714 4834 aa12.43□□□□□ -0.42
HMGN1-207ENST00000436324 MGST1P10620 155 aaKnown RBP12.43□□□□□ -0.42
HMGN1-207ENST00000436324 LINC01559Q495D7 138 aa12.43□□□□□ -0.42
HMGN1-207ENST00000436324 Q6ZRN7 208 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-207ENST00000436324 TCTE3Q8IZS6 198 aa12.43□□□□□ -0.42
HMGN1-207ENST00000436324 SYT8Q8NBV8 401 aa12.43□□□□□ -0.42
HMGN1-207ENST00000436324 GNG13Q9P2W3 67 aa12.43□□□□□ -0.42
HMGN1-207ENST00000436324 KIAA1109Q2LD37 5005 aa12.43□□□□□ -0.42
HMGN1-207ENST00000436324 S100A9P06702 114 aaKnown RBP12.42□□□□□ -0.42
HMGN1-207ENST00000436324 DNAH10OSP0CZ25 163 aa12.42□□□□□ -0.42
HMGN1-207ENST00000436324 DNLZQ5SXM8 178 aa12.42□□□□□ -0.42
HMGN1-207ENST00000436324 BAGE2Q86Y30 109 aa12.42□□□□□ -0.42
HMGN1-207ENST00000436324 PHLDA3Q9Y5J5 127 aa12.42□□□□□ -0.42
HMGN1-207ENST00000436324 GAGE12JA6NER3 117 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 M0R381 172 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 CRYGDP07320 174 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 TIRAPP58753 221 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 KRTAP10-2P60368 255 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 GAGE1Q13065 139 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 GAGE4Q13068 117 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 GAGE5Q13069 117 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 OR10J3Q5JRS4 329 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 PIK3CD-AS1Q5SR53 167 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 ZFP2Q6ZN57 461 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 Q6ZNX1 250 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 ATP6V0E2Q8NHE4 81 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 MSRB1Q9NZV6 116 aa12.41□□□□□ -0.42
HMGN1-207ENST00000436324 hCG_2014768A0A024R1R8 64 aa12.4□□□□□ -0.42
HMGN1-207ENST00000436324 TRAV8-6A0A0B4J262 113 aa12.4□□□□□ -0.42
HMGN1-207ENST00000436324 RPL19P84098 196 aaKnown RBP12.4□□□□□ -0.42
HMGN1-207ENST00000436324 FAM74A4Q5TZK3 123 aa12.4□□□□□ -0.42
HMGN1-207ENST00000436324 EIF5AL1Q6IS14 154 aaKnown RBP12.4□□□□□ -0.42
HMGN1-207ENST00000436324 PRR27Q6MZM9 219 aa12.4□□□□□ -0.42
HMGN1-207ENST00000436324 NFE4Q86UQ8 179 aa12.4□□□□□ -0.42
HMGN1-207ENST00000436324 C14orf178Q8N769 122 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-207ENST00000436324 Q9UF83 564 aa12.4□□□□□ -0.42
HMGN1-207ENST00000436324 A0A087WWL8 130 aa12.39□□□□□ -0.43
HMGN1-207ENST00000436324 IGHV3-38A0A0C4DH36 116 aa12.39□□□□□ -0.43
HMGN1-207ENST00000436324 RAB5CP51148 216 aa12.39□□□□□ -0.43
HMGN1-207ENST00000436324 UFSP1Q6NVU6 142 aa12.39□□□□□ -0.43
HMGN1-207ENST00000436324 GTSF1LQ9H1H1 148 aa12.39□□□□□ -0.43
HMGN1-207ENST00000436324 MANBALQ9NQG1 85 aa12.39□□□□□ -0.43
HMGN1-207ENST00000436324 C1QBP02746 253 aa12.38□□□□□ -0.43
HMGN1-207ENST00000436324 SULT1A2P50226 295 aa12.38□□□□□ -0.43
HMGN1-207ENST00000436324 DERL1Q9BUN8 251 aa12.38□□□□□ -0.43
HMGN1-207ENST00000436324 MLST8Q9BVC4 326 aa12.38□□□□□ -0.43
HMGN1-207ENST00000436324 SCRT2Q9NQ03 307 aa12.38□□□□□ -0.43
HMGN1-207ENST00000436324 TRAV1-1A0A0B4J248 108 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 288.3 ms