RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 PPP1R17O96001 155 aa12.49□□□□□ -0.41
LIMK1-203ENST00000435201 TRAV12-3A0A0B4J271 114 aa12.48□□□□□ -0.41
LIMK1-203ENST00000435201 ZNF25P17030 456 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-203ENST00000435201 DUX5Q96PT3 197 aa12.48□□□□□ -0.41
LIMK1-203ENST00000435201 K7EMI3 77 aa12.48□□□□□ -0.41
LIMK1-203ENST00000435201 SMIM17P0DL12 118 aa12.48□□□□□ -0.41
LIMK1-203ENST00000435201 SUMO2P61956 95 aaKnown RBP12.48□□□□□ -0.41
LIMK1-203ENST00000435201 POM121L12Q8N7R1 296 aa12.48□□□□□ -0.41
LIMK1-203ENST00000435201 TP73-AS1Q9UF72 201 aa12.48□□□□□ -0.41
LIMK1-203ENST00000435201 LINC01619G3V211 115 aa12.47□□□□□ -0.41
LIMK1-203ENST00000435201 SPRY2O43597 315 aa12.47□□□□□ -0.41
LIMK1-203ENST00000435201 MGPP08493 103 aa12.47□□□□□ -0.41
LIMK1-203ENST00000435201 ANKRD39Q53RE8 183 aa12.47□□□□□ -0.41
LIMK1-203ENST00000435201 TCTEX1D4Q5JR98 221 aa12.47□□□□□ -0.41
LIMK1-203ENST00000435201 FOXI2Q6ZQN5 318 aa12.47□□□□□ -0.41
LIMK1-203ENST00000435201 RASL10AQ92737 203 aa12.47□□□□□ -0.41
LIMK1-203ENST00000435201 PRSS1P07477 247 aa12.46□□□□□ -0.41
LIMK1-203ENST00000435201 CD7P09564 240 aa12.46□□□□□ -0.41
LIMK1-203ENST00000435201 G0S2P27469 103 aa12.46□□□□□ -0.41
LIMK1-203ENST00000435201 CDKN1BP46527 198 aa12.46□□□□□ -0.41
LIMK1-203ENST00000435201 ODF1Q14990 250 aa12.46□□□□□ -0.41
LIMK1-203ENST00000435201 ORMDL2Q53FV1 153 aa12.46□□□□□ -0.41
LIMK1-203ENST00000435201 C12orf54Q6X4T0 127 aa12.46□□□□□ -0.41
LIMK1-203ENST00000435201 C4orf3Q8WVX3 66 aa12.46□□□□□ -0.41
LIMK1-203ENST00000435201 SLURP1P55000 103 aa12.46□□□□□ -0.42
LIMK1-203ENST00000435201 WFDC12Q8WWY7 111 aa12.46□□□□□ -0.42
LIMK1-203ENST00000435201 ZMAT4Q9H898 229 aa12.46□□□□□ -0.42
LIMK1-203ENST00000435201 PEMTQ9UBM1 199 aa12.46□□□□□ -0.42
LIMK1-203ENST00000435201 DKK2Q9UBU2 259 aa12.46□□□□□ -0.42
LIMK1-203ENST00000435201 MXRA5Q9NR99 2828 aa12.46□□□□□ -0.42
LIMK1-203ENST00000435201 NUDT3O95989 172 aa12.45□□□□□ -0.42
LIMK1-203ENST00000435201 GAGE1Q13065 139 aa12.45□□□□□ -0.42
LIMK1-203ENST00000435201 TMEM208Q9BTX3 173 aa12.45□□□□□ -0.42
LIMK1-203ENST00000435201 TRAV2A0A0B4J234 112 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 DEFB136Q30KP8 78 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 MPV17L2Q567V2 206 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 ADAMTSL5Q6ZMM2 481 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 WFDC11Q8NEX6 87 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 KIF25-AS1Q9Y6Z4 181 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 DOPEY2Q9Y3R5 2298 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 APCP25054 2843 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 DLEU1O43261 78 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 IGKV3-20P01619 116 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 FGF6P10767 208 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 C18orf65Q6ZTR6 163 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
LIMK1-203ENST00000435201 C9orf85Q96MD7 179 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 FOXC2Q99958 501 aa12.44□□□□□ -0.42
LIMK1-203ENST00000435201 TEX15Q9BXT5 2789 aa12.43□□□□□ -0.42
LIMK1-203ENST00000435201 IGHV3-16A0A0C4DH30 117 aa12.43□□□□□ -0.42
LIMK1-203ENST00000435201 BOD1L2Q8IYS8 172 aa12.43□□□□□ -0.42
LIMK1-203ENST00000435201 OR11H1Q8NG94 326 aa12.43□□□□□ -0.42
LIMK1-203ENST00000435201 MUC4Q99102 2169 aa12.43□□□□□ -0.42
LIMK1-203ENST00000435201 TRAV12-2A0A075B6T6 113 aa12.42□□□□□ -0.42
LIMK1-203ENST00000435201 IGHV1OR15-1A0A075B7D0 117 aa12.42□□□□□ -0.42
LIMK1-203ENST00000435201 IGKCP01834 107 aa12.42□□□□□ -0.42
LIMK1-203ENST00000435201 LINC00315P59091 139 aa12.42□□□□□ -0.42
LIMK1-203ENST00000435201 SPINK13Q1W4C9 94 aa12.42□□□□□ -0.42
LIMK1-203ENST00000435201 BVES-AS1Q5T3Y7 98 aa12.42□□□□□ -0.42
LIMK1-203ENST00000435201 C2orf91Q6ZV80 131 aa12.42□□□□□ -0.42
LIMK1-203ENST00000435201 SYT8Q8NBV8 401 aa12.42□□□□□ -0.42
LIMK1-203ENST00000435201 OR9G4Q8NGQ1 327 aa12.42□□□□□ -0.42
LIMK1-203ENST00000435201 DPM2O94777 84 aa12.42□□□□□ -0.42
LIMK1-203ENST00000435201 RPL32P62910 135 aaKnown RBP12.42□□□□□ -0.42
LIMK1-203ENST00000435201 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.41□□□□□ -0.42
LIMK1-203ENST00000435201 KHDC1LQ5JSQ8 128 aa12.41□□□□□ -0.42
LIMK1-203ENST00000435201 AMTNQ6UX39 209 aa12.41□□□□□ -0.42
LIMK1-203ENST00000435201 SIVA1O15304 175 aa12.4□□□□□ -0.42
LIMK1-203ENST00000435201 Q6ZSV7 163 aa12.4□□□□□ -0.42
LIMK1-203ENST00000435201 ORAOV1Q8WV07 137 aa12.4□□□□□ -0.42
LIMK1-203ENST00000435201 TOMM6Q96B49 74 aa12.4□□□□□ -0.42
LIMK1-203ENST00000435201 DNAJC9-AS1A6NH13 148 aa12.4□□□□□ -0.42
LIMK1-203ENST00000435201 Q8N1Y9 231 aa12.4□□□□□ -0.42
LIMK1-203ENST00000435201 KLHL30-AS1Q8NEE0 82 aa12.4□□□□□ -0.42
LIMK1-203ENST00000435201 HHLA3Q9XRX5 114 aa12.4□□□□□ -0.42
LIMK1-203ENST00000435201 TRGV11A0A075B6L2 103 aa12.39□□□□□ -0.43
LIMK1-203ENST00000435201 A0A087WX48 190 aa12.39□□□□□ -0.43
LIMK1-203ENST00000435201 TRAV12-1A0A0B4J245 112 aa12.39□□□□□ -0.43
LIMK1-203ENST00000435201 CSTL1Q9H114 145 aa12.39□□□□□ -0.43
LIMK1-203ENST00000435201 COX11Q9Y6N1 276 aa12.39□□□□□ -0.43
LIMK1-203ENST00000435201 A8MTW9 85 aa12.38□□□□□ -0.43
LIMK1-203ENST00000435201 HLA-DRB4P13762 266 aa12.38□□□□□ -0.43
LIMK1-203ENST00000435201 NMUP48645 174 aa12.38□□□□□ -0.43
LIMK1-203ENST00000435201 SUMO4Q6EEV6 95 aa12.38□□□□□ -0.43
LIMK1-203ENST00000435201 MDFICQ9P1T7 246 aa12.38□□□□□ -0.43
LIMK1-203ENST00000435201 HLA-DRB4X5D2U9 266 aa12.38□□□□□ -0.43
LIMK1-203ENST00000435201 ITPR3Q14573 2671 aa12.38□□□□□ -0.43
LIMK1-203ENST00000435201 NBPF19A0A087WUL8 3843 aa12.38□□□□□ -0.43
LIMK1-203ENST00000435201 DEFB131AP59861 70 aa12.38□□□□□ -0.43
LIMK1-203ENST00000435201 DYNLRB2Q8TF09 96 aa12.38□□□□□ -0.43
LIMK1-203ENST00000435201 SCGB3A1Q96QR1 104 aa12.38□□□□□ -0.43
LIMK1-203ENST00000435201 LINC01549A6NIU2 74 aa12.37□□□□□ -0.43
LIMK1-203ENST00000435201 PLA2G2AP14555 144 aa12.37□□□□□ -0.43
LIMK1-203ENST00000435201 PLNP26678 52 aa12.37□□□□□ -0.43
LIMK1-203ENST00000435201 DLX4Q92988 240 aaPredicted RBP12.37□□□□□ -0.43
LIMK1-203ENST00000435201 JPT2Q9H910 190 aa12.37□□□□□ -0.43
LIMK1-203ENST00000435201 MRPL35Q9NZE8 188 aaKnown RBP12.37□□□□□ -0.43
LIMK1-203ENST00000435201 A0A087WWL8 130 aa12.36□□□□□ -0.43
LIMK1-203ENST00000435201 F5H697 171 aa12.36□□□□□ -0.43
LIMK1-203ENST00000435201 J3QKU1 62 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms