RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 LY6DQ14210 128 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 TRPT1Q86TN4 253 aaKnown RBP5.81□□□□□ -1.48
CPSF6-202ENST00000435070 JPT2Q9H910 190 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 SHISA9B4DS77 424 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 J3KT08 172 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 IGHV3-11P01762 117 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 BSPH1Q075Z2 132 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 ZNF833PQ6ZTB9 187 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 PPP1R27Q86WC6 154 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 SPENQ96T58 3664 aaKnown RBP5.81□□□□□ -1.48
CPSF6-202ENST00000435070 ERCC8Q13216 396 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 KNCNA6PVL3 124 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 IGLV2-23P01705 113 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 OR11H6Q8NGC7 330 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 NTN5Q8WTR8 489 aaPredicted RBP5.81□□□□□ -1.48
CPSF6-202ENST00000435070 PRR25Q96S07 402 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 ASIPP42127 132 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 RNF182Q8N6D2 247 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 SCGB3A1Q96QR1 104 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 M0R381 172 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 RHODO00212 210 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 HOXB4P17483 251 aaPredicted RBP5.8□□□□□ -1.48
CPSF6-202ENST00000435070 LAGE3Q14657 143 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 PSCAO43653 123 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 DAD1P61803 113 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 FAM27E3Q08E93 113 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 SHANK2-AS3Q9BTD1 123 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 PPDPFQ9H3Y8 114 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 INS-IGF2F8WCM5 200 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 INSP01308 110 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 SRSF2Q01130 221 aaKnown RBP5.8□□□□□ -1.48
CPSF6-202ENST00000435070 TMEM86BQ8N661 226 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 RNF125Q96EQ8 232 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 ZZEF1O43149 2961 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 F8VRH5 84 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 Q8N8P6 123 aa5.8□□□□□ -1.48
CPSF6-202ENST00000435070 SYNJ2BPP57105 145 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 HAMPP81172 84 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 MRPL23Q16540 153 aaKnown RBP5.79□□□□□ -1.48
CPSF6-202ENST00000435070 TMEM14CQ9P0S9 112 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 H7C1H1 209 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 PRB1P04280 392 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 SRD5A1P18405 259 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 C9orf106Q8NAJ2 232 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 NBASA2RRP1 2371 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 C15orf53Q8NAA6 179 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 TMEM200BQ69YZ2 307 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 TRAV8-3A0A0A6YYJ7 113 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 LHBP01229 141 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 ZNF491Q8N8L2 437 aa5.79□□□□□ -1.48
CPSF6-202ENST00000435070 SEC61GP60059 68 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 TMEM243Q9BU79 118 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 A0A0U1RRA0 63 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 TRAV12-2A0A075B6T6 113 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 IGLC6P0CF74 106 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 Q6ZS46 218 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 NDUFA11Q86Y39 141 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 ADGRG4Q8IZF6 3080 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 K7ERS5 55 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 UBL5Q9BZL1 73 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 TEX49A0A1B0GTD5 131 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 H3BRN7 92 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 UBE2E1P51965 193 aa5.78□□□□□ -1.48
CPSF6-202ENST00000435070 TRGV4A0A0C4DH28 118 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 M0QXV9 152 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 UBE2D1P51668 147 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 UBE2D3P61077 147 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 UBE2D2P62837 147 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 MRGPRG-AS1Q2M3A8 158 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 CHCHD5Q9BSY4 110 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 SPXQ9BT56 116 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 K7EM74 188 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 IGHV1-46P01743 117 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 C8orf31Q8N9H6 132 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 SIGLEC9Q9Y336 463 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 PRAC2D3DTV9 90 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 SOCS3O14543 225 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 NDUFS5O43920 106 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 LYPD2Q6UXB3 125 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 Q8N1Y9 231 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 CFHR4Q92496 578 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 EP300Q09472 2414 aaPredicted RBP5.77□□□□□ -1.49
CPSF6-202ENST00000435070 NTN3O00634 580 aaPredicted RBP5.77□□□□□ -1.49
CPSF6-202ENST00000435070 CD7P09564 240 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 RPL35AP18077 110 aaKnown RBP5.77□□□□□ -1.49
CPSF6-202ENST00000435070 ATRXP46100 2492 aa5.77□□□□□ -1.49
CPSF6-202ENST00000435070 ATMQ13315 3056 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 TRBV6-1A0A0K0K1D8 114 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 TM4SF5O14894 197 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 CFC1BP0CG36 223 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 CFC1P0CG37 223 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 NPC2P61916 151 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 PRR4Q16378 134 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 IGLV2-18A0A075B6J9 118 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 TRAV13-1A0A0B4J241 112 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 FAM57AQ8TBR7 257 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 TRIOBPQ9H2D6 2365 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 IGHV3-64A0A075B6Q5 118 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 I3L2K1 104 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 IL17RELQ6ZVW7 336 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms