RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 HIST1H2BCP62807 126 aa9.46□□□□□ -0.9
UBE3B-203ENST00000434735 FHL1Q13642 323 aa9.46□□□□□ -0.9
UBE3B-203ENST00000434735 HIST2H2BEQ16778 126 aa9.46□□□□□ -0.9
UBE3B-203ENST00000434735 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.46□□□□□ -0.9
UBE3B-203ENST00000434735 Q6ZWC4 215 aa9.46□□□□□ -0.9
UBE3B-203ENST00000434735 HIST1H2BHQ93079 126 aa9.46□□□□□ -0.9
UBE3B-203ENST00000434735 HIST1H2BNQ99877 126 aa9.46□□□□□ -0.9
UBE3B-203ENST00000434735 HIST1H2BMQ99879 126 aa9.46□□□□□ -0.9
UBE3B-203ENST00000434735 HLA-DMBP28068 263 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 ADAMTSL5Q6ZMM2 481 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 ZNF493Q6ZR52 646 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 hDV102S1A0JD36 115 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 TRBV19A0A075B6N1 114 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 C9JAW5 83 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 C22orf34Q6ZV56 151 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 ZNF491Q8N8L2 437 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 GTSF1Q8WW33 167 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 TIMM17AQ99595 171 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 IGF1P05019 195 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 NPBQ8NG41 125 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 LINC01006Q8NI28 216 aa9.45□□□□□ -0.9
UBE3B-203ENST00000434735 NAA38Q9BRA0 125 aaKnown RBP9.45□□□□□ -0.9
UBE3B-203ENST00000434735 SH2D6Q7Z4S9 175 aa9.44□□□□□ -0.9
UBE3B-203ENST00000434735 H3BRN7 92 aa9.44□□□□□ -0.9
UBE3B-203ENST00000434735 LINC00479Q96M42 142 aa9.44□□□□□ -0.9
UBE3B-203ENST00000434735 CDSNQ15517 529 aa9.44□□□□□ -0.9
UBE3B-203ENST00000434735 Q6ZS49 121 aa9.44□□□□□ -0.9
UBE3B-203ENST00000434735 CAMK2N2Q96S95 79 aa9.44□□□□□ -0.9
UBE3B-203ENST00000434735 HERVK_113P63121 156 aa9.44□□□□□ -0.9
UBE3B-203ENST00000434735 SYS1-DBNDD2H3BUS1 97 aa9.43□□□□□ -0.9
UBE3B-203ENST00000434735 IGLC1P0CG04 106 aa9.43□□□□□ -0.9
UBE3B-203ENST00000434735 QRFPP83859 136 aa9.43□□□□□ -0.9
UBE3B-203ENST00000434735 SRSF3P84103 164 aaKnown RBP9.43□□□□□ -0.9
UBE3B-203ENST00000434735 HHLA3Q9XRX5 114 aa9.43□□□□□ -0.9
UBE3B-203ENST00000434735 PRSS46E5RG02 174 aa9.43□□□□□ -0.9
UBE3B-203ENST00000434735 AMTNQ6UX39 209 aa9.43□□□□□ -0.9
UBE3B-203ENST00000434735 ETDCA0A1B0GVM5 59 aa9.43□□□□□ -0.9
UBE3B-203ENST00000434735 MSMPQ1L6U9 139 aa9.43□□□□□ -0.9
UBE3B-203ENST00000434735 C8orf31Q8N9H6 132 aa9.43□□□□□ -0.9
UBE3B-203ENST00000434735 PLXNA2O75051 1894 aa9.43□□□□□ -0.9
UBE3B-203ENST00000434735 LTBP2Q14767 1821 aa9.43□□□□□ -0.9
UBE3B-203ENST00000434735 HEATR5AQ86XA9 2040 aa9.42□□□□□ -0.9
UBE3B-203ENST00000434735 UBE2CO00762 179 aa9.42□□□□□ -0.9
UBE3B-203ENST00000434735 GNRH2O43555 120 aa9.42□□□□□ -0.9
UBE3B-203ENST00000434735 BTCP35070 178 aa9.42□□□□□ -0.9
UBE3B-203ENST00000434735 NDUFA12Q9UI09 145 aa9.42□□□□□ -0.9
UBE3B-203ENST00000434735 TMEM213A2RRL7 107 aa9.42□□□□□ -0.9
UBE3B-203ENST00000434735 RNASE13Q5GAN3 156 aaKnown RBP9.42□□□□□ -0.9
UBE3B-203ENST00000434735 Q8N8P6 123 aa9.42□□□□□ -0.9
UBE3B-203ENST00000434735 ZNF492Q9P255 531 aa9.42□□□□□ -0.9
UBE3B-203ENST00000434735 NACAE9PAV3 2078 aa9.42□□□□□ -0.9
UBE3B-203ENST00000434735 TRAV13-2A0A0B4J235 113 aa9.41□□□□□ -0.9
UBE3B-203ENST00000434735 IGKV2-24A0A0C4DH68 120 aa9.41□□□□□ -0.9
UBE3B-203ENST00000434735 TRBV12-3P01733 135 aa9.41□□□□□ -0.9
UBE3B-203ENST00000434735 HIST1H2BLQ99880 126 aa9.41□□□□□ -0.9
UBE3B-203ENST00000434735 A0A087X0K7 114 aa9.41□□□□□ -0.9
UBE3B-203ENST00000434735 SPTBN4Q9H254 2564 aa9.41□□□□□ -0.9
UBE3B-203ENST00000434735 UBE2AP49459 152 aa9.4□□□□□ -0.9
UBE3B-203ENST00000434735 DEFB105AQ8NG35 78 aa9.4□□□□□ -0.9
UBE3B-203ENST00000434735 TMEM131Q92545 1883 aa9.4□□□□□ -0.9
UBE3B-203ENST00000434735 IGLC7A0M8Q6 106 aa9.4□□□□□ -0.9
UBE3B-203ENST00000434735 TMEM89A2RUT3 159 aa9.4□□□□□ -0.9
UBE3B-203ENST00000434735 FAM231BA6NCW3 169 aa9.4□□□□□ -0.9
UBE3B-203ENST00000434735 KLK12Q9UKR0 248 aa9.4□□□□□ -0.9
UBE3B-203ENST00000434735 TRAV26-2A0A0B4J265 109 aa9.4□□□□□ -0.9
UBE3B-203ENST00000434735 CRYGCP07315 174 aa9.4□□□□□ -0.9
UBE3B-203ENST00000434735 ATRAIDQ6UW56 229 aa9.4□□□□□ -0.9
UBE3B-203ENST00000434735 STPG4Q8N801 248 aa9.4□□□□□ -0.9
UBE3B-203ENST00000434735 FAM104BQ5XKR9 115 aa9.4□□□□□ -0.91
UBE3B-203ENST00000434735 TNRC6AQ8NDV7 1962 aaKnown RBP9.4□□□□□ -0.91
UBE3B-203ENST00000434735 C3orf79P0CE67 100 aa9.4□□□□□ -0.91
UBE3B-203ENST00000434735 KIR3DS1Q14943 382 aa9.39□□□□□ -0.91
UBE3B-203ENST00000434735 VOPP1Q96AW1 172 aa9.39□□□□□ -0.91
UBE3B-203ENST00000434735 GPHB5Q86YW7 130 aa9.39□□□□□ -0.91
UBE3B-203ENST00000434735 TRAV26-1A0A087WT03 109 aa9.38□□□□□ -0.91
UBE3B-203ENST00000434735 IGHG4P01861 327 aa9.38□□□□□ -0.91
UBE3B-203ENST00000434735 CXCL1P09341 107 aa9.38□□□□□ -0.91
UBE3B-203ENST00000434735 C17orf77Q96MU5 243 aa9.38□□□□□ -0.91
UBE3B-203ENST00000434735 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
UBE3B-203ENST00000434735 CFPP27918 469 aa9.37□□□□□ -0.91
UBE3B-203ENST00000434735 C5orf38Q86SI9 138 aa9.37□□□□□ -0.91
UBE3B-203ENST00000434735 K7EQD1 137 aa9.37□□□□□ -0.91
UBE3B-203ENST00000434735 NDUFB1O75438 58 aa9.37□□□□□ -0.91
UBE3B-203ENST00000434735 DYNAPQ8N1N2 210 aa9.37□□□□□ -0.91
UBE3B-203ENST00000434735 LINC01548A6NM66 108 aa9.37□□□□□ -0.91
UBE3B-203ENST00000434735 UTF1Q5T230 341 aa9.37□□□□□ -0.91
UBE3B-203ENST00000434735 C10orf99Q6UWK7 81 aa9.37□□□□□ -0.91
UBE3B-203ENST00000434735 FAM222AQ5U5X8 452 aa9.37□□□□□ -0.91
UBE3B-203ENST00000434735 MORN5Q5VZ52 161 aa9.37□□□□□ -0.91
UBE3B-203ENST00000434735 MAP6D1Q9H9H5 199 aa9.37□□□□□ -0.91
UBE3B-203ENST00000434735 MPV17L2Q567V2 206 aa9.36□□□□□ -0.91
UBE3B-203ENST00000434735 BOD1L2Q8IYS8 172 aa9.36□□□□□ -0.91
UBE3B-203ENST00000434735 HIST3H2BBQ8N257 126 aa9.36□□□□□ -0.91
UBE3B-203ENST00000434735 TMEM14CQ9P0S9 112 aa9.36□□□□□ -0.91
UBE3B-203ENST00000434735 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-203ENST00000434735 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-203ENST00000434735 MBD6Q96DN6 1003 aa9.36□□□□□ -0.91
UBE3B-203ENST00000434735 IGLV11-55A0A075B6I3 123 aa9.36□□□□□ -0.91
UBE3B-203ENST00000434735 TRAV12-1A0A0B4J245 112 aa9.36□□□□□ -0.91
UBE3B-203ENST00000434735 FUSP35637 526 aaKnown RBP eCLIP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms