RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TRAV8-6A0A0B4J262 113 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 A0A0J9YX75 114 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 GAGE10A6NGK3 116 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 K7EQG2 157 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 FSHBP01225 129 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 SMIM13P0DJ93 91 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 ERASQ7Z444 233 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 RPL39LQ96EH5 51 aaKnown RBP7.81□□□□□ -1.16
CD44-210ENST00000434472 CSTL1Q9H114 145 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 NCOR2Q9Y618 2525 aa7.8□□□□□ -1.16
CD44-210ENST00000434472 C2orf66Q6UXQ4 117 aa7.8□□□□□ -1.16
CD44-210ENST00000434472 Q6YL49 198 aa7.8□□□□□ -1.16
CD44-210ENST00000434472 NEXN-AS1Q8NBZ9 246 aa7.8□□□□□ -1.16
CD44-210ENST00000434472 UBE2E2Q96LR5 201 aa7.8□□□□□ -1.16
CD44-210ENST00000434472 CACNA1BQ00975 2339 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 TRBV25-1A0A075B6N4 114 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 TRAV12-3A0A0B4J271 114 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 RNF223E7ERA6 249 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 LINC01619G3V211 115 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 VCYO14598 125 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 CD7P09564 240 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 ZNF688P0C7X2 276 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 LINC00315P59091 139 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 PAPPA-AS1Q5QFB9 102 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 RNF152Q8N8N0 203 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 NRGNQ92686 78 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 C9orf85Q96MD7 179 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 BEX4Q9NWD9 120 aaPredicted RBP7.79□□□□□ -1.16
CD44-210ENST00000434472 CYSLTR1Q9Y271 337 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 CHD8Q9HCK8 2581 aa7.79□□□□□ -1.16
CD44-210ENST00000434472 IGHV3-16A0A0C4DH30 117 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 TRBV6-5A0A0K0K1A5 114 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 K7EP34 96 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 SPRY2O43597 315 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 EDN2P20800 178 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 GCSHP23434 173 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 TMEM141Q96I45 108 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 TM2D2Q9BX73 214 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 ITPR1Q14643 2758 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 AKAP6Q13023 2319 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 IGHV1OR15-1A0A075B7D0 117 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 OR11H12B2RN74 326 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 H3BUT2 72 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 IGHV4-31P0DP07 118 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 CDKN1BP46527 198 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 POLR2KP53803 58 aaKnown RBP7.78□□□□□ -1.16
CD44-210ENST00000434472 SYNJ2BPP57105 145 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 SUMO4Q6EEV6 95 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 FOXI2Q6ZQN5 318 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 CEND1Q8N111 149 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 LRRC75A-AS1Q8N1F1 130 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 OR11H1Q8NG94 326 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 OR5A1Q8NGJ0 315 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 OR11H2Q8NH07 326 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 BAALCQ8WXS3 180 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 KIR2DL4Q99706 377 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 ZNF702PQ9H963 129 aa7.78□□□□□ -1.16
CD44-210ENST00000434472 TRGV11A0A075B6L2 103 aa7.77□□□□□ -1.17
CD44-210ENST00000434472 A0A1W2PPM0 123 aa7.77□□□□□ -1.17
CD44-210ENST00000434472 F5H697 171 aa7.77□□□□□ -1.17
CD44-210ENST00000434472 UFSP1Q6NVU6 142 aa7.77□□□□□ -1.17
CD44-210ENST00000434472 C10orf99Q6UWK7 81 aa7.77□□□□□ -1.17
CD44-210ENST00000434472 RNASE8Q8TDE3 154 aaKnown RBP7.77□□□□□ -1.17
CD44-210ENST00000434472 DOPEY1Q5JWR5 2465 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 PKD1L2Q7Z442 2459 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 TRAV2A0A0B4J234 112 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 MYMXA0A1B0GTQ4 84 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 PRSS29PA6NIE9 313 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 FABP2P12104 132 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 RIPPLY3P57055 190 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 ZFP2Q6ZN57 461 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 TIMM17AQ99595 171 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 TTTY13Q9BZ97 58 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 CST9LQ9H4G1 147 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 SELENOKQ9Y6D0 94 aa7.76□□□□□ -1.17
CD44-210ENST00000434472 TRBV27A0A0K0K1C4 114 aa7.75□□□□□ -1.17
CD44-210ENST00000434472 GAGE12BA1L429 117 aa7.75□□□□□ -1.17
CD44-210ENST00000434472 E9PLD3 99 aa7.75□□□□□ -1.17
CD44-210ENST00000434472 HOXD3P31249 432 aaPredicted RBP7.75□□□□□ -1.17
CD44-210ENST00000434472 FXYD2P54710 66 aa7.75□□□□□ -1.17
CD44-210ENST00000434472 HERVK_113P61574 105 aa7.75□□□□□ -1.17
CD44-210ENST00000434472 TRPT1Q86TN4 253 aaKnown RBP7.75□□□□□ -1.17
CD44-210ENST00000434472 MAPKAPK5-AS1Q8N8E1 139 aa7.75□□□□□ -1.17
CD44-210ENST00000434472 RAB37Q96AX2 223 aa7.75□□□□□ -1.17
CD44-210ENST00000434472 A0A087WWL8 130 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 RBX1P62877 108 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 RHOHQ15669 191 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 SAMD5Q5TGI4 173 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 Q8N2B8 174 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 WFDC12Q8WWY7 111 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 JMJD8Q96S16 334 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 TP53TG1Q9Y2A0 90 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 SDHAF1A6NFY7 115 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 IGIPA6NJ69 53 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 HOXA3O43365 443 aaPredicted RBP7.74□□□□□ -1.17
CD44-210ENST00000434472 IGKV3-20P01619 116 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 PMVKQ15126 192 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 DEFB113Q30KQ7 82 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 OCIAD2Q56VL3 154 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 TCTEX1D4Q5JR98 221 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms