RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TRAV4A0A0B4J268 109 aa10.9□□□□□ -0.66
TREX1-201ENST00000433541 P01737 135 aa10.9□□□□□ -0.66
TREX1-201ENST00000433541 LGALS9CQ6DKI2 356 aa10.9□□□□□ -0.66
TREX1-201ENST00000433541 ZNF479Q96JC4 524 aa10.9□□□□□ -0.66
TREX1-201ENST00000433541 SMIM7Q9BQ49 75 aa10.9□□□□□ -0.66
TREX1-201ENST00000433541 TRBV20OR9-2A0A075B6H5 130 aa10.89□□□□□ -0.67
TREX1-201ENST00000433541 M0R381 172 aa10.89□□□□□ -0.67
TREX1-201ENST00000433541 PAX4O43316 350 aa10.89□□□□□ -0.67
TREX1-201ENST00000433541 IGLV2-8P01709 118 aa10.89□□□□□ -0.67
TREX1-201ENST00000433541 PEA15Q15121 130 aa10.89□□□□□ -0.67
TREX1-201ENST00000433541 OR2D3Q8NGH3 330 aa10.89□□□□□ -0.67
TREX1-201ENST00000433541 TPPP3Q9BW30 176 aa10.89□□□□□ -0.67
TREX1-201ENST00000433541 IGHV3-73A0A0B4J1V6 119 aa10.88□□□□□ -0.67
TREX1-201ENST00000433541 XKRY2A2RUG3 117 aa10.88□□□□□ -0.67
TREX1-201ENST00000433541 ZNF727A8MUV8 499 aa10.88□□□□□ -0.67
TREX1-201ENST00000433541 SLAQ13239 276 aa10.88□□□□□ -0.67
TREX1-201ENST00000433541 PRO0255Q9UI72 69 aa10.88□□□□□ -0.67
TREX1-201ENST00000433541 HHLA3Q9XRX5 114 aa10.88□□□□□ -0.67
TREX1-201ENST00000433541 SRP19P09132 144 aaKnown RBP10.87□□□□□ -0.67
TREX1-201ENST00000433541 RPS20P60866 119 aaKnown RBP10.87□□□□□ -0.67
TREX1-201ENST00000433541 SSTP61278 116 aa10.87□□□□□ -0.67
TREX1-201ENST00000433541 FHL2Q14192 279 aa10.86□□□□□ -0.67
TREX1-201ENST00000433541 DNLZQ5SXM8 178 aa10.86□□□□□ -0.67
TREX1-201ENST00000433541 FAM74A4Q5TZK3 123 aa10.86□□□□□ -0.67
TREX1-201ENST00000433541 SPANXN1Q5VSR9 72 aa10.86□□□□□ -0.67
TREX1-201ENST00000433541 ZFP82Q8N141 532 aa10.86□□□□□ -0.67
TREX1-201ENST00000433541 OCC1Q8TAD7 63 aa10.86□□□□□ -0.67
TREX1-201ENST00000433541 ICOSQ9Y6W8 199 aa10.86□□□□□ -0.67
TREX1-201ENST00000433541 KMT2CQ8NEZ4 4911 aaKnown RBP10.85□□□□□ -0.67
TREX1-201ENST00000433541 MUC21A0A0G2JKD1 596 aa10.85□□□□□ -0.67
TREX1-201ENST00000433541 MUC21A0A140T8X8 626 aa10.85□□□□□ -0.67
TREX1-201ENST00000433541 A8MWV9 139 aa10.85□□□□□ -0.67
TREX1-201ENST00000433541 CXCL1P09341 107 aa10.85□□□□□ -0.67
TREX1-201ENST00000433541 GZMBP10144 247 aa10.85□□□□□ -0.67
TREX1-201ENST00000433541 CRYBA4P53673 196 aa10.85□□□□□ -0.67
TREX1-201ENST00000433541 CCL18P55774 89 aa10.85□□□□□ -0.67
TREX1-201ENST00000433541 CFAP126Q5VTH2 177 aa10.85□□□□□ -0.67
TREX1-201ENST00000433541 DMRTA1Q5VZB9 504 aa10.85□□□□□ -0.67
TREX1-201ENST00000433541 POM121L12Q8N7R1 296 aa10.85□□□□□ -0.67
TREX1-201ENST00000433541 DYNC2H1Q8NCM8 4307 aaKnown RBP10.85□□□□□ -0.67
TREX1-201ENST00000433541 C19orf71A6NCJ1 209 aa10.84□□□□□ -0.67
TREX1-201ENST00000433541 H3BNG1 76 aa10.84□□□□□ -0.67
TREX1-201ENST00000433541 K7EN84 100 aa10.84□□□□□ -0.67
TREX1-201ENST00000433541 RS1O15537 224 aa10.84□□□□□ -0.67
TREX1-201ENST00000433541 MED14OSP0DP75 135 aa10.84□□□□□ -0.67
TREX1-201ENST00000433541 PTH2Q96A98 100 aa10.84□□□□□ -0.67
TREX1-201ENST00000433541 VSIG2Q96IQ7 327 aa10.84□□□□□ -0.67
TREX1-201ENST00000433541 RNASE7Q9H1E1 156 aaKnown RBP10.84□□□□□ -0.67
TREX1-201ENST00000433541 ALMS1Q8TCU4 4167 aa10.84□□□□□ -0.67
TREX1-201ENST00000433541 PLECQ15149 4684 aaKnown RBP10.83□□□□□ -0.68
TREX1-201ENST00000433541 A0A096LPF7 62 aa10.83□□□□□ -0.68
TREX1-201ENST00000433541 CIDEAO60543 219 aa10.83□□□□□ -0.68
TREX1-201ENST00000433541 NDUFS6O75380 124 aaKnown RBP10.83□□□□□ -0.68
TREX1-201ENST00000433541 GYPEP15421 78 aa10.83□□□□□ -0.68
TREX1-201ENST00000433541 ERVFC1-1P60608 527 aa10.83□□□□□ -0.68
TREX1-201ENST00000433541 FER1L6-AS1Q8NA97 138 aa10.83□□□□□ -0.68
TREX1-201ENST00000433541 NUDT10Q8NFP7 164 aa10.83□□□□□ -0.68
TREX1-201ENST00000433541 OR10AG1Q8NH19 301 aa10.83□□□□□ -0.68
TREX1-201ENST00000433541 NUDT11Q96G61 164 aa10.83□□□□□ -0.68
TREX1-201ENST00000433541 LYSTQ99698 3801 aa10.83□□□□□ -0.68
TREX1-201ENST00000433541 PRADC1Q9BSG0 188 aa10.83□□□□□ -0.68
TREX1-201ENST00000433541 RPP21Q9H633 154 aaKnown RBP10.83□□□□□ -0.68
TREX1-201ENST00000433541 JPT2Q9H910 190 aa10.83□□□□□ -0.68
TREX1-201ENST00000433541 A0A087WWL8 130 aa10.82□□□□□ -0.68
TREX1-201ENST00000433541 GATCO43716 136 aaKnown RBP10.82□□□□□ -0.68
TREX1-201ENST00000433541 SRIP30626 198 aa10.82□□□□□ -0.68
TREX1-201ENST00000433541 SRSF3P84103 164 aaKnown RBP10.82□□□□□ -0.68
TREX1-201ENST00000433541 MRPL23Q16540 153 aaKnown RBP10.82□□□□□ -0.68
TREX1-201ENST00000433541 FAM74A3Q4VXF1 159 aa10.82□□□□□ -0.68
TREX1-201ENST00000433541 PIK3CD-AS1Q5SR53 167 aa10.82□□□□□ -0.68
TREX1-201ENST00000433541 RHODO00212 210 aa10.81□□□□□ -0.68
TREX1-201ENST00000433541 TMEM241Q24JQ0 296 aa10.81□□□□□ -0.68
TREX1-201ENST00000433541 RNF212Q495C1 297 aa10.81□□□□□ -0.68
TREX1-201ENST00000433541 SMDT1Q9H4I9 107 aa10.81□□□□□ -0.68
TREX1-201ENST00000433541 SCRT2Q9NQ03 307 aa10.81□□□□□ -0.68
TREX1-201ENST00000433541 LY96Q9Y6Y9 160 aa10.81□□□□□ -0.68
TREX1-201ENST00000433541 SNAI2O43623 268 aa10.8□□□□□ -0.68
TREX1-201ENST00000433541 OR5AL1P0C617 328 aa10.8□□□□□ -0.68
TREX1-201ENST00000433541 SMIM17P0DL12 118 aa10.8□□□□□ -0.68
TREX1-201ENST00000433541 GATA1P15976 413 aaPredicted RBP10.8□□□□□ -0.68
TREX1-201ENST00000433541 RHOHQ15669 191 aa10.8□□□□□ -0.68
TREX1-201ENST00000433541 ADIRFQ15847 76 aa10.8□□□□□ -0.68
TREX1-201ENST00000433541 SOHLH1Q5JUK2 328 aa10.8□□□□□ -0.68
TREX1-201ENST00000433541 LINC01551Q86U37 167 aa10.8□□□□□ -0.68
TREX1-201ENST00000433541 SFRP2Q96HF1 295 aa10.8□□□□□ -0.68
TREX1-201ENST00000433541 IGLV2-18A0A075B6J9 118 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 A0A1W2PPQ1 181 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 C9JQL5 133 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 ZNF56Q15929 161 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 CLLU1Q5K131 121 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 ZFP2Q6ZN57 461 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 NEGR1Q7Z3B1 354 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 ZNF575Q86XF7 245 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 C15orf54Q8N8G6 183 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 SLC25A29Q8N8R3 303 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 AP1S3Q96PC3 154 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 SAMD10Q9BYL1 202 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 NAT8Q9UHE5 227 aa10.79□□□□□ -0.68
TREX1-201ENST00000433541 LOC100131303A0A0U1RQF7 123 aa10.78□□□□□ -0.68
TREX1-201ENST00000433541 F5H697 171 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms