RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 RNF222A6NCQ9 220 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 PGPA6NDG6 321 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 A8MWV9 139 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 H3BS24 57 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 GNRH2O43555 120 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 TYMSP04818 313 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 PET100P0DJ07 73 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 UBE2L3P68036 154 aaKnown RBP5.48□□□□□ -1.53
CDH13-203ENST00000431540 SAPCD1Q5SSQ6 148 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 CFAP126Q5VTH2 177 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 Q6ZQT7 251 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 Q8TAT8 98 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 SCGB1C1Q8TD33 95 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 FAM30AQ9NZY2 134 aa5.48□□□□□ -1.53
CDH13-203ENST00000431540 TRAV6A0A075B6T7 132 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 A0A1W2PPV4 95 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 IGLV2-8P01709 118 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 FUSP35637 526 aaKnown RBP eCLIP5.47□□□□□ -1.53
CDH13-203ENST00000431540 Q0VG73 95 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 C14orf177Q52M58 125 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 DNLZQ5SXM8 178 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 THAP6Q8TBB0 222 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 SUN5Q8TC36 379 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 C9orf85Q96MD7 179 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 SEC22CQ9BRL7 303 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 CHAC1Q9BUX1 264 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 OR5AC2Q9NZP5 309 aa5.47□□□□□ -1.53
CDH13-203ENST00000431540 IGLV2-11P01706 119 aa5.46□□□□□ -1.54
CDH13-203ENST00000431540 ATRAIDQ6UW56 229 aa5.46□□□□□ -1.54
CDH13-203ENST00000431540 CYB561D1Q8N8Q1 229 aa5.46□□□□□ -1.54
CDH13-203ENST00000431540 C5orf17Q8NAS9 161 aa5.46□□□□□ -1.54
CDH13-203ENST00000431540 S100ZQ8WXG8 99 aa5.46□□□□□ -1.54
CDH13-203ENST00000431540 LOC100131303A0A0U1RQF7 123 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 RHODO00212 210 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 MBP02144 154 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 LINC00694P0DN24 101 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 PKIAP61925 76 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 SERF2P84101 59 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 ZFP69Q49AA0 526 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 SMUG1Q53HV7 270 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 FFAR4Q5NUL3 377 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 TVP23CQ96ET8 276 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 LINC00479Q96M42 142 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 NKX6-2Q9C056 277 aaPredicted RBP5.45□□□□□ -1.54
CDH13-203ENST00000431540 HSPB11Q9Y547 144 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 URGCP-MRPS24S4R325 110 aa5.45□□□□□ -1.54
CDH13-203ENST00000431540 TRBV10-1A0A0K0K1A3 114 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 FABP5P3A8MUU1 101 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 IGHV3-30P01768 117 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 IGHV3-33P01772 117 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 IGHV3-30-3P0DP02 117 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 IGHV3-30-5P0DP03 117 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 DGAT2L7PQ6IED9 249 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 GOLT1AQ6ZVE7 132 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 COX8CQ7Z4L0 72 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 OR2G3Q8NGZ4 309 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 HYLS1Q96M11 299 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 Q9HAA7 133 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 IL36BQ9NZH7 164 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 NAGKQ9UJ70 344 aa5.44□□□□□ -1.54
CDH13-203ENST00000431540 A0A1W2PRE2 83 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 RBFOX3A6NFN3 312 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 PGPEP1LA6NFU8 196 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 H0YIZ8 118 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 MPC2O95563 127 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 TCRAP04437 139 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 STAG3L2P0CL84 134 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 STAG3L3P0CL85 134 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 RNASE3P12724 160 aaKnown RBP5.43□□□□□ -1.54
CDH13-203ENST00000431540 RPL12P30050 165 aaKnown RBP5.43□□□□□ -1.54
CDH13-203ENST00000431540 KRTAP10-4P60372 401 aaPredicted RBP5.43□□□□□ -1.54
CDH13-203ENST00000431540 ZNF506Q5JVG8 444 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 UFSP1Q6NVU6 142 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 KCNIP4Q6PIL6 250 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 NIT1Q86X76 327 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 TMEM75Q8N9X5 138 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 PPP1R1CQ8WVI7 109 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 PSMG3Q9BT73 122 aaPredicted RBP5.43□□□□□ -1.54
CDH13-203ENST00000431540 TMEM167BQ9NRX6 74 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 PSG8Q9UQ74 426 aa5.43□□□□□ -1.54
CDH13-203ENST00000431540 GCGP01275 180 aa5.42□□□□□ -1.54
CDH13-203ENST00000431540 FLI1Q01543 452 aaPredicted RBP5.42□□□□□ -1.54
CDH13-203ENST00000431540 DPPA3Q6W0C5 159 aa5.42□□□□□ -1.54
CDH13-203ENST00000431540 SCXQ7RTU7 201 aa5.42□□□□□ -1.54
CDH13-203ENST00000431540 OR10G7Q8NGN6 311 aa5.42□□□□□ -1.54
CDH13-203ENST00000431540 MARVELD1Q9BSK0 173 aa5.42□□□□□ -1.54
CDH13-203ENST00000431540 PARLQ9H300 379 aa5.42□□□□□ -1.54
CDH13-203ENST00000431540 EPDR1Q9UM22 224 aa5.42□□□□□ -1.54
CDH13-203ENST00000431540 DNAH8Q96JB1 4490 aa5.41□□□□□ -1.54
CDH13-203ENST00000431540 CXorf1O96002 111 aa5.41□□□□□ -1.54
CDH13-203ENST00000431540 S100A4P26447 101 aaKnown RBP5.41□□□□□ -1.54
CDH13-203ENST00000431540 TMEM97Q5BJF2 176 aa5.41□□□□□ -1.54
CDH13-203ENST00000431540 DAZ4Q86SG3 579 aaKnown RBP5.41□□□□□ -1.54
CDH13-203ENST00000431540 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.41□□□□□ -1.54
CDH13-203ENST00000431540 CIRBP-AS1Q8TBR5 109 aa5.41□□□□□ -1.54
CDH13-203ENST00000431540 ENKURQ8TC29 256 aa5.41□□□□□ -1.54
CDH13-203ENST00000431540 DAZ3Q9NR90 486 aaKnown RBP5.41□□□□□ -1.54
CDH13-203ENST00000431540 TNFSF18Q9UNG2 199 aa5.41□□□□□ -1.54
CDH13-203ENST00000431540 PLA2G2DQ9UNK4 145 aa5.41□□□□□ -1.54
CDH13-203ENST00000431540 ZFP30Q9Y2G7 519 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms