RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 RERGLQ9H628 205 aa1.19□□□□□ -2.22
HMGB1P27-201ENST00000431429 NMNAT1Q9HAN9 279 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P27-201ENST00000431429 CMTM6Q9NX76 183 aa1.19□□□□□ -2.22
HMGB1P27-201ENST00000431429 SLC22A13Q9Y226 551 aa1.19□□□□□ -2.22
HMGB1P27-201ENST00000431429 UTP11Q9Y3A2 253 aaKnown RBP1.19□□□□□ -2.22
HMGB1P27-201ENST00000431429 MED31Q9Y3C7 131 aa1.19□□□□□ -2.22
HMGB1P27-201ENST00000431429 DNAJC15Q9Y5T4 150 aa1.19□□□□□ -2.22
HMGB1P27-201ENST00000431429 PKHD1P08F94 4074 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 HUWE1Q7Z6Z7 4374 aaKnown RBP1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 DEFB131BA0A096LNP1 70 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 TMEM269A0A1B0GVZ9 245 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 PQLC2LA1A4F0 135 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 H3BUA1 57 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 MRPS14O60783 128 aaKnown RBP1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 OR5F1O95221 314 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 CYB5AP00167 134 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 TTRP02766 147 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 SMR3BP02814 79 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 TSPAN19P0C672 248 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 MIFP14174 115 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 HLA-DMBP28068 263 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 HSD11B1P28845 292 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 ASIPP42127 132 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 CEBPGP53567 150 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 CCL18P55774 89 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 TPPP2P59282 170 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 RAB14P61106 215 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 GRK1Q15835 563 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 DEFB114Q30KQ6 69 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 GLT8D1Q68CQ7 371 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 HAGHLQ6PII5 290 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 Q8IYB0 196 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 CLECL1Q8IZS7 167 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 OR6V1Q8N148 313 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 PBOV1Q9GZY1 135 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 DPH3P1Q9H4G8 78 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 EFCAB1Q9HAE3 211 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 TPT1P8Q9HAU6 139 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 HMCN1Q96RW7 5635 aa1.18□□□□□ -2.22
HMGB1P27-201ENST00000431429 IGKV1D-43A0A0B4J1Z2 117 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 NBDYA0A0U1RRE5 68 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 TMEM189A5PLL7 270 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 SMIM9A6NGZ8 99 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 OR4C46A6NHA9 309 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 CPSF4LA6NMK7 179 aaKnown RBP1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 G3V318 75 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 H3BT86 120 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 H7C2G1 150 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 RPP14O95059 124 aaKnown RBP1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 HAND1O96004 215 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 NAPSAO96009 420 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 HLA-DRB1P01911 266 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 CD14P08571 375 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 SPART-AS1P0CW21 52 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 CBLN1P23435 193 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 NFYBP25208 207 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 MAGEA12P43365 314 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 HAAOP46952 286 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 CSN1S1P47710 185 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 OMPP47874 163 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 EMP1P54849 157 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 TAS2R41P59536 307 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 PSME3P61289 254 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 CDK6Q00534 326 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 EDDM3AQ14507 147 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 PLGLAQ15195 96 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 GLYATL3Q5SZD4 288 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 LPCAT3Q6P1A2 487 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 Q6ZS49 121 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 C9orf163Q8N9P6 203 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 AQP3Q92482 292 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 HSPB9Q9BQS6 159 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 TMEM70Q9BUB7 260 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 CHST6Q9GZX3 395 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 OR51V1Q9H2C8 321 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 IL36BQ9NZH7 164 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 FUT9Q9Y231 359 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 NUBP2Q9Y5Y2 271 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 LHFPL6Q9Y693 200 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 ALMS1Q8TCU4 4167 aa1.17□□□□□ -2.22
HMGB1P27-201ENST00000431429 TRBV20OR9-2A0A075B6H5 130 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 TRAV3A0A0B4J244 114 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 A0A1B0GW64 132 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 FAM223BA6NKX1 122 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 K7EP13 123 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 SLC22A1O15245 554 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 TPST1O60507 370 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 GGCTO75223 188 aaKnown RBP1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 ZNF737O75373 536 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 IGKV1-5P01602 117 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 C1QBP02746 253 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 PRM2P04554 102 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 CSN2P05814 226 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 IFI30P13284 250 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 IDO1P14902 403 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 S100A7P31151 101 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 G6PCP35575 357 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 RPL5P46777 297 aaKnown RBP1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 CTAG1AP78358 180 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms