RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 B4DEV8 164 aa8.74□□□□□ -1.01
USP40-205ENST00000430158 M0R036 132 aa8.74□□□□□ -1.01
USP40-205ENST00000430158 GAGE7O76087 117 aa8.74□□□□□ -1.01
USP40-205ENST00000430158 ORM1P02763 201 aa8.74□□□□□ -1.01
USP40-205ENST00000430158 CXCL1P09341 107 aa8.74□□□□□ -1.01
USP40-205ENST00000430158 GAGE12FP0CL80 117 aa8.74□□□□□ -1.01
USP40-205ENST00000430158 GAGE12GP0CL81 117 aa8.74□□□□□ -1.01
USP40-205ENST00000430158 GAGE12IP0CL82 117 aa8.74□□□□□ -1.01
USP40-205ENST00000430158 RPL19P84098 196 aaKnown RBP8.74□□□□□ -1.01
USP40-205ENST00000430158 M0R2P5 195 aa8.73□□□□□ -1.01
USP40-205ENST00000430158 HOXA5P20719 270 aa8.73□□□□□ -1.01
USP40-205ENST00000430158 OR5I1Q13606 314 aa8.73□□□□□ -1.01
USP40-205ENST00000430158 PEA15Q15121 130 aa8.73□□□□□ -1.01
USP40-205ENST00000430158 IL36BQ9NZH7 164 aa8.73□□□□□ -1.01
USP40-205ENST00000430158 APLNQ9ULZ1 77 aa8.73□□□□□ -1.01
USP40-205ENST00000430158 LY96Q9Y6Y9 160 aa8.73□□□□□ -1.01
USP40-205ENST00000430158 GRIFINA4D1Z8 144 aa8.72□□□□□ -1.01
USP40-205ENST00000430158 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
USP40-205ENST00000430158 ATP5G1P05496 136 aa8.72□□□□□ -1.01
USP40-205ENST00000430158 RAB14P61106 215 aa8.72□□□□□ -1.01
USP40-205ENST00000430158 PRR27Q6MZM9 219 aa8.72□□□□□ -1.01
USP40-205ENST00000430158 SMIM7Q9BQ49 75 aa8.72□□□□□ -1.01
USP40-205ENST00000430158 SSBP4Q9BWG4 385 aaPredicted RBP8.72□□□□□ -1.01
USP40-205ENST00000430158 DNAH6Q9C0G6 4158 aa8.72□□□□□ -1.01
USP40-205ENST00000430158 TMSB15BA0A087X1C1 80 aa8.71□□□□□ -1.02
USP40-205ENST00000430158 ARMS2P0C7Q2 107 aa8.71□□□□□ -1.02
USP40-205ENST00000430158 MED14OSP0DP75 135 aa8.71□□□□□ -1.02
USP40-205ENST00000430158 MGST1P10620 155 aaKnown RBP8.71□□□□□ -1.02
USP40-205ENST00000430158 ASIPP42127 132 aa8.71□□□□□ -1.02
USP40-205ENST00000430158 PIK3CD-AS1Q5SR53 167 aa8.71□□□□□ -1.02
USP40-205ENST00000430158 LINC01551Q86U37 167 aa8.71□□□□□ -1.02
USP40-205ENST00000430158 NUDT10Q8NFP7 164 aa8.71□□□□□ -1.02
USP40-205ENST00000430158 NUDT11Q96G61 164 aa8.71□□□□□ -1.02
USP40-205ENST00000430158 KLK5Q9Y337 293 aaPredicted RBP8.71□□□□□ -1.02
USP40-205ENST00000430158 RYR2Q92736 4967 aa8.71□□□□□ -1.02
USP40-205ENST00000430158 IGHV4-4A0A075B6R2 117 aa8.7□□□□□ -1.02
USP40-205ENST00000430158 ZNF727A8MUV8 499 aa8.7□□□□□ -1.02
USP40-205ENST00000430158 H3BVH4 76 aa8.7□□□□□ -1.02
USP40-205ENST00000430158 SNAI2O43623 268 aa8.7□□□□□ -1.02
USP40-205ENST00000430158 IGLC6P0CF74 106 aa8.7□□□□□ -1.02
USP40-205ENST00000430158 CEBPGP53567 150 aa8.7□□□□□ -1.02
USP40-205ENST00000430158 FHL2Q14192 279 aa8.7□□□□□ -1.02
USP40-205ENST00000430158 FAM74A3Q4VXF1 159 aa8.7□□□□□ -1.02
USP40-205ENST00000430158 FAM210BQ96KR6 192 aa8.7□□□□□ -1.02
USP40-205ENST00000430158 NDUFAF3Q9BU61 184 aa8.7□□□□□ -1.02
USP40-205ENST00000430158 BIN3Q9NQY0 253 aa8.7□□□□□ -1.02
USP40-205ENST00000430158 KMT2AQ03164 3969 aa8.69□□□□□ -1.02
USP40-205ENST00000430158 TRGV2A0A075B6R0 118 aa8.69□□□□□ -1.02
USP40-205ENST00000430158 IGLL5B9A064 214 aa8.69□□□□□ -1.02
USP40-205ENST00000430158 RS1O15537 224 aa8.69□□□□□ -1.02
USP40-205ENST00000430158 NXPH4O95158 308 aa8.69□□□□□ -1.02
USP40-205ENST00000430158 HTN3P15516 51 aa8.69□□□□□ -1.02
USP40-205ENST00000430158 ZNF876PQ49A33 203 aa8.69□□□□□ -1.02
USP40-205ENST00000430158 UFSP1Q6NVU6 142 aa8.69□□□□□ -1.02
USP40-205ENST00000430158 FAM231DQ6ZW35 169 aa8.69□□□□□ -1.02
USP40-205ENST00000430158 VSIG2Q96IQ7 327 aa8.69□□□□□ -1.02
USP40-205ENST00000430158 ZNF479Q96JC4 524 aa8.69□□□□□ -1.02
USP40-205ENST00000430158 RNASE7Q9H1E1 156 aaKnown RBP8.69□□□□□ -1.02
USP40-205ENST00000430158 TRAV4A0A0B4J268 109 aa8.68□□□□□ -1.02
USP40-205ENST00000430158 F5H768 121 aa8.68□□□□□ -1.02
USP40-205ENST00000430158 OR5AL1P0C617 328 aa8.68□□□□□ -1.02
USP40-205ENST00000430158 GZMBP10144 247 aa8.68□□□□□ -1.02
USP40-205ENST00000430158 S100A4P26447 101 aaKnown RBP8.68□□□□□ -1.02
USP40-205ENST00000430158 TCTAP57738 103 aa8.68□□□□□ -1.02
USP40-205ENST00000430158 CFAP126Q5VTH2 177 aa8.68□□□□□ -1.02
USP40-205ENST00000430158 TMEM88Q6PEY1 159 aa8.68□□□□□ -1.02
USP40-205ENST00000430158 OR2D3Q8NGH3 330 aa8.68□□□□□ -1.02
USP40-205ENST00000430158 LINC00862A6NCI5 91 aa8.67□□□□□ -1.02
USP40-205ENST00000430158 P01737 135 aa8.67□□□□□ -1.02
USP40-205ENST00000430158 IGHV3-53P01767 116 aa8.67□□□□□ -1.02
USP40-205ENST00000430158 SFTA3P0C7M3 94 aa8.67□□□□□ -1.02
USP40-205ENST00000430158 RPS20P60866 119 aaKnown RBP8.67□□□□□ -1.02
USP40-205ENST00000430158 RPL23P62829 140 aaKnown RBP8.67□□□□□ -1.02
USP40-205ENST00000430158 TMEM241Q24JQ0 296 aa8.67□□□□□ -1.02
USP40-205ENST00000430158 SOHLH1Q5JUK2 328 aa8.67□□□□□ -1.02
USP40-205ENST00000430158 OR10AG1Q8NH19 301 aa8.67□□□□□ -1.02
USP40-205ENST00000430158 DAZAP1Q96EP5 407 aaKnown RBP8.67□□□□□ -1.02
USP40-205ENST00000430158 JPT2Q9H910 190 aa8.67□□□□□ -1.02
USP40-205ENST00000430158 HYDINQ4G0P3 5121 aa8.66□□□□□ -1.02
USP40-205ENST00000430158 H3BNG1 76 aa8.66□□□□□ -1.02
USP40-205ENST00000430158 ISOC2Q96AB3 205 aa8.66□□□□□ -1.02
USP40-205ENST00000430158 RPP21Q9H633 154 aaKnown RBP8.66□□□□□ -1.02
USP40-205ENST00000430158 OSTCQ9NRP0 149 aa8.66□□□□□ -1.02
USP40-205ENST00000430158 NAT8Q9UHE5 227 aa8.66□□□□□ -1.02
USP40-205ENST00000430158 RYR3Q15413 4870 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 TRAV26-1A0A087WT03 109 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 LCE6AA0A183 80 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 CRYGDP07320 174 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 GATA1P15976 413 aaPredicted RBP8.65□□□□□ -1.02
USP40-205ENST00000430158 CRYBA4P53673 196 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 CT83Q5H943 113 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 Q6ZSN1 163 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 OR4C5Q8NGB2 326 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 GTSF1Q8WW33 167 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 SFRP2Q96HF1 295 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 SAMD10Q9BYL1 202 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 PHLDA3Q9Y5J5 127 aa8.65□□□□□ -1.02
USP40-205ENST00000430158 MUC21A0A0G2JKD1 596 aa8.64□□□□□ -1.03
USP40-205ENST00000430158 MUC21A0A140T8X8 626 aa8.64□□□□□ -1.03
USP40-205ENST00000430158 CTRLP40313 264 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms