RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SMR3BP02814 79 aaPredicted RBP9.95□□□□□ -0.82
MSH5-208ENST00000429846 SAPCD1Q5SSQ6 148 aa9.95□□□□□ -0.82
MSH5-208ENST00000429846 Q6ZSN1 163 aa9.95□□□□□ -0.82
MSH5-208ENST00000429846 TM2D2Q9BX73 214 aa9.95□□□□□ -0.82
MSH5-208ENST00000429846 IGHV3-73A0A0B4J1V6 119 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 PGPEP1LA6NFU8 196 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 A6NHS1 94 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 GGTLC3B5MD39 225 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 CXorf1O96002 111 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 IGHV3-33P01772 117 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 C1QBP02746 253 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 IGHV3-30-3P0DP02 117 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 RNASE3P12724 160 aaKnown RBP9.94□□□□□ -0.82
MSH5-208ENST00000429846 SUMO1P63165 101 aaKnown RBP9.94□□□□□ -0.82
MSH5-208ENST00000429846 ZFP2Q6ZN57 461 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 AQP10Q96PS8 301 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 EPDR1Q9UM22 224 aa9.94□□□□□ -0.82
MSH5-208ENST00000429846 HERC1Q15751 4861 aa9.93□□□□□ -0.82
MSH5-208ENST00000429846 A8MWV9 139 aa9.93□□□□□ -0.82
MSH5-208ENST00000429846 ATP6V0CP27449 155 aa9.93□□□□□ -0.82
MSH5-208ENST00000429846 PRNTQ86SH4 94 aa9.93□□□□□ -0.82
MSH5-208ENST00000429846 TNFSF18Q9UNG2 199 aa9.93□□□□□ -0.82
MSH5-208ENST00000429846 FLG2Q5D862 2391 aaPredicted RBP9.93□□□□□ -0.82
MSH5-208ENST00000429846 A0A1W2PRE2 83 aa9.92□□□□□ -0.82
MSH5-208ENST00000429846 LINC00694P0DN24 101 aa9.92□□□□□ -0.82
MSH5-208ENST00000429846 S100A4P26447 101 aaKnown RBP9.92□□□□□ -0.82
MSH5-208ENST00000429846 TOR2AQ5JU69 321 aa9.92□□□□□ -0.82
MSH5-208ENST00000429846 ACTR3CQ9C0K3 210 aaPredicted RBP9.92□□□□□ -0.82
MSH5-208ENST00000429846 PARLQ9H300 379 aa9.92□□□□□ -0.82
MSH5-208ENST00000429846 TRAV8-3A0A0A6YYJ7 113 aa9.91□□□□□ -0.82
MSH5-208ENST00000429846 ASIPP42127 132 aa9.91□□□□□ -0.82
MSH5-208ENST00000429846 ALG5Q9Y673 324 aa9.91□□□□□ -0.82
MSH5-208ENST00000429846 VPS13BQ7Z7G8 4022 aa9.91□□□□□ -0.82
MSH5-208ENST00000429846 SRRM2Q9UQ35 2752 aaKnown RBP9.91□□□□□ -0.82
MSH5-208ENST00000429846 FAT1Q14517 4588 aa9.9□□□□□ -0.82
MSH5-208ENST00000429846 A0A087WWC5 75 aa9.9□□□□□ -0.82
MSH5-208ENST00000429846 FGF8P55075 233 aaPredicted RBP9.9□□□□□ -0.82
MSH5-208ENST00000429846 HAMPP81172 84 aa9.9□□□□□ -0.82
MSH5-208ENST00000429846 COX11Q9Y6N1 276 aa9.9□□□□□ -0.82
MSH5-208ENST00000429846 IGKV3D-20A0A0C4DH25 116 aa9.89□□□□□ -0.83
MSH5-208ENST00000429846 GAGE12JA6NER3 117 aa9.89□□□□□ -0.83
MSH5-208ENST00000429846 FABP5P3A8MUU1 101 aa9.89□□□□□ -0.83
MSH5-208ENST00000429846 RHODO00212 210 aa9.89□□□□□ -0.83
MSH5-208ENST00000429846 GAGE1Q13065 139 aa9.89□□□□□ -0.83
MSH5-208ENST00000429846 GAGE4Q13068 117 aa9.89□□□□□ -0.83
MSH5-208ENST00000429846 GAGE5Q13069 117 aa9.89□□□□□ -0.83
MSH5-208ENST00000429846 LGALSLQ3ZCW2 172 aaPredicted RBP9.89□□□□□ -0.83
MSH5-208ENST00000429846 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
MSH5-208ENST00000429846 LINC00479Q96M42 142 aa9.89□□□□□ -0.83
MSH5-208ENST00000429846 IL36BQ9NZH7 164 aa9.89□□□□□ -0.83
MSH5-208ENST00000429846 ARL2-SNX15V9GYD0 113 aa9.89□□□□□ -0.83
MSH5-208ENST00000429846 SEC11BP0C7V7 166 aa9.88□□□□□ -0.83
MSH5-208ENST00000429846 UFSP1Q6NVU6 142 aa9.88□□□□□ -0.83
MSH5-208ENST00000429846 Q6ZSA8 131 aa9.88□□□□□ -0.83
MSH5-208ENST00000429846 SYT8Q8NBV8 401 aa9.88□□□□□ -0.83
MSH5-208ENST00000429846 NKX6-2Q9C056 277 aaPredicted RBP9.88□□□□□ -0.83
MSH5-208ENST00000429846 MED28Q9H204 178 aa9.88□□□□□ -0.83
MSH5-208ENST00000429846 MYCBP2O75592 4640 aa9.87□□□□□ -0.83
MSH5-208ENST00000429846 BORCS7-ASMTA0A0B4J1R7 106 aa9.87□□□□□ -0.83
MSH5-208ENST00000429846 CTXND1A0A1B0GTU2 59 aa9.87□□□□□ -0.83
MSH5-208ENST00000429846 B4DEV8 164 aa9.87□□□□□ -0.83
MSH5-208ENST00000429846 PTTG1O95997 202 aa9.87□□□□□ -0.83
MSH5-208ENST00000429846 IFNA7P01567 189 aa9.87□□□□□ -0.83
MSH5-208ENST00000429846 DNLZQ5SXM8 178 aa9.87□□□□□ -0.83
MSH5-208ENST00000429846 Q86TA4 180 aa9.87□□□□□ -0.83
MSH5-208ENST00000429846 INO80EQ8NBZ0 244 aaPredicted RBP9.87□□□□□ -0.83
MSH5-208ENST00000429846 HIST1H2BAQ96A08 127 aa9.87□□□□□ -0.83
MSH5-208ENST00000429846 RMI2Q96E14 147 aa9.87□□□□□ -0.83
MSH5-208ENST00000429846 FAM30AQ9NZY2 134 aa9.87□□□□□ -0.83
MSH5-208ENST00000429846 TRAV34A0A0B4J273 112 aa9.86□□□□□ -0.83
MSH5-208ENST00000429846 PEX7O00628 323 aa9.86□□□□□ -0.83
MSH5-208ENST00000429846 PLA2G1BP04054 148 aaKnown RBP9.86□□□□□ -0.83
MSH5-208ENST00000429846 WFDC2Q14508 124 aa9.86□□□□□ -0.83
MSH5-208ENST00000429846 Q8N3U1 123 aa9.86□□□□□ -0.83
MSH5-208ENST00000429846 OR2T35Q8NGX2 323 aa9.86□□□□□ -0.83
MSH5-208ENST00000429846 URGCP-MRPS24S4R325 110 aa9.86□□□□□ -0.83
MSH5-208ENST00000429846 H3BVH4 76 aa9.85□□□□□ -0.83
MSH5-208ENST00000429846 GIPP09681 153 aaPredicted RBP9.85□□□□□ -0.83
MSH5-208ENST00000429846 RPL7L1Q6DKI1 246 aaKnown RBP9.85□□□□□ -0.83
MSH5-208ENST00000429846 COX8CQ7Z4L0 72 aa9.85□□□□□ -0.83
MSH5-208ENST00000429846 DAZ4Q86SG3 579 aaKnown RBP9.85□□□□□ -0.83
MSH5-208ENST00000429846 DAZ3Q9NR90 486 aaKnown RBP9.85□□□□□ -0.83
MSH5-208ENST00000429846 ZFP30Q9Y2G7 519 aa9.85□□□□□ -0.83
MSH5-208ENST00000429846 RNF222A6NCQ9 220 aa9.84□□□□□ -0.83
MSH5-208ENST00000429846 ZNF726P1Q15940 193 aa9.84□□□□□ -0.83
MSH5-208ENST00000429846 DMRTA1Q5VZB9 504 aa9.84□□□□□ -0.83
MSH5-208ENST00000429846 C14orf178Q8N769 122 aaPredicted RBP9.84□□□□□ -0.83
MSH5-208ENST00000429846 OR11H4Q8NGC9 324 aa9.84□□□□□ -0.83
MSH5-208ENST00000429846 CHCHD7Q9BUK0 85 aa9.84□□□□□ -0.83
MSH5-208ENST00000429846 SAMD10Q9BYL1 202 aa9.84□□□□□ -0.83
MSH5-208ENST00000429846 JPT2Q9H910 190 aa9.84□□□□□ -0.83
MSH5-208ENST00000429846 FAM74A7A6NL05 159 aa9.83□□□□□ -0.84
MSH5-208ENST00000429846 KRBOX1C9JBD0 128 aa9.83□□□□□ -0.84
MSH5-208ENST00000429846 ARMS2P0C7Q2 107 aa9.83□□□□□ -0.84
MSH5-208ENST00000429846 UBE2G2P60604 165 aa9.83□□□□□ -0.84
MSH5-208ENST00000429846 FAM74A4Q5TZK3 123 aa9.83□□□□□ -0.84
MSH5-208ENST00000429846 NIT1Q86X76 327 aa9.83□□□□□ -0.84
MSH5-208ENST00000429846 ZC2HC1AQ96GY0 325 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms