RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 ZNF876PQ49A33 203 aa10.54□□□□□ -0.72
GARNL3-204ENST00000429629 CSMD3Q7Z407 3707 aa10.54□□□□□ -0.72
GARNL3-204ENST00000429629 TRAV4A0A0B4J268 109 aa10.53□□□□□ -0.72
GARNL3-204ENST00000429629 SNAI2O43623 268 aa10.53□□□□□ -0.72
GARNL3-204ENST00000429629 CEBPGP53567 150 aa10.53□□□□□ -0.72
GARNL3-204ENST00000429629 SOHLH1Q5JUK2 328 aa10.53□□□□□ -0.72
GARNL3-204ENST00000429629 UQCC3Q6UW78 93 aa10.53□□□□□ -0.72
GARNL3-204ENST00000429629 LINC01551Q86U37 167 aa10.53□□□□□ -0.72
GARNL3-204ENST00000429629 NUDT10Q8NFP7 164 aa10.53□□□□□ -0.72
GARNL3-204ENST00000429629 NUDT11Q96G61 164 aa10.53□□□□□ -0.72
GARNL3-204ENST00000429629 MRPL16Q9NX20 251 aaKnown RBP10.53□□□□□ -0.72
GARNL3-204ENST00000429629 A8MWV9 139 aa10.52□□□□□ -0.73
GARNL3-204ENST00000429629 IGLL5B9A064 214 aa10.52□□□□□ -0.73
GARNL3-204ENST00000429629 F2Z2F3 143 aa10.52□□□□□ -0.73
GARNL3-204ENST00000429629 C15orf53Q8NAA6 179 aa10.52□□□□□ -0.73
GARNL3-204ENST00000429629 SYT8Q8NBV8 401 aa10.52□□□□□ -0.73
GARNL3-204ENST00000429629 OR2D3Q8NGH3 330 aa10.52□□□□□ -0.73
GARNL3-204ENST00000429629 NAT8Q9UHE5 227 aa10.52□□□□□ -0.73
GARNL3-204ENST00000429629 APLNQ9ULZ1 77 aa10.52□□□□□ -0.73
GARNL3-204ENST00000429629 IGHV4-4A0A075B6R2 117 aa10.51□□□□□ -0.73
GARNL3-204ENST00000429629 A0A1W2PPQ1 181 aa10.51□□□□□ -0.73
GARNL3-204ENST00000429629 GRIFINA4D1Z8 144 aa10.51□□□□□ -0.73
GARNL3-204ENST00000429629 F5H768 121 aa10.51□□□□□ -0.73
GARNL3-204ENST00000429629 RS1O15537 224 aa10.51□□□□□ -0.73
GARNL3-204ENST00000429629 CT83Q5H943 113 aa10.51□□□□□ -0.73
GARNL3-204ENST00000429629 WDR73Q6P4I2 378 aa10.51□□□□□ -0.73
GARNL3-204ENST00000429629 ZFP2Q6ZN57 461 aa10.51□□□□□ -0.73
GARNL3-204ENST00000429629 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
GARNL3-204ENST00000429629 OSTCQ9NRP0 149 aa10.51□□□□□ -0.73
GARNL3-204ENST00000429629 PHLDA3Q9Y5J5 127 aa10.51□□□□□ -0.73
GARNL3-204ENST00000429629 TMSB15BA0A087X1C1 80 aa10.5□□□□□ -0.73
GARNL3-204ENST00000429629 H3BVH4 76 aa10.5□□□□□ -0.73
GARNL3-204ENST00000429629 NXPH4O95158 308 aa10.5□□□□□ -0.73
GARNL3-204ENST00000429629 IGLC6P0CF74 106 aa10.5□□□□□ -0.73
GARNL3-204ENST00000429629 HTN3P15516 51 aa10.5□□□□□ -0.73
GARNL3-204ENST00000429629 RPL19P84098 196 aaKnown RBP10.5□□□□□ -0.73
GARNL3-204ENST00000429629 FHL2Q14192 279 aa10.5□□□□□ -0.73
GARNL3-204ENST00000429629 ZFP82Q8N141 532 aa10.5□□□□□ -0.73
GARNL3-204ENST00000429629 OR4C5Q8NGB2 326 aa10.5□□□□□ -0.73
GARNL3-204ENST00000429629 RPP21Q9H633 154 aaKnown RBP10.5□□□□□ -0.73
GARNL3-204ENST00000429629 PRO0255Q9UI72 69 aa10.5□□□□□ -0.73
GARNL3-204ENST00000429629 STARD9Q9P2P6 4700 aa10.49□□□□□ -0.73
GARNL3-204ENST00000429629 LINC00862A6NCI5 91 aa10.49□□□□□ -0.73
GARNL3-204ENST00000429629 FAM231BA6NCW3 169 aa10.49□□□□□ -0.73
GARNL3-204ENST00000429629 A8MWL6 223 aa10.49□□□□□ -0.73
GARNL3-204ENST00000429629 HOXA5P20719 270 aa10.49□□□□□ -0.73
GARNL3-204ENST00000429629 FOXA3P55318 350 aaPredicted RBP10.49□□□□□ -0.73
GARNL3-204ENST00000429629 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
GARNL3-204ENST00000429629 DMRTA1Q5VZB9 504 aa10.49□□□□□ -0.73
GARNL3-204ENST00000429629 TMEM88Q6PEY1 159 aa10.49□□□□□ -0.73
GARNL3-204ENST00000429629 RNASE7Q9H1E1 156 aaKnown RBP10.49□□□□□ -0.73
GARNL3-204ENST00000429629 HHLA3Q9XRX5 114 aa10.49□□□□□ -0.73
GARNL3-204ENST00000429629 TENM2Q9NT68 2774 aa10.48□□□□□ -0.73
GARNL3-204ENST00000429629 GATCO43716 136 aaKnown RBP10.48□□□□□ -0.73
GARNL3-204ENST00000429629 ERVFC1-1P60608 527 aa10.48□□□□□ -0.73
GARNL3-204ENST00000429629 RPL23P62829 140 aaKnown RBP10.48□□□□□ -0.73
GARNL3-204ENST00000429629 FER1L6-AS1Q8NA97 138 aa10.48□□□□□ -0.73
GARNL3-204ENST00000429629 ISOC2Q96AB3 205 aa10.48□□□□□ -0.73
GARNL3-204ENST00000429629 SFRP2Q96HF1 295 aa10.48□□□□□ -0.73
GARNL3-204ENST00000429629 ZNF479Q96JC4 524 aa10.48□□□□□ -0.73
GARNL3-204ENST00000429629 PLECQ15149 4684 aaKnown RBP10.47□□□□□ -0.73
GARNL3-204ENST00000429629 RHODO00212 210 aa10.47□□□□□ -0.73
GARNL3-204ENST00000429629 CRYBA4P53673 196 aa10.47□□□□□ -0.73
GARNL3-204ENST00000429629 CACNG7P62955 275 aa10.47□□□□□ -0.73
GARNL3-204ENST00000429629 PNRC1Q12796 327 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-204ENST00000429629 C15orf54Q8N8G6 183 aa10.47□□□□□ -0.73
GARNL3-204ENST00000429629 CNFNQ9BYD5 112 aa10.47□□□□□ -0.73
GARNL3-204ENST00000429629 GFRA4Q9GZZ7 299 aa10.47□□□□□ -0.73
GARNL3-204ENST00000429629 TRAV26-1A0A087WT03 109 aa10.46□□□□□ -0.73
GARNL3-204ENST00000429629 TRGV4A0A0C4DH28 118 aa10.46□□□□□ -0.73
GARNL3-204ENST00000429629 TRBV6-4A0A1B0GX49 114 aa10.46□□□□□ -0.73
GARNL3-204ENST00000429629 SFTA3P0C7M3 94 aa10.46□□□□□ -0.73
GARNL3-204ENST00000429629 LGALS9CQ6DKI2 356 aa10.46□□□□□ -0.73
GARNL3-204ENST00000429629 UFSP1Q6NVU6 142 aa10.46□□□□□ -0.73
GARNL3-204ENST00000429629 VSIG2Q96IQ7 327 aa10.46□□□□□ -0.73
GARNL3-204ENST00000429629 GATA1P15976 413 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-204ENST00000429629 CTRLP40313 264 aa10.45□□□□□ -0.74
GARNL3-204ENST00000429629 SPANXN1Q5VSR9 72 aa10.45□□□□□ -0.74
GARNL3-204ENST00000429629 OR10AG1Q8NH19 301 aa10.45□□□□□ -0.74
GARNL3-204ENST00000429629 TMEM218A2RU14 115 aa10.44□□□□□ -0.74
GARNL3-204ENST00000429629 M0R381 172 aa10.44□□□□□ -0.74
GARNL3-204ENST00000429629 PAX4O43316 350 aa10.44□□□□□ -0.74
GARNL3-204ENST00000429629 IGHV3-53P01767 116 aa10.44□□□□□ -0.74
GARNL3-204ENST00000429629 CRYGDP07320 174 aa10.44□□□□□ -0.74
GARNL3-204ENST00000429629 P0DMU3 169 aa10.44□□□□□ -0.74
GARNL3-204ENST00000429629 FAM231AP0DMU4 169 aa10.44□□□□□ -0.74
GARNL3-204ENST00000429629 FAM231CP0DMU5 169 aa10.44□□□□□ -0.74
GARNL3-204ENST00000429629 TSKUQ8WUA8 353 aa10.44□□□□□ -0.74
GARNL3-204ENST00000429629 LCE6AA0A183 80 aa10.43□□□□□ -0.74
GARNL3-204ENST00000429629 GZMBP10144 247 aa10.43□□□□□ -0.74
GARNL3-204ENST00000429629 FAM3BP58499 235 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-204ENST00000429629 ADIRFQ15847 76 aa10.43□□□□□ -0.74
GARNL3-204ENST00000429629 RNF212Q495C1 297 aa10.43□□□□□ -0.74
GARNL3-204ENST00000429629 LYZL1Q6UWQ5 148 aa10.43□□□□□ -0.74
GARNL3-204ENST00000429629 SH2D6Q7Z4S9 175 aa10.43□□□□□ -0.74
GARNL3-204ENST00000429629 OR10G8Q8NGN5 311 aa10.43□□□□□ -0.74
GARNL3-204ENST00000429629 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
GARNL3-204ENST00000429629 V9GYV3 84 aa10.43□□□□□ -0.74
GARNL3-204ENST00000429629 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
GARNL3-204ENST00000429629 COMMD7Q86VX2 200 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms