RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 C9orf85Q96MD7 179 aa13.14□□□□□ -0.31
COL9A2-204ENST00000427563 PCLOQ9Y6V0 5065 aa13.14□□□□□ -0.31
COL9A2-204ENST00000427563 TRGV4A0A0C4DH28 118 aa13.13□□□□□ -0.31
COL9A2-204ENST00000427563 Q86TA4 180 aa13.13□□□□□ -0.31
COL9A2-204ENST00000427563 C11orf52Q96A22 123 aa13.13□□□□□ -0.31
COL9A2-204ENST00000427563 IGKV3D-20A0A0C4DH25 116 aa13.12□□□□□ -0.31
COL9A2-204ENST00000427563 LOC100131303A0A0U1RQF7 123 aa13.12□□□□□ -0.31
COL9A2-204ENST00000427563 RBFOX3A6NFN3 312 aa13.12□□□□□ -0.31
COL9A2-204ENST00000427563 FBLL1A6NHQ2 334 aaKnown RBP13.12□□□□□ -0.31
COL9A2-204ENST00000427563 K7EQD1 137 aa13.12□□□□□ -0.31
COL9A2-204ENST00000427563 RNASE3P12724 160 aaKnown RBP13.12□□□□□ -0.31
COL9A2-204ENST00000427563 AKR1C3P42330 323 aa13.12□□□□□ -0.31
COL9A2-204ENST00000427563 RAB14P61106 215 aa13.12□□□□□ -0.31
COL9A2-204ENST00000427563 SLAQ13239 276 aa13.12□□□□□ -0.31
COL9A2-204ENST00000427563 ZNF506Q5JVG8 444 aa13.12□□□□□ -0.31
COL9A2-204ENST00000427563 LYPD5Q6UWN5 251 aa13.12□□□□□ -0.31
COL9A2-204ENST00000427563 FAM210AQ96ND0 272 aa13.12□□□□□ -0.31
COL9A2-204ENST00000427563 CRIP1P50238 77 aa13.11□□□□□ -0.31
COL9A2-204ENST00000427563 TOR2AQ5JU69 321 aa13.11□□□□□ -0.31
COL9A2-204ENST00000427563 CLLU1Q5K131 121 aa13.11□□□□□ -0.31
COL9A2-204ENST00000427563 SAPCD1Q5SSQ6 148 aa13.11□□□□□ -0.31
COL9A2-204ENST00000427563 OR4C5Q8NGB2 326 aa13.11□□□□□ -0.31
COL9A2-204ENST00000427563 LRP1BQ9NZR2 4599 aa13.1□□□□□ -0.31
COL9A2-204ENST00000427563 PGPEP1LA6NFU8 196 aa13.1□□□□□ -0.31
COL9A2-204ENST00000427563 PDE6DO43924 150 aa13.1□□□□□ -0.31
COL9A2-204ENST00000427563 NXPH4O95158 308 aa13.1□□□□□ -0.31
COL9A2-204ENST00000427563 GYPEP15421 78 aa13.1□□□□□ -0.31
COL9A2-204ENST00000427563 MRPL23Q16540 153 aaKnown RBP13.1□□□□□ -0.31
COL9A2-204ENST00000427563 ZNF575Q86XF7 245 aa13.1□□□□□ -0.31
COL9A2-204ENST00000427563 TRBV6-1A0A0K0K1D8 114 aa13.09□□□□□ -0.31
COL9A2-204ENST00000427563 C9JCJ5 164 aa13.09□□□□□ -0.31
COL9A2-204ENST00000427563 GATA1P15976 413 aaPredicted RBP13.09□□□□□ -0.31
COL9A2-204ENST00000427563 TTC32Q5I0X7 151 aa13.09□□□□□ -0.31
COL9A2-204ENST00000427563 ZC2HC1AQ96GY0 325 aa13.09□□□□□ -0.31
COL9A2-204ENST00000427563 FMC1Q96HJ9 113 aa13.09□□□□□ -0.31
COL9A2-204ENST00000427563 DNAH5Q8TE73 4624 aa13.08□□□□□ -0.32
COL9A2-204ENST00000427563 A0A1W2PPQ1 181 aa13.08□□□□□ -0.32
COL9A2-204ENST00000427563 RS1O15537 224 aa13.08□□□□□ -0.32
COL9A2-204ENST00000427563 UBE2G1P62253 170 aa13.08□□□□□ -0.32
COL9A2-204ENST00000427563 ZNF876PQ49A33 203 aa13.08□□□□□ -0.32
COL9A2-204ENST00000427563 CFAP126Q5VTH2 177 aa13.08□□□□□ -0.32
COL9A2-204ENST00000427563 NEGR1Q7Z3B1 354 aa13.08□□□□□ -0.32
COL9A2-204ENST00000427563 COX8CQ7Z4L0 72 aa13.08□□□□□ -0.32
COL9A2-204ENST00000427563 EIF5A2Q9GZV4 153 aaKnown RBP13.08□□□□□ -0.32
COL9A2-204ENST00000427563 RYR1P21817 5038 aa13.08□□□□□ -0.32
COL9A2-204ENST00000427563 S100A9P06702 114 aaKnown RBP13.07□□□□□ -0.32
COL9A2-204ENST00000427563 Q6ZRN7 208 aaPredicted RBP13.07□□□□□ -0.32
COL9A2-204ENST00000427563 PTH2Q96A98 100 aa13.07□□□□□ -0.32
COL9A2-204ENST00000427563 DERL1Q9BUN8 251 aa13.07□□□□□ -0.32
COL9A2-204ENST00000427563 MED9Q9NWA0 146 aa13.07□□□□□ -0.32
COL9A2-204ENST00000427563 TMEM250H0YL14 139 aa13.06□□□□□ -0.32
COL9A2-204ENST00000427563 SIVA1O15304 175 aa13.06□□□□□ -0.32
COL9A2-204ENST00000427563 NDUFS6O75380 124 aaKnown RBP13.06□□□□□ -0.32
COL9A2-204ENST00000427563 LTAP01374 205 aa13.06□□□□□ -0.32
COL9A2-204ENST00000427563 SRIP30626 198 aa13.06□□□□□ -0.32
COL9A2-204ENST00000427563 RPL35P42766 123 aaKnown RBP13.06□□□□□ -0.32
COL9A2-204ENST00000427563 FABP5P3A8MUU1 101 aa13.05□□□□□ -0.32
COL9A2-204ENST00000427563 ORM1P02763 201 aa13.05□□□□□ -0.32
COL9A2-204ENST00000427563 LINC00315P59091 139 aa13.05□□□□□ -0.32
COL9A2-204ENST00000427563 ZFP30Q9Y2G7 519 aa13.05□□□□□ -0.32
COL9A2-204ENST00000427563 HSPG2P98160 4391 aa13.04□□□□□ -0.32
COL9A2-204ENST00000427563 IGHV3-73A0A0B4J1V6 119 aa13.04□□□□□ -0.32
COL9A2-204ENST00000427563 SH2D1AO60880 128 aa13.04□□□□□ -0.32
COL9A2-204ENST00000427563 WFDC10BQ8IUB3 73 aa13.04□□□□□ -0.32
COL9A2-204ENST00000427563 SLC25A29Q8N8R3 303 aa13.04□□□□□ -0.32
COL9A2-204ENST00000427563 TNFRSF18Q9Y5U5 241 aa13.04□□□□□ -0.32
COL9A2-204ENST00000427563 KRBOX1C9JBD0 128 aa13.03□□□□□ -0.32
COL9A2-204ENST00000427563 SRP19P09132 144 aaKnown RBP13.03□□□□□ -0.32
COL9A2-204ENST00000427563 SRSF3P84103 164 aaKnown RBP13.03□□□□□ -0.32
COL9A2-204ENST00000427563 Q6ZSN1 163 aa13.03□□□□□ -0.32
COL9A2-204ENST00000427563 JPT2Q9H910 190 aa13.03□□□□□ -0.32
COL9A2-204ENST00000427563 RAB19A4D1S5 217 aa13.02□□□□□ -0.33
COL9A2-204ENST00000427563 PEA15Q15121 130 aa13.02□□□□□ -0.33
COL9A2-204ENST00000427563 ZNF674Q2M3X9 581 aa13.02□□□□□ -0.33
COL9A2-204ENST00000427563 CENPWQ5EE01 88 aa13.02□□□□□ -0.33
COL9A2-204ENST00000427563 DNLZQ5SXM8 178 aa13.02□□□□□ -0.33
COL9A2-204ENST00000427563 BAGE2Q86Y30 109 aa13.02□□□□□ -0.33
COL9A2-204ENST00000427563 SMDT1Q9H4I9 107 aa13.02□□□□□ -0.33
COL9A2-204ENST00000427563 B4DEV8 164 aa13.01□□□□□ -0.33
COL9A2-204ENST00000427563 C9JQL5 133 aa13.01□□□□□ -0.33
COL9A2-204ENST00000427563 M0R036 132 aa13.01□□□□□ -0.33
COL9A2-204ENST00000427563 MED14OSP0DP75 135 aa13.01□□□□□ -0.33
COL9A2-204ENST00000427563 UFSP1Q6NVU6 142 aa13.01□□□□□ -0.33
COL9A2-204ENST00000427563 NHLRC2Q8NBF2 726 aa13.01□□□□□ -0.33
COL9A2-204ENST00000427563 MLST8Q9BVC4 326 aa13.01□□□□□ -0.33
COL9A2-204ENST00000427563 PARLQ9H300 379 aa13.01□□□□□ -0.33
COL9A2-204ENST00000427563 APOBP04114 4563 aaKnown RBP13□□□□□ -0.33
COL9A2-204ENST00000427563 TRBV20OR9-2A0A075B6H5 130 aa13□□□□□ -0.33
COL9A2-204ENST00000427563 GRIFINA4D1Z8 144 aa13□□□□□ -0.33
COL9A2-204ENST00000427563 H3BVH4 76 aa13□□□□□ -0.33
COL9A2-204ENST00000427563 BTF3P20290 206 aaKnown RBP13□□□□□ -0.33
COL9A2-204ENST00000427563 ASIPP42127 132 aa13□□□□□ -0.33
COL9A2-204ENST00000427563 SAMD10Q9BYL1 202 aa13□□□□□ -0.33
COL9A2-204ENST00000427563 IL36BQ9NZH7 164 aa13□□□□□ -0.33
COL9A2-204ENST00000427563 TRBV6-4A0A1B0GX49 114 aa12.99□□□□□ -0.33
COL9A2-204ENST00000427563 IGLV2-8P01709 118 aa12.99□□□□□ -0.33
COL9A2-204ENST00000427563 S100A4P26447 101 aaKnown RBP12.99□□□□□ -0.33
COL9A2-204ENST00000427563 GNG4P50150 75 aa12.99□□□□□ -0.33
COL9A2-204ENST00000427563 CEBPGP53567 150 aa12.99□□□□□ -0.33
COL9A2-204ENST00000427563 KRTAP10-2P60368 255 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms