RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 TGP01266 2768 aa11.07□□□□□ -0.64
COL11A1-204ENST00000427239 PLAC8L1A1L4L8 177 aa11.06□□□□□ -0.64
COL11A1-204ENST00000427239 HOXA5P20719 270 aa11.06□□□□□ -0.64
COL11A1-204ENST00000427239 S100A4P26447 101 aaKnown RBP11.06□□□□□ -0.64
COL11A1-204ENST00000427239 TCL1AP56279 114 aa11.06□□□□□ -0.64
COL11A1-204ENST00000427239 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
COL11A1-204ENST00000427239 SPXQ9BT56 116 aa11.06□□□□□ -0.64
COL11A1-204ENST00000427239 TMSB15BA0A087X1C1 80 aa11.06□□□□□ -0.64
COL11A1-204ENST00000427239 DEFB4AO15263 64 aa11.06□□□□□ -0.64
COL11A1-204ENST00000427239 S100A2P29034 98 aa11.06□□□□□ -0.64
COL11A1-204ENST00000427239 EMP1P54849 157 aa11.06□□□□□ -0.64
COL11A1-204ENST00000427239 RPL19P84098 196 aaKnown RBP11.06□□□□□ -0.64
COL11A1-204ENST00000427239 IL36BQ9NZH7 164 aa11.06□□□□□ -0.64
COL11A1-204ENST00000427239 HUWE1Q7Z6Z7 4374 aaKnown RBP11.06□□□□□ -0.64
COL11A1-204ENST00000427239 STAB2Q8WWQ8 2551 aa11.05□□□□□ -0.64
COL11A1-204ENST00000427239 A0A0J9YWU9 116 aa11.05□□□□□ -0.64
COL11A1-204ENST00000427239 A8MWL6 223 aa11.05□□□□□ -0.64
COL11A1-204ENST00000427239 CT83Q5H943 113 aa11.05□□□□□ -0.64
COL11A1-204ENST00000427239 OR10G8Q8NGN5 311 aa11.05□□□□□ -0.64
COL11A1-204ENST00000427239 TEX48A0A1B0GUV7 120 aa11.04□□□□□ -0.64
COL11A1-204ENST00000427239 GRIFINA4D1Z8 144 aa11.04□□□□□ -0.64
COL11A1-204ENST00000427239 LYRM9A8MSI8 78 aa11.04□□□□□ -0.64
COL11A1-204ENST00000427239 SPART-AS1P0CW21 52 aa11.04□□□□□ -0.64
COL11A1-204ENST00000427239 RNASE3P12724 160 aaKnown RBP11.04□□□□□ -0.64
COL11A1-204ENST00000427239 NOP10Q9NPE3 64 aaKnown RBP11.04□□□□□ -0.64
COL11A1-204ENST00000427239 PPP1R2P9O14990 202 aa11.04□□□□□ -0.64
COL11A1-204ENST00000427239 MED14OSP0DP75 135 aa11.04□□□□□ -0.64
COL11A1-204ENST00000427239 LGALS9BQ3B8N2 356 aa11.04□□□□□ -0.64
COL11A1-204ENST00000427239 IL17DQ8TAD2 202 aa11.04□□□□□ -0.64
COL11A1-204ENST00000427239 DKK2Q9UBU2 259 aa11.04□□□□□ -0.64
COL11A1-204ENST00000427239 A0A1W2PPQ1 181 aa11.03□□□□□ -0.64
COL11A1-204ENST00000427239 FAM231BA6NCW3 169 aa11.03□□□□□ -0.64
COL11A1-204ENST00000427239 ARMS2P0C7Q2 107 aa11.03□□□□□ -0.64
COL11A1-204ENST00000427239 C9orf85Q96MD7 179 aa11.03□□□□□ -0.64
COL11A1-204ENST00000427239 SSBP4Q9BWG4 385 aaPredicted RBP11.03□□□□□ -0.64
COL11A1-204ENST00000427239 M0R2P5 195 aa11.02□□□□□ -0.65
COL11A1-204ENST00000427239 OR5AL1P0C617 328 aa11.02□□□□□ -0.65
COL11A1-204ENST00000427239 FAM222AQ5U5X8 452 aa11.02□□□□□ -0.65
COL11A1-204ENST00000427239 TSKUQ8WUA8 353 aa11.02□□□□□ -0.65
COL11A1-204ENST00000427239 PTH2Q96A98 100 aa11.02□□□□□ -0.65
COL11A1-204ENST00000427239 ANAPC16Q96DE5 110 aa11.02□□□□□ -0.65
COL11A1-204ENST00000427239 YPEL4Q96NS1 127 aa11.02□□□□□ -0.65
COL11A1-204ENST00000427239 SCRT2Q9NQ03 307 aa11.02□□□□□ -0.65
COL11A1-204ENST00000427239 V9GYV3 84 aa11.02□□□□□ -0.65
COL11A1-204ENST00000427239 CXorf65A6NEN9 183 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 F2Z2F3 143 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 H3BVH4 76 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 SPINK4O60575 86 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 RASL10AQ92737 203 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 NDUFAF3Q9BU61 184 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 A0A087WWC5 75 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 IGLC6P0CF74 106 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 GZMBP10144 247 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 FOXA3P55318 350 aaPredicted RBP11.01□□□□□ -0.65
COL11A1-204ENST00000427239 PYY3Q5JQD4 70 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 PIK3CD-AS1Q5SR53 167 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 FER1L6-AS1Q8NA97 138 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 EDA2RQ9HAV5 297 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 PHLDA3Q9Y5J5 127 aa11.01□□□□□ -0.65
COL11A1-204ENST00000427239 SNAI2O43623 268 aa11□□□□□ -0.65
COL11A1-204ENST00000427239 RPS10P46783 165 aaKnown RBP11□□□□□ -0.65
COL11A1-204ENST00000427239 ZNF876PQ49A33 203 aa11□□□□□ -0.65
COL11A1-204ENST00000427239 C11orf45Q8TAV5 145 aa11□□□□□ -0.65
COL11A1-204ENST00000427239 TRGV1A0A0A0MS02 117 aa10.99□□□□□ -0.65
COL11A1-204ENST00000427239 Q6ZTI0 123 aa10.99□□□□□ -0.65
COL11A1-204ENST00000427239 CTDSP1Q9GZU7 261 aa10.99□□□□□ -0.65
COL11A1-204ENST00000427239 LINC00612Q8N6U2 182 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 SYT8Q8NBV8 401 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 GTSF1Q8WW33 167 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 TPPP3Q9BW30 176 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 CELA1Q9UNI1 258 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 DEFB130BP0DP73 79 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 DEFB130AP0DP74 79 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 NDUFA6P56556 154 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 DAD1P61803 113 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 LBHQ53QV2 105 aaPredicted RBP10.98□□□□□ -0.65
COL11A1-204ENST00000427239 WDR73Q6P4I2 378 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 LYZL1Q6UWQ5 148 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 C18orf15Q96N68 181 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 TMEM242Q9NWH2 141 aa10.98□□□□□ -0.65
COL11A1-204ENST00000427239 TRGV2A0A075B6R0 118 aa10.97□□□□□ -0.65
COL11A1-204ENST00000427239 SMIM27A0A1W2PRY6 76 aa10.97□□□□□ -0.65
COL11A1-204ENST00000427239 GAGE12BA1L429 117 aa10.97□□□□□ -0.65
COL11A1-204ENST00000427239 HIGD1CA8MV81 97 aa10.97□□□□□ -0.65
COL11A1-204ENST00000427239 GAGE7O76087 117 aa10.97□□□□□ -0.65
COL11A1-204ENST00000427239 GAGE12FP0CL80 117 aa10.97□□□□□ -0.65
COL11A1-204ENST00000427239 GAGE12GP0CL81 117 aa10.97□□□□□ -0.65
COL11A1-204ENST00000427239 GAGE12IP0CL82 117 aa10.97□□□□□ -0.65
COL11A1-204ENST00000427239 PKIAP61925 76 aa10.97□□□□□ -0.65
COL11A1-204ENST00000427239 SPANXN1Q5VSR9 72 aa10.97□□□□□ -0.65
COL11A1-204ENST00000427239 MRPL16Q9NX20 251 aaKnown RBP10.97□□□□□ -0.65
COL11A1-204ENST00000427239 NAT8BQ9UHF3 227 aa10.97□□□□□ -0.65
COL11A1-204ENST00000427239 TSTD3H0UI37 97 aa10.96□□□□□ -0.65
COL11A1-204ENST00000427239 CTRLP40313 264 aa10.96□□□□□ -0.65
COL11A1-204ENST00000427239 CACNG7P62955 275 aa10.96□□□□□ -0.65
COL11A1-204ENST00000427239 C12orf74Q32Q52 190 aa10.96□□□□□ -0.65
COL11A1-204ENST00000427239 DMRTA1Q5VZB9 504 aa10.96□□□□□ -0.65
COL11A1-204ENST00000427239 OR10AG1Q8NH19 301 aa10.96□□□□□ -0.65
COL11A1-204ENST00000427239 C14orf144Q96I85 54 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms