RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 FHL2Q14192 279 aa8.81□□□□□ -1
GPC1-204ENST00000426280 ZNF674Q2M3X9 581 aa8.81□□□□□ -1
GPC1-204ENST00000426280 PRR27Q6MZM9 219 aa8.81□□□□□ -1
GPC1-204ENST00000426280 KRTAP1-5Q9BYS1 174 aa8.81□□□□□ -1
GPC1-204ENST00000426280 SDF2L1Q9HCN8 221 aa8.81□□□□□ -1
GPC1-204ENST00000426280 TRGV11A0A075B6L2 103 aa8.8□□□□□ -1
GPC1-204ENST00000426280 TMSB15BA0A087X1C1 80 aa8.8□□□□□ -1
GPC1-204ENST00000426280 ORM1P02763 201 aa8.8□□□□□ -1
GPC1-204ENST00000426280 SRP19P09132 144 aaKnown RBP8.8□□□□□ -1
GPC1-204ENST00000426280 SFTA3P0C7M3 94 aa8.8□□□□□ -1
GPC1-204ENST00000426280 SRSF3P84103 164 aaKnown RBP8.8□□□□□ -1
GPC1-204ENST00000426280 KCNS1Q96KK3 526 aa8.8□□□□□ -1
GPC1-204ENST00000426280 PARLQ9H300 379 aa8.8□□□□□ -1
GPC1-204ENST00000426280 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
GPC1-204ENST00000426280 GRIFINA4D1Z8 144 aa8.79□□□□□ -1
GPC1-204ENST00000426280 C9JQL5 133 aa8.79□□□□□ -1
GPC1-204ENST00000426280 MGST1P10620 155 aaKnown RBP8.79□□□□□ -1
GPC1-204ENST00000426280 GNG4P50150 75 aa8.79□□□□□ -1
GPC1-204ENST00000426280 RPL19P84098 196 aaKnown RBP8.79□□□□□ -1
GPC1-204ENST00000426280 FAM162BQ5T6X4 162 aa8.79□□□□□ -1
GPC1-204ENST00000426280 ZNF575Q86XF7 245 aa8.79□□□□□ -1
GPC1-204ENST00000426280 ZNF479Q96JC4 524 aa8.79□□□□□ -1
GPC1-204ENST00000426280 HECTD4Q9Y4D8 3996 aa8.79□□□□□ -1
GPC1-204ENST00000426280 PKD1P98161 4303 aa8.78□□□□□ -1
GPC1-204ENST00000426280 B4DEV8 164 aa8.78□□□□□ -1
GPC1-204ENST00000426280 KRBOX1C9JBD0 128 aa8.78□□□□□ -1
GPC1-204ENST00000426280 TMEM250H0YL14 139 aa8.78□□□□□ -1
GPC1-204ENST00000426280 RNASE3P12724 160 aaKnown RBP8.78□□□□□ -1
GPC1-204ENST00000426280 CCL18P55774 89 aa8.78□□□□□ -1
GPC1-204ENST00000426280 LINC00336Q6ZUF6 198 aa8.78□□□□□ -1
GPC1-204ENST00000426280 Q9H8V8 135 aa8.78□□□□□ -1
GPC1-204ENST00000426280 HERC2O95714 4834 aa8.77□□□□□ -1.01
GPC1-204ENST00000426280 H3BNG1 76 aa8.77□□□□□ -1.01
GPC1-204ENST00000426280 CRYBA4P53673 196 aa8.77□□□□□ -1.01
GPC1-204ENST00000426280 FAM3BP58499 235 aaPredicted RBP8.77□□□□□ -1.01
GPC1-204ENST00000426280 TNP2Q05952 138 aa8.77□□□□□ -1.01
GPC1-204ENST00000426280 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
GPC1-204ENST00000426280 OCC1Q8TAD7 63 aa8.77□□□□□ -1.01
GPC1-204ENST00000426280 RASL10AQ92737 203 aa8.77□□□□□ -1.01
GPC1-204ENST00000426280 KIAA1109Q2LD37 5005 aa8.76□□□□□ -1.01
GPC1-204ENST00000426280 DYNC1H1Q14204 4646 aaKnown RBP8.76□□□□□ -1.01
GPC1-204ENST00000426280 K7EN84 100 aa8.76□□□□□ -1.01
GPC1-204ENST00000426280 RAB14P61106 215 aa8.76□□□□□ -1.01
GPC1-204ENST00000426280 LINC01559Q495D7 138 aa8.76□□□□□ -1.01
GPC1-204ENST00000426280 C9orf85Q96MD7 179 aa8.76□□□□□ -1.01
GPC1-204ENST00000426280 SPXQ9BT56 116 aa8.76□□□□□ -1.01
GPC1-204ENST00000426280 LOC100131303A0A0U1RQF7 123 aa8.75□□□□□ -1.01
GPC1-204ENST00000426280 C19orf71A6NCJ1 209 aa8.75□□□□□ -1.01
GPC1-204ENST00000426280 C9JCJ5 164 aa8.75□□□□□ -1.01
GPC1-204ENST00000426280 H3BVH4 76 aa8.75□□□□□ -1.01
GPC1-204ENST00000426280 PAX4O43316 350 aa8.75□□□□□ -1.01
GPC1-204ENST00000426280 S100A4P26447 101 aaKnown RBP8.75□□□□□ -1.01
GPC1-204ENST00000426280 ASIPP42127 132 aa8.75□□□□□ -1.01
GPC1-204ENST00000426280 CLLU1Q5K131 121 aa8.75□□□□□ -1.01
GPC1-204ENST00000426280 HHLA3Q9XRX5 114 aa8.75□□□□□ -1.01
GPC1-204ENST00000426280 ZNF727A8MUV8 499 aa8.74□□□□□ -1.01
GPC1-204ENST00000426280 M0R2P5 195 aa8.74□□□□□ -1.01
GPC1-204ENST00000426280 NDUFS6O75380 124 aaKnown RBP8.74□□□□□ -1.01
GPC1-204ENST00000426280 ARMS2P0C7Q2 107 aa8.74□□□□□ -1.01
GPC1-204ENST00000426280 PEA15Q15121 130 aa8.74□□□□□ -1.01
GPC1-204ENST00000426280 SMIM12Q96EX1 92 aa8.74□□□□□ -1.01
GPC1-204ENST00000426280 SMIM7Q9BQ49 75 aa8.74□□□□□ -1.01
GPC1-204ENST00000426280 UPK3BQ9BT76 320 aa8.74□□□□□ -1.01
GPC1-204ENST00000426280 PRO0255Q9UI72 69 aa8.74□□□□□ -1.01
GPC1-204ENST00000426280 MRPS16Q9Y3D3 137 aaKnown RBP8.74□□□□□ -1.01
GPC1-204ENST00000426280 DNAH11Q96DT5 4516 aa8.74□□□□□ -1.01
GPC1-204ENST00000426280 GZMBP10144 247 aa8.73□□□□□ -1.01
GPC1-204ENST00000426280 ZNF876PQ49A33 203 aa8.73□□□□□ -1.01
GPC1-204ENST00000426280 DNLZQ5SXM8 178 aa8.73□□□□□ -1.01
GPC1-204ENST00000426280 LYPD5Q6UWN5 251 aa8.73□□□□□ -1.01
GPC1-204ENST00000426280 C6orf223Q8N319 242 aa8.73□□□□□ -1.01
GPC1-204ENST00000426280 DAZAP1Q96EP5 407 aaKnown RBP8.73□□□□□ -1.01
GPC1-204ENST00000426280 KRTAP17-1Q9BYP8 105 aa8.73□□□□□ -1.01
GPC1-204ENST00000426280 RNASE7Q9H1E1 156 aaKnown RBP8.73□□□□□ -1.01
GPC1-204ENST00000426280 TNFRSF18Q9Y5U5 241 aa8.73□□□□□ -1.01
GPC1-204ENST00000426280 TRGV4A0A0C4DH28 118 aa8.72□□□□□ -1.01
GPC1-204ENST00000426280 K7EQD1 137 aa8.72□□□□□ -1.01
GPC1-204ENST00000426280 NUDT10Q8NFP7 164 aa8.72□□□□□ -1.01
GPC1-204ENST00000426280 OR2D3Q8NGH3 330 aa8.72□□□□□ -1.01
GPC1-204ENST00000426280 NUDT11Q96G61 164 aa8.72□□□□□ -1.01
GPC1-204ENST00000426280 IL36BQ9NZH7 164 aa8.72□□□□□ -1.01
GPC1-204ENST00000426280 MUC21A0A0G2JKD1 596 aa8.71□□□□□ -1.02
GPC1-204ENST00000426280 MUC21A0A140T8X8 626 aa8.71□□□□□ -1.02
GPC1-204ENST00000426280 P01737 135 aa8.71□□□□□ -1.02
GPC1-204ENST00000426280 DMRTA1Q5VZB9 504 aa8.71□□□□□ -1.02
GPC1-204ENST00000426280 Q6ZSN1 163 aa8.71□□□□□ -1.02
GPC1-204ENST00000426280 JPT2Q9H910 190 aa8.71□□□□□ -1.02
GPC1-204ENST00000426280 ICOSQ9Y6W8 199 aa8.71□□□□□ -1.02
GPC1-204ENST00000426280 IGHV3-73A0A0B4J1V6 119 aa8.7□□□□□ -1.02
GPC1-204ENST00000426280 TRAV4A0A0B4J268 109 aa8.7□□□□□ -1.02
GPC1-204ENST00000426280 GYPEP15421 78 aa8.7□□□□□ -1.02
GPC1-204ENST00000426280 SSTP61278 116 aa8.7□□□□□ -1.02
GPC1-204ENST00000426280 LINC01551Q86U37 167 aa8.7□□□□□ -1.02
GPC1-204ENST00000426280 OR4C5Q8NGB2 326 aa8.7□□□□□ -1.02
GPC1-204ENST00000426280 SMDT1Q9H4I9 107 aa8.7□□□□□ -1.02
GPC1-204ENST00000426280 SCRT2Q9NQ03 307 aa8.7□□□□□ -1.02
GPC1-204ENST00000426280 BIN3Q9NQY0 253 aa8.7□□□□□ -1.02
GPC1-204ENST00000426280 M0R381 172 aa8.69□□□□□ -1.02
GPC1-204ENST00000426280 RS1O15537 224 aa8.69□□□□□ -1.02
GPC1-204ENST00000426280 NXPH4O95158 308 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms