RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 MAPKAPK5-AS1Q8N8E1 139 aa10.24□□□□□ -0.77
USP42-203ENST00000426246 RNF5Q99942 180 aa10.24□□□□□ -0.77
USP42-203ENST00000426246 KNCNA6PVL3 124 aa10.24□□□□□ -0.77
USP42-203ENST00000426246 M0R1W7 72 aa10.24□□□□□ -0.77
USP42-203ENST00000426246 CRXO43186 299 aaPredicted RBP10.24□□□□□ -0.77
USP42-203ENST00000426246 ZNF56Q15929 161 aa10.24□□□□□ -0.77
USP42-203ENST00000426246 RNASE13Q5GAN3 156 aaKnown RBP10.24□□□□□ -0.77
USP42-203ENST00000426246 A0A1B0GW15 77 aa10.23□□□□□ -0.77
USP42-203ENST00000426246 IGHG4P01861 327 aa10.23□□□□□ -0.77
USP42-203ENST00000426246 DUX3Q96PT4 197 aa10.23□□□□□ -0.77
USP42-203ENST00000426246 NXT2Q9NPJ8 142 aaKnown RBP10.23□□□□□ -0.77
USP42-203ENST00000426246 SEC11AP67812 179 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 LGALS9BQ3B8N2 356 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 LGALS9CQ6DKI2 356 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 NPBQ8NG41 125 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 RNF185Q96GF1 192 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 C20orf173Q96LM9 149 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 C9orf118A6NHY6 69 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 PSMG4Q5JS54 123 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 OR4X2Q8NGF9 303 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 RHPN1-AS1Q9BWJ2 59 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 CSTL1Q9H114 145 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 A0A0U1RRA0 63 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 CENPVL3A0A0U1RRI6 287 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 ASIPP42127 132 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 C1orf122Q6ZSJ8 110 aa10.22□□□□□ -0.77
USP42-203ENST00000426246 IGHV4-61A0A0C4DH41 118 aa10.21□□□□□ -0.77
USP42-203ENST00000426246 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.77
USP42-203ENST00000426246 ODF1Q14990 250 aa10.21□□□□□ -0.77
USP42-203ENST00000426246 FAM159AQ6UWV7 190 aa10.21□□□□□ -0.77
USP42-203ENST00000426246 ZNF479Q96JC4 524 aa10.21□□□□□ -0.77
USP42-203ENST00000426246 OPRPNQ99935 248 aaPredicted RBP10.21□□□□□ -0.77
USP42-203ENST00000426246 MRPL16Q9NX20 251 aaKnown RBP10.21□□□□□ -0.77
USP42-203ENST00000426246 NBEAL2Q6ZNJ1 2754 aa10.21□□□□□ -0.77
USP42-203ENST00000426246 ADARB2-AS1A8MUL3 147 aa10.21□□□□□ -0.77
USP42-203ENST00000426246 SIRPDQ9H106 197 aa10.21□□□□□ -0.77
USP42-203ENST00000426246 TEX48A0A1B0GUV7 120 aa10.21□□□□□ -0.78
USP42-203ENST00000426246 ZNF815PA8K554 130 aa10.21□□□□□ -0.78
USP42-203ENST00000426246 FGF6P10767 208 aa10.21□□□□□ -0.78
USP42-203ENST00000426246 WFDC2Q14508 124 aa10.21□□□□□ -0.78
USP42-203ENST00000426246 Q1RN00 199 aa10.21□□□□□ -0.78
USP42-203ENST00000426246 DPF1Q92782 380 aa10.21□□□□□ -0.78
USP42-203ENST00000426246 CHTOPQ9Y3Y2 248 aaKnown RBP10.21□□□□□ -0.78
USP42-203ENST00000426246 PRSS2P07478 247 aa10.2□□□□□ -0.78
USP42-203ENST00000426246 FAM110DQ8TAY7 271 aaPredicted RBP10.2□□□□□ -0.78
USP42-203ENST00000426246 AJUBAQ96IF1 538 aa10.2□□□□□ -0.78
USP42-203ENST00000426246 A0A1B0GWB2 263 aa10.2□□□□□ -0.78
USP42-203ENST00000426246 BOD1L2Q8IYS8 172 aa10.2□□□□□ -0.78
USP42-203ENST00000426246 HLA-DRB4P13762 266 aa10.2□□□□□ -0.78
USP42-203ENST00000426246 SLC50A1Q9BRV3 221 aa10.2□□□□□ -0.78
USP42-203ENST00000426246 NPFFR1Q9GZQ6 430 aa10.2□□□□□ -0.78
USP42-203ENST00000426246 HLA-DRB4X5D2U9 266 aa10.2□□□□□ -0.78
USP42-203ENST00000426246 A0A1W2PPM0 123 aa10.19□□□□□ -0.78
USP42-203ENST00000426246 SLC25A16P16260 332 aa10.19□□□□□ -0.78
USP42-203ENST00000426246 PSMB2P49721 201 aa10.19□□□□□ -0.78
USP42-203ENST00000426246 UBE2E1P51965 193 aa10.19□□□□□ -0.78
USP42-203ENST00000426246 SPINK13Q1W4C9 94 aa10.19□□□□□ -0.78
USP42-203ENST00000426246 ADAMTSL5Q6ZMM2 481 aa10.19□□□□□ -0.78
USP42-203ENST00000426246 NIPBLQ6KC79 2804 aaeCLIP10.19□□□□□ -0.78
USP42-203ENST00000426246 C2orf66Q6UXQ4 117 aa10.19□□□□□ -0.78
USP42-203ENST00000426246 CCL19Q99731 98 aa10.19□□□□□ -0.78
USP42-203ENST00000426246 APCP25054 2843 aa10.19□□□□□ -0.78
USP42-203ENST00000426246 IGLC6P0CF74 106 aa10.19□□□□□ -0.78
USP42-203ENST00000426246 ATP5LO75964 103 aa10.18□□□□□ -0.78
USP42-203ENST00000426246 PPBPP02775 128 aa10.18□□□□□ -0.78
USP42-203ENST00000426246 FASNP49327 2511 aaKnown RBP10.18□□□□□ -0.78
USP42-203ENST00000426246 TRAV8-2A0A0B4J237 113 aa10.18□□□□□ -0.78
USP42-203ENST00000426246 DUSP14O95147 198 aaKnown RBP10.18□□□□□ -0.78
USP42-203ENST00000426246 DEFB136Q30KP8 78 aa10.18□□□□□ -0.78
USP42-203ENST00000426246 OR9G4Q8NGQ1 327 aa10.18□□□□□ -0.78
USP42-203ENST00000426246 SUMO2P61956 95 aaKnown RBP10.18□□□□□ -0.78
USP42-203ENST00000426246 ZFAND3Q9H8U3 227 aa10.18□□□□□ -0.78
USP42-203ENST00000426246 CDKN1BP46527 198 aa10.17□□□□□ -0.78
USP42-203ENST00000426246 CLEC2AQ6UVW9 174 aa10.17□□□□□ -0.78
USP42-203ENST00000426246 C10orf105Q8TEF2 133 aa10.17□□□□□ -0.78
USP42-203ENST00000426246 RAX2Q96IS3 184 aa10.17□□□□□ -0.78
USP42-203ENST00000426246 CLPSL1A2RUU4 121 aa10.17□□□□□ -0.78
USP42-203ENST00000426246 H3BRM9 83 aa10.17□□□□□ -0.78
USP42-203ENST00000426246 MINOS1Q5TGZ0 78 aa10.17□□□□□ -0.78
USP42-203ENST00000426246 ZNF493Q6ZR52 646 aa10.17□□□□□ -0.78
USP42-203ENST00000426246 Q8N8P6 123 aa10.17□□□□□ -0.78
USP42-203ENST00000426246 PGPEP1Q9NXJ5 209 aa10.17□□□□□ -0.78
USP42-203ENST00000426246 MINOS1-NBL1R4GNA1 71 aa10.17□□□□□ -0.78
USP42-203ENST00000426246 PRSS29PA6NIE9 313 aa10.16□□□□□ -0.78
USP42-203ENST00000426246 SYNJ2BPP57105 145 aa10.16□□□□□ -0.78
USP42-203ENST00000426246 K7EP34 96 aa10.16□□□□□ -0.78
USP42-203ENST00000426246 TP53TG1Q9Y2A0 90 aa10.16□□□□□ -0.78
USP42-203ENST00000426246 MXRA5Q9NR99 2828 aa10.16□□□□□ -0.78
USP42-203ENST00000426246 PRADC1Q9BSG0 188 aa10.16□□□□□ -0.78
USP42-203ENST00000426246 MOB4Q9Y3A3 225 aa10.16□□□□□ -0.78
USP42-203ENST00000426246 TRAV21A0A0B4J279 112 aa10.15□□□□□ -0.78
USP42-203ENST00000426246 PTH2Q96A98 100 aa10.15□□□□□ -0.78
USP42-203ENST00000426246 SMIM2Q9BVW6 85 aa10.15□□□□□ -0.78
USP42-203ENST00000426246 AKAP9Q99996 3911 aa10.15□□□□□ -0.78
USP42-203ENST00000426246 IGHV4-30-2A0A087WSY4 118 aa10.15□□□□□ -0.79
USP42-203ENST00000426246 A0A1W2PRX2 142 aa10.15□□□□□ -0.79
USP42-203ENST00000426246 LINC01549A6NIU2 74 aa10.15□□□□□ -0.79
USP42-203ENST00000426246 SRSF8Q9BRL6 282 aaKnown RBP10.15□□□□□ -0.79
USP42-203ENST00000426246 C5orf56Q8N8D9 126 aa10.14□□□□□ -0.79
USP42-203ENST00000426246 TSSC4Q9Y5U2 329 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms